Community metagenomic assembly reveals microbes that contribute to the vertical stratification of nitrogen cycling in an aquaculture pond

The identities and functional capacities of the microbial populations within surface water (SW), bottom water (BW), surface sediment (SS) and deep sediment (DS) samples from a typical grass carp (Ctenopharyngodon idellus) culturing pond in central China were explored using metagenomics. In total, the community structure and microbial processes of the water columns was distinct from that of the SS and DS layers. Alphaproteobacteria, Actinobacteria, Cyanobacteria and Planctomycetes were abundant in the water, while Deltaproteobacteria, Gammaproteobacteria, Euryarchaeota (Archaea) and Nitrospirae were more abundant in the sediment (P < .05). The functional potential and microorganisms responsible for the N nutrient cycles were also reconstructed in silico. The high functional potential for N assimilation, protein synthesis and cell proliferation in pond water should be responsible for low ammonia concentration detected. Ammonia oxidation functional genes were present in very low abundances, and were mostly detected in the water columns and related to Nitrosomonas (100%). Denitrification were observed mostly in SS and the main taxon involved was Rhodocyclales. The potential for N fixation (nif genes) and dissimilatory nitrate reduction to ammonium was also observed mostly in sediment, which is a disadvantage for ammonia reduction in the pond ecosystem. Overall, these results offer a more detailed perspective on the microbial functional ecology of the aquaculture pond

Effect of Carbon to Nitrogen Ratio on Water Quality and Community Structure Evolution in Suspended Growth Bioreactors through Biofloc Technology

Application of biofloc technology could effectively treat wastewater. However, the effect of influent carbon to nitrogen ratio (C/N ratio) on water quality and microbial community structure evolution in suspended growth bioreactors (SGBRs) through biofloc technology is still unclear. Here, we show that the total ammonia nitrogen (TAN) and nitrite nitrogen in the effluent of the C/N 10 treatment was significantly higher than that in the C/N 15, C/N 20 and C/N 25 treatments (p &lt; 0.05). Higher TAN removal efficiency was obtained in treatments of C/N 15, C/N 20 and C/N 25, and there was no accumulation of nitrite nitrogen and nitrate nitrogen. Increasing the C/N ratio strengthened the elimination ability of total phosphorus and chemical oxygen demand (COD). The concentrations of TAN and COD first dropped to the lowest level and then increased slightly within one cycle in all treatments. The accumulation of biomass in the reactors increased with the increasing C/N ratio, indicating that a higher C/N ratio was conducive to microbial proliferation. The 16S rRNA sequencing revealed that the microbial community diversity in SGBRs was significantly higher than that in the natural wastewater (P0). The predominant phylum were Proteobacteria, Bacteroidetes and Verrucomicrobia, but Saccharibacteria occupied a dominant position in the late period of the experiment. Pathogens, such as Aeromonas, Acidovorax, Flavobacterium, and Malikia were significantly decreased after high C/N ratio simulative wastewater treating natural wastewater in the reactors. In summary, the water quality and biomass concentrations in SGBRs can be improved under the conditions of influent C/N ratio, equal to or greater than 15

The Anti-Inflammatory Activity of Toonaciliatin K against Adjuvant Arthritis

Toonaciliatin K is a natural limonoid purified from the Toona ciliata Roem. var. ciliata (Meliaceae). This study is to reveal the inflammatory suppression effect of toonaciliatin K and further the intrinsic mechanism. Firstly, anti-inflammatory effect of toonaciliatin K was evaluated in lipopolysaccharide- (LPS-) induced RAW264.7 cells. RT-PCR results indicated that the mRNA expressions of TNF-α, IL-6, and IL-1β were downregulated by toonaciliatin K. The toonaciliatin K inhibited TNF-α, IL-6, and IL-1β levels stimulated by LPS. Furthermore, LPS elicited the excess iNOS and COX-2 mRNA and protein production and toonaciliatin K attenuated the excess production. Western blot assay demonstrated that MAPK and NF-κB signaling pathways play critical roles in the toonaciliatin K’s anti-inflammatory activity. Secondly, toonaciliatin K inhibited carrageenan-induced paw edema in rats. Thirdly, toonaciliatin K alleviated the paw swelling and improved arthritis clinical scores in the adjuvant arthritis rats. Toonaciliatin K decreased the proinflammatory cytokines levels and Mankin scores in adjuvant arthritis rats. The HE staining, safranin O-fast green, and toluidine blue staining results demonstrated that toonaciliatin K alleviated the histological changes of paw, for example, pannus formation, focal loss of cartilage, bone erosion, and presence of extra-articular inflammation. Hence, toonaciliatin K is a promising agent for treatment of arthritis