41 research outputs found
No strong associations between temperature and the host-parasite interaction in wild stickleback
As climate change progresses, thermal stress is expected to alter the way that host organisms respond to infections by pathogens and parasites, with consequences for the fitness and hence population processes of both host and parasite. We used a correlational natural experiment to examine how temperature differences shape the impact of the cestode parasite Schistocephalus solidus on its host, the three-spined stickleback (Gasterosteus aculeatus). Previous laboratory work has found that high temperatures benefit S. solidus while being detrimental to the stickleback. Our study sought to emulate this design in the wild, repeatedly sampling naturally infected and uninfected fish at matched warmer and cooler locations in the Baltic Sea. In our wild study, we found little evidence that temperature was associated with the host-parasite interaction. While infection reduced host condition and reproductive status overall, these effects did not vary with temperature. Host fitness indicators correlated to some extent with temperature, with cooler capture sites associated with larger size but warmer sites with improved reproductive potential. Parasite fitness (prevalence or size) was not correlated with temperature at the capture site. These mismatches between laboratory and field outcomes illustrate how findings from well-controlled laboratory experiments may not fully reflect processes in more variable natural settings. Nonetheless, our findings indicate that temperature can influence host fitness regardless of infection, with potential consequences for both host demography and parasite transmission dynamics in this complex system.Peer reviewe
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What Happens Next? Event Prediction Using a Compositional Neural Network Model
We address the problem of automatically acquiring knowledge of event sequences from text, with the aim of providing a predictive model for use in narrative generation systems. We present a neural network model that simultaneously learns embeddings for words describing events, a function to compose the embeddings into a representation of the event, and a coherence function to predict the strength of association between two events. We introduce a new development of the narrative cloze evaluation task, better suited to a setting where rich information about events is available. We compare models that learn vector-space representations of the events denoted by verbs in chains centering on a single protagonist. We find that recent work on learning vector-space embeddings to capture word meaning can be effectively applied to this task, including simple incorporation of a verb's arguments in the representation by vector addition. These representations provide a good initialization for learning the richer, compositional model of events with a neural network, vastly outperforming a number of baselines and competitive alternatives
Segregation in space and time explains the coexistence of two sympatric sub-Antarctic petrels
Biological communities are shaped by competition between and within species. Competition is often reduced by inter- and intraspecific specialization on resources, such as differencet foraging areas or time, allowing similar species to coexist and potentially contributing to reproductive isolation. Here, we examine the simultaneous role of temporal and spatial foraging segregation within and between two sympatric sister species of seabirds, Northern Macronectes halli and Southern Macronectes giganteus Giant Petrels. These species show marked sexual size dimorphism and allochrony (with earlier breeding by Northern Giant Petrels) but this is the first study to test for differences in foraging behaviours and areas across the entire breeding season both between the two species and between the sexes. We tracked males and females of both species in all breeding stages at Bird Island, South Georgia, to test how foraging distribution, behaviour and habitat use vary between and within species in biological time (incubation, brood-guard or post-brood stages) and in absolute time (calendar date). Within each breeding stage, both species took trips of comparable duration to similar areas, but due to breeding allochrony they segregated temporally. Northern Giant Petrels had a somewhat smaller foraging range than Southern Giant Petrels, reflecting their greater exploitation of local carrion and probably contributing to their recent higher population growth. Within species, segregation was spatial, with females generally taking longer, more pelagic trips than males, although both sexes of both species showed unexpectedly plastic foraging behaviour. There was little evidence of interspecific differences in habitat use. Thus, in giant petrels, temporal segregation reduces interspecific competition and sexual segregation reduces intraspecific competition. These results demonstrate how both specialization and dynamic changes in foraging strategies at different scales underpin resource division within a community
CoSimLex : A Resource for Evaluating Graded Word Similarity in Context
State of the art natural language processing tools are built on context-dependent word embeddings, but no direct method for evaluating these representations currently exists. Standard tasks and datasets for intrinsic evaluation of embeddings are based on judgements of similarity, but ignore context; standard tasks for word sense disambiguation take account of context but do not provide continuous measures of meaning similarity. This paper describes an effort to build a new dataset, CoSimLex, intended to fill this gap. Building on the standard pairwise similarity task of SimLex-999, it provides context-dependent similarity measures; covers not only discrete differences in word sense but more subtle, graded changes in meaning; and covers not only a well-resourced language (English) but a number of less-resourced languages. We define the task and evaluation metrics, outline the dataset collection methodology, and describe the status of the dataset so far.Peer reviewe
Between-individual variation in nematode burden among juveniles in a wild host:Variation in nematode burdens of juvenile birds
Parasite infection in young animals can affect host traits related to demographic processes such as survival and reproduction, and is therefore crucial to population viability. However, variation in infection among juvenile hosts is poorly understood. Experimental studies have indicated that effects of parasitism can vary with host sex, hatching order and hatch date, yet it remains unclear whether this is linked to differences in parasite burdens. We quantified gastrointestinal nematode burdens of wild juvenile European shags (Phalacrocorax aristotelis) using two in situ measures (endoscopy of live birds and necropsy of birds that died naturally) and one non-invasive proxy measure (fecal egg counts (FECs)). In situ methods revealed that almost all chicks were infected (98%), that infections established at an early age and that older chicks hosted more worms, but FECs underestimated prevalence. We found no strong evidence that burdens differed with host sex, rank or hatch date. Heavier chicks had higher burdens, demonstrating that the relationship between burdens and their costs is not straightforward. In situ measures of infection are therefore a valuable tool in building our understanding of the role that parasites play in the dynamics of structured natural populations
Home ground advantage: Local Atlantic salmon have higher reproductive fitness than dispersers in the wild
A long-held, but poorly tested, assumption in natural populations is that individuals that disperse into new areas for reproduction are at a disadvantage compared to individuals that reproduce in their natal habitat, underpinning the eco-evolutionary processes of local adaptation and ecological speciation. Here, we capitalize on fine-scale population structure and natural dispersal events to compare the reproductive success of local and dispersing individuals captured on the same spawning ground in four consecutive parent-offspring cohorts of wild Atlantic salmon (Salmo salar). Parentage analysis conducted on adults and juvenile fish showed that local females and males had 9.6 and 2.9 times higher reproductive success than dispersers, respectively. Our results reveal how higher reproductive success in local spawners compared to dispersers may act in natural populations to drive population divergence and promote local adaptation over microgeographic spatial scales without clear morphological differences between populations
Non-invasive genetic monitoring involving citizen science enables reconstruction of current pack dynamics in a re-establishing wolf population
Background: Carnivores are re-establishing in many human-populated areas, where their presence is often contentious. Reaching consensus on management decisions is often hampered by a dispute over the size of the local carnivore population. Understanding the reproductive dynamics and individual movements of the carnivores can provide support for management decisions, but individual-level information can be difficult to obtain from elusive, wideranging species. Non-invasive genetic sampling can yield such information, but makes subsequent reconstruction of population history challenging due to incomplete population coverage and error-prone data. Here, we combine a collaborative, volunteer-based sampling scheme with Bayesian pedigree reconstruction to describe the pack dynamics of an establishing grey wolf (Canis lupus) population in south-west Finland, where wolf breeding was recorded in 2006 for the first time in over a century.Results: Using DNA extracted mainly from faeces collected since 2008, we identified 81 individual wolves and assigned credible full parentages to 70 of these and partial parentages to a further 9, revealing 7 breeding pairs. Individuals used a range of strategies to obtain breeding opportunities, including dispersal to established or new packs, long-distance migration and inheriting breeding roles. Gene flow occurred between all packs but inbreeding events were rare.Conclusions: These findings demonstrate that characterizing ongoing pack dynamics can provide detailed, locally-relevant insight into the ecology of contentious species such as the wolf. Involving various stakeholders in data collection makes these results more likely to be accepted as unbiased and hence reliable grounds for management decisions
On the Complex Network Structure of Musical Pieces: Analysis of Some Use Cases from Different Music Genres
This paper focuses on the modeling of musical melodies as networks. Notes of
a melody can be treated as nodes of a network. Connections are created whenever
notes are played in sequence. We analyze some main tracks coming from different
music genres, with melodies played using different musical instruments. We find
out that the considered networks are, in general, scale free networks and
exhibit the small world property. We measure the main metrics and assess
whether these networks can be considered as formed by sub-communities. Outcomes
confirm that peculiar features of the tracks can be extracted from this
analysis methodology. This approach can have an impact in several multimedia
applications such as music didactics, multimedia entertainment, and digital
music generation.Comment: accepted to Multimedia Tools and Applications, Springe
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Helminth burden and ecological factors associated with alterations in wild host gastrointestinal microbiota
Infection by gastrointestinal helminths of humans, livestock and wild animals is common, but the impact of such endoparasites on wild hosts and their gut microbiota represents an important overlooked component of population dynamics. Wild host gut microbiota and endoparasites occupy the same physical niche spaces with both affecting host nutrition and health. However, associations between the two are poorly understood. Here we used the commonly parasitized European shag (Phalacrocorax aristotelis) as a model wild host. Forty live adults from the same colony were sampled. Endoscopy was employed to quantify helminth infection in situ. Microbiota from the significantly distinct proventriculus (site of infection), cloacal and faecal gastrointestinal tract microbiomes were characterised using 16S rRNA gene-targeted high-throughput sequencing. We found increasingly strong associations between helminth infection and microbiota composition progressing away from the site of infection, observing a pronounced dysbiosis in microbiota when samples were partitioned into high- and low-burden groups. We posit this dysbiosis is predominately explained by helminths inducing an anti-inflammatory environment in the proventriculus, diverting host immune responses away from themselves. This study, within live wild animals, provides a vital foundation to better understand the mechanisms that underpin the three-way relationship between helminths, microbiota and hosts
Impacts of Parasites in Early Life: Contrasting Effects on Juvenile Growth for Different Family Members
Parasitism experienced early in ontogeny can have a major impact on host growth, development and future fitness, but whether siblings are affected equally by parasitism is poorly understood. In birds, hatching asynchrony induced by hormonal or behavioural mechanisms largely under parental control might predispose young to respond to infection in different ways. Here we show that parasites can have different consequences for offspring depending on their position in the family hierarchy. We experimentally treated European Shag (Phalacrocorax aristoteli) nestlings with the broad-spectrum anti-parasite drug ivermectin and compared their growth rates with nestlings from control broods. Average growth rates measured over the period of linear growth (10 days to 30 days of age) and survival did not differ for nestlings from treated and control broods. However, when considering individuals within broods, parasite treatment reversed the patterns of growth for individual family members: last-hatched nestlings grew significantly slower than their siblings in control nests but grew faster in treated nests. This was at the expense of their earlier-hatched brood-mates, who showed an overall growth rate reduction relative to last-hatched nestlings in treated nests. These results highlight the importance of exploring individual variation in the costs of infection and suggest that parasites could be a key factor modulating within-family dynamics, sibling competition and developmental trajectories from an early age