Technology and teaching in higher education: A simulation applied to the integration of concepts taught in postgraduate courses

Introducción: El objetivo de este trabajo fue implementar tecnologías de la información y la comunicación (TIC) a nivel de posgrado. En este caso particular se usó USINA, un simulador para la toma de decisiones diseñado por el Centro de Innovaciones en Tecnología y Pedagogía (CITEP), de la Universidad de Buenos Aires. Ésta permite trabajar con narraciones, estudio de casos y utilizar el “error” como método pedagógico. Métodos: 1) Diseñar una secuencia de pantallas para ser montadas en USINA utilizándola como herramienta de integración de conceptos en dos cursos de posgrado: Downstream Processing de proteínas (DSP) y Aplicaciones, Síntesis y Análisis de Péptidos Sintéticos (ASAP). 2) Aplicar una encuesta anónima para evaluar la eficiencia de USINA. 3) Realizar una clase presencial para intercambiar opiniones sobre la experiencia. Resultados y Discusión: En ambos cursos (DSP y ASAP) la experiencia resultó exitosa. El alumnado consideró que el uso de USINA permitió el andamiaje de conocimientos y la integración de conceptos al situarlo en el rol de experto. El uso de las TIC en los niveles educativos superiores sigue siendo una asignatura pendiente. A través de la experiencia aquí analizada, se abre la posibilidad de llevar esta herramienta a cursos de pregrado y con mayor número de estudiantesIntroduction: The aim of this work was to implement information and communication technologies (ICTs) at postgraduate level. In this particular case, USINA, a decision-making simulator designed by the Center for Innovation in Technology and Education (CITEP), of the University of Buenos Aires, was used. It allows working with stories, case studies and uses the "error" as a teaching method. Methods: 1) Design a sequence of screens to be mounted in the USINA platform to use it as a tool for the integration of concepts in two postgraduate courses: Protein Downstream Processing (DSP) and Applications, Synthesis and Analysis of Synthetic Peptides (ASAP). 2) Apply anonymous quiz to evaluate the efficiency of USINA. 3) Perform a class attendance to exchange opinions on the experience. Results: During both courses (DSP and ASAP) the experience was very successful. The students felt that the use of USINA enhanced learning and helped integrating concepts by situating them in the role of experts. Discussion: The use of ICTs in higher levels of education remains a pending issue. Through the experience here analyzed the possibility to bring this tool to undergraduate courses and more students is opene

Ethylenediaminetetraacetic Acid (EDTA) as an Auxiliary Tool in the Electrospray Ionization Mass Spectrometry Analysis of Native and Derivatized β-Cyclodextrins, Maltoses, and Fructans Contaminated with Ca and/or Mg

The effect of Ca2+ (and Mg2+) and the disodium salt of ethylenediaminetetraacetic acid (EDTA), a well known Ca2+ (and Mg2+) chelating agent, on the volatilization/ionization of carbohydrates by using electrospray ionization mass spectrometry has been studied. Model compounds such as maltoses (maltose to maltoheptaose), β-cyclodextrins (β-cyclodextrin, methyl-β-cyclodextrin, heptakis(2,6-di-O-methyl)-β-cyclodextrin, heptakis(2,3,6-tri-O-methyl)-β-cyclodextrin, and 2-hydroxypropyl-β-cyclodextrin) and fructans (sucrose, 1-ketose, nystose, and 1F-fructofuranosylnystose) were used

Las tecnologías y la enseñanza en la educación superior. Un simulador aplicado a la integración de conceptos enseñados en cursos de posgrado

Introduction: The aim of this work was to implement information and communication technologies (ICTs) at postgraduate level. In this particular case, USINA, a decision-making simulator designed by the Center for Innovation in Technology and Education (CITEP), of the University of Buenos Aires, was used. It allows working with stories, case studies and uses the "error" as a teaching method. Methods: 1) Design a sequence of screens to be mounted in the USINA platform to use it as a tool for the integration of concepts in two postgraduate courses: Protein Downstream Processing (DSP) and Applications, Synthesis and Analysis of Synthetic Peptides (ASAP). 2) Apply anonymous quiz to evaluate the efficiency of USINA. 3) Perform a class attendance to exchange opinions on the experience. Results: During both courses (DSP and ASAP) the experience was very successful. The students felt that the use of USINA enhanced learning and helped integrating concepts by situating them in the role of experts. Discussion: The use of ICTs in higher levels of education remains a pending issue. Through the experience here analyzed the possibility to bring this tool to undergraduate courses and more students is opened.Introducción: El objetivo de este trabajo fue implementar tecnologías de la información y la comunicación (TIC) a nivel de posgrado. En este caso particular se usó USINA, un simulador para la toma de decisiones diseñado por el Centro de Innovaciones en Tecnología y Pedagogía (CITEP), de la Universidad de Buenos Aires. Ésta permite trabajar con narraciones, estudio de casos y utilizar el “error” como método pedagógico. Métodos: 1) Diseñar una secuencia de pantallas para ser montadas en USINA utilizándola como herramienta de integración de conceptos en dos cursos de posgrado: Downstream Processing de proteínas (DSP) y Aplicaciones, Síntesis y Análisis de Péptidos Sintéticos (ASAP). 2) Aplicar una encuesta anónima para evaluar la eficiencia de USINA. 3) Realizar una clase presencial para intercambiar opiniones sobre la experiencia. Resultados y Discusión: En ambos cursos (DSP y ASAP) la experiencia resultó exitosa. El alumnado consideró que el uso de USINA permitió el andamiaje de conocimientos y la integración de conceptos al situarlo en el rol de experto. El uso de las TIC en los niveles educativos superiores sigue siendo una asignatura pendiente. A través de la experiencia aquí analizada, se abre la posibilidad de llevar esta herramienta a cursos de pregrado y con mayor número de estudiantes

An inhibitory mechanism of action of coiled‐coil peptides against type three secretion system from enteropathogenic Escherichia coli

Human pathogenic gram‐negative bacteria, such as enteropathogenic Escherichia coli (EPEC), rely on type III secretion systems (T3SS) to translocate virulence factors directly into host cells. The coiled‐coil domains present in the structural proteins of T3SS are conformed by amphipathic alpha‐helical structures that play an important role in the protein‐protein interaction and are essential for the assembly of the translocation complex. To investigate the inhibitory capacity of these domains on the T3SS of EPEC, we synthesized peptides between 7 and 34 amino acids based on the coiled‐coil domains of proteins that make up this secretion system. This analysis was performed through in vitro hemolysis assays by assessing the reduction of T3SS‐dependent red blood cell lysis in the presence of the synthesized peptides. After confirming its inhibitory capacity, we performed molecular modeling assays using combined techniques, docking‐molecular dynamic simulations, and quantum‐mechanic calculations of the various peptide‐protein complexes, to improve the affinity of the peptides to the target proteins selected from T3SS. These techniques allowed us to demonstrate that the peptides with greater inhibitory activity, directed against the coiled‐coil domain of the C‐terminal region of EspA, present favorable hydrophobic and hydrogen bond molecular interactions. Particularly, the hydrogen bond component is responsible for the stabilization of the peptide‐protein complex. This study demonstrates that compounds targeting T3SS from pathogenic bacteria can indeed inhibit bacterial infection by presenting a higher specificity than broad‐spectrum antibiotics. In turn, these peptides could be taken as initial structures to design and synthesize new compounds that mimic their inhibitory pharmacophoric pattern.Instituto de BiotecnologíaFil: Larzabal, Mariano.Instituto Nacional de Tecnología Agropecuaria (INTA). UEDD IABIMO. Instituto de Agrobiotecnología y Biología Molecular. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Baldoni, Hector A. Universidad Nacional de San Luis. Facultad de Química, Bioquímica y Farmacia. Instituto de Matemática Aplicada San Luis; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Suvire, Fernando D. Universidad Nacional de San Luis. Facultad de Química, Bioquímica y Farmacia. Instituto Multidisciplinario de Investigaciones Biológicas; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Curto, Lucrecia M. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica. Departamento de Química Biológica; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Gomez, Gabriela E. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica. Departamento de Química Biológica; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Marques Da Silva, Wanderson. Instituto Nacional de Tecnología Agropecuaria (INTA). UEDD IABIMO. Instituto de Agrobiotecnología y Biología Molecular. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Giudicessi, Silvana L. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica. Cátedra de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Camperi, Silvia A. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica. Cátedra de Biotecnología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Delfino, Jose M. Universidad de Buenos Aires. Facultad de Farmacia y Bioquímica. Departamento de Química Biológica; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Cataldi, Angel Adrian. Instituto Nacional de Tecnología Agropecuaria (INTA). UEDD IABIMO. Instituto de Agrobiotecnología y Biología Molecular. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Enriz, Daniel. Universidad Nacional de San Luis. Facultad de Química, Bioquímica y Farmacia. Instituto Multidisciplinario de Investigaciones Biológicas; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentin

Friendly Strategy to Prepare Encoded One Bead–One Compound Cyclic Peptide Library

One bead–one peptide libraries allow the screening of suitable ligands for any target protein. Short cyclic peptides are ideal ligands for affinity chromatography because of their high affinity and selectivity for the target protein and stability against proteases. We designed a library synthesis strategy to facilitate the identification of cyclic peptides by MS consisting of (a) sequential incorporation of a mixture of Fmoc-Ala-OH and Fmoc-Asp­[2-phenylisopropyl (OPp)]-OH (15:85) to Gly-oxymethylbenzamide-ChemMatrix (Gly-HMBA-CM) resin, (b) synthesis of the combinatorial library on the resin by the divide–couple–recombine method, (c) removal of OPp with 4% TFA, (d) peptide cyclization on solid phase through side-chain Asp and amino terminus, and (e) removal of side chain protecting groups with a 95% TFA cocktail. Peptides were cleaved from the beads with ammonia and the linear code was sequenced by MALDI-TOF MS/MS. The high capacity of ChemMatrix resin together with the sensitivity of MS allows code sequencing from a single bead