A cluster partitioning method: determination of density matrices of solids and comparison with X-ray experiments

In this paper we show that 1-electron properties such as Compton profiles and structure factors of crystals can be asymptotically retrieved through cluster-based calculations, followed by an appropriate partition of the 1-electron reduced density matrix (1RDM). This approach, conceptually simple, is checked with respects to both position and momentum spaces simultaneously for insulators and a covalent crystal. Restricting the calculations to small clusters further enables a fair description of local correlation effects in ionic compounds, which improves both Compton profiles and structure factors vs. their experimentally determined counterparts.Comment: 19 pages, 9 figures, 3 tables. Currently submitted to PR

Effect of cattle activities on gap colonization in mountain pastures

Cattle influences gap dynamics in pastures in two ways: (1) by creating gaps and (2) by affecting the colonization process. This effect of cattle activity on gap revegetation can be subdivided in three main factors: herbage removal, trampling and dung and urine deposition. The objective of this study was to assess how these three effects moderate the plant succession following gap creation. In an exclosure, four controlled treatments simulating cattle activity (repeated mowing, trampling, manuring and untreated control) were applied on plots of 2 × 2 m. In the centre of each plot, one artificial gap of 60 × 60 cm was created. During three years, vegetation changes were monitored in spring and in autumn, with a square grid of 100 cells of 0.01 m2 centred on the gap. Our experiment confirmed that fine-scale gap creation may have a high impact on relative abundances of species in the community. The gap environment acts on species as a filter and this filtering was described in terms of regenerative attributes. Colonizers were species with small seeds, unspecialized seed dispersal, persistent seed bank and high vegetation spread. However, the role of dung deposition, herbage removal or trampling by cattle did not seem to be of primary importance in the revegetation process, but could moderate vegetation response. Therefore, the different cattle effects act as secondary filters that selectively favoured or disadvantaged different species from the gap-regenerating community. These complex interactions are probably keys to understand plant coexistence in perennial grassland

Modelling the experimental electron density: only the synergy of various approaches can tackle the new challenges

This is an open-access article distributed under the terms of the Creative Commons Attribution Licence.Electron density is a fundamental quantity that enables understanding of the chemical bonding in a molecule or in a solid and the chemical/physical property of a material. Because electrons have a charge and a spin, two kinds of electron densities are available. Moreover, because electron distribution can be described in momentum or in position space, charge and spin density have two definitions and they can be observed through Bragg (for the position space) or Compton (for the momentum space) diffraction experiments, using X-rays (charge density) or polarized neutrons (spin density). In recent years, we have witnessed many advances in this field, stimulated by the increased power of experimental techniques. However, an accurate modelling is still necessary to determine the desired functions from the acquired data. The improved accuracy of measurements and the possibility to combine information from different experimental techniques require even more flexibility of the models. In this short review, we analyse some of the most important topics that have emerged in the recent literature, especially the most thought-provoking at the recent IUCr general meeting in Montreal.PM thanks the Swiss National Science foundation (Project 160157) for financial support. CL and NC are grateful to Universite de Lorraine, Agence Nationale de la recherche and CNRS, for instrumental and financial support. JMG thanks CentraleSupélec, ANR and CNRS for financial support.Peer Reviewe

Spatial and Seasonal Patterns of Cattle Habitat use in a Mountain Wooded Pasture

Management-oriented models of cattle habitat use often treat grazing pressure as a single variable summarizing all cattle activities. This paper addresses the following questions: How does the spatial pattern of cattle effects vary between cattle activities in a highly heterogeneous landscape? Do these patterns change over the grazing season as forage availability decreases? What are the respective roles of natural and management-introduced structures? We estimated the intensity of herbage removal, dung deposition and trampling after each of three grazing periods on a grid of 25m×25m cells covering an entire paddock in the Swiss Jura Mountains. We found no significant positive correlations between cattle effects. Spatial patterns weakened through the season for grazing and trampling, whereas dunging patterns changed little between grazing periods. Redundancy analysis showed that different cattle effects were correlated with different environmental variables and that the importance of management-introduced variables was highest for herbage removal. Autocorrelograms and partial redundancy analyses using principal coordinates of neighbour matrices suggested that dunging patterns were more coarse-grained than the others. Systematic differences in the spatial and seasonal patterns of cattle effects may result in complex interactions with vegetation involving feedback effects through nutrient shift, with strong implications for ecosystem management. In heterogeneous environments, such as pasture-woodland landscapes, spatially explicit models of vegetation dynamics need to model cattle effects separatel

Spatial and Seasonal Patterns of Cattle Habitat use in a Mountain Wooded Pasture

Management-oriented models of cattle habitat use often treat grazing pressure as a single variable summarizing all cattle activities. This paper addresses the following questions: How does the spatial pattern of cattle effects vary between cattle activities in a highly heterogeneous landscape? Do these patterns change over the grazing season as forage availability decreases? What are the respective roles of natural and management-introduced structures? We estimated the intensity of herbage removal, dung deposition and trampling after each of three grazing periods on a grid of 25 m × 25 m cells covering an entire paddock in the Swiss Jura Mountains. We found no significant positive correlations between cattle effects. Spatial patterns weakened through the season for grazing and trampling, whereas dunging patterns changed little between grazing periods. Redundancy analysis showed that different cattle effects were correlated with different environmental variables and that the importance of management-introduced variables was highest for herbage removal. Autocorrelograms and partial redundancy analyses using principal coordinates of neighbour matrices suggested that dunging patterns were more coarse-grained than the others. Systematic differences in the spatial and seasonal patterns of cattle effects may result in complex interactions with vegetation involving feedback effects through nutrient shift, with strong implications for ecosystem management. In heterogeneous environments, such as pasture-woodland landscapes, spatially explicit models of vegetation dynamics need to model cattle effects separately

Indications and results of liver transplantation for Echinococcus alveolar infection: an overview

Background: Alveolar echinococcosis (AE) of the liver, caused by the larval stage of the fox tapeworm Echinococcus multilocularis, has the characteristics of a slow-growing liver cancer. It is one of the rare parasitic diseases for which a parasitolytic drug is not yet available, and AE is lethal in the absence of appropriate therapeutic management. Complete surgical resection of the parasite at an early stage of infection provides favourable prospects for cure, but, due to a long clinical latency, many cases are diagnosed at an advanced stage, so that partial liver resection can be performed in only 35% of patients. Benzimidazole (BZM) treatment is given in inoperable cases but these compounds are only parasitostatic, and lifelong therapy is required. During the past 20 years some centres have considered liver transplantation (LT) for the treatment of incurable AE. Methods: Our review summarizes the results of this experience based on a series of 47 European patients who received transplants between 1985 and 2002, tries to specify the real place of LT for AE, and underlines the measures that could be undertaken in the future to improve the results. Results: Five-year survival was 71%. Five-year survival without recurrence was 58%. Major technical difficulties related either to previous laparotomies or to the loco-regional involvement were observed. The nine early deaths concerned AE patients with a long past-history of symptomatic AE (iterative cholangitis, secondary biliary cirrhosis). Five late deaths were directly related to ongoing AE, located in the brain in three cases, a very rare AE location that was not investigated before LT in these patients. Conclusions: In general, the pre-LT screening for distant AE metastases appeared insufficient in this series. Heavy immunosuppressive schemes, absence or delayed re-introduction of BZM after LT have clearly played a role in this unfavourable course. This unique experience indicates that, despite major technical difficulties, LT for incurable AE is feasible and could be discussed in very symptomatic cases. Before LT, interventional radiology should be preferred to repeated laparotomies. Pre-LT and post-LT BZM treatment is mandatory. A careful evaluation of possible distant metastases should be done before the decision for LT is made. After LT, the possibility of an ongoing AE must be permanently kept in mind. This could be reduced by lightening the immunosuppressants, carefully following the specific circulating antibodies, and applying a systematic radiological evaluation, not only to the graft but also to the lungs and the brai

Angular versus radial correlation effects on momentum distributions of light two-electron ions

We investigate different correlation mechanisms for two-electron systems and compare their respective effects on various electron distributions. The simplicity of the wave functions used allows for the derivation of closed-form analytical expressions for all electron distributions. Among other features, it is shown that angular and radial correlation mechanisms have opposite effects on Compton profiles at small momenta.Comment: 22 pages, 5 figures, 3 tabl

Competition and site weakly explain tree growth variability in undisturbed Central African moist forests

peer reviewedIdentifying and quantifying factors that influence tree growth are crucial issues to ensure sustainable forest management, particularly in moist tropical forests. Tree growth depends on several factors comprising ontogenic stage, competition by neighbours and environmental conditions. Several studies have focused on one or two of them, but very few have considered all three, especially in Central Africa. We investigated the effects of diameter and competition on tree growth, in four Central African sites characterized by their soil physicochemical properties, at both tree community and population levels. We calibrated growth models using diameter data collected on 29,741 trees between 2015 and 2018, on twelve 4 or 9-ha plots spread over the four sites. These models included diameter, wood density, competition indices and site effect as explainable variables at the community level and excluded wood density at the population level. At the community level, the best models explained 11% of growth variability with a decreasing effect of species wood density, diameter, site and competition. Our results show that even if low, site effect can result from different soil nutrients depending on both tree size and species wood density. We observed higher tree growth on sites with (i) high exchangeable K, organic C, total N and total P for low wood density species; (ii) high available P and C:N for small trees, high exchangeable Ca and Mg for medium to large trees, all belonging to medium and hard wood density species. At the population level, the best models explained between 0 to 43% of growth variability, with significant competition effect (resp. site effect) for 21 (resp. 9) of the 43 species studied. Site ranking varied greatly between the 9 species concerned, probably reflecting different sensitivities to the scarcity of particular soil nutrients. Synthesis. Our study provides original results on the factors influencing tree growth in Central Africa, showing that the potential effect of soil nutrients depends on tree size and species wood density. Remaining highly unpredictable at the population level, this effect makes it essential to increase the number of dynamics monitoring systems in logging concessions

Ecological conditions for Saxifraga hirculus in Central Europe: a better understanding for a good protection

Saxifraga hirculus is a postglacial relict in Central Europe, whose populations suffered a dramatic decrease in the 19th and 20th centuries. However, few researchers have been interested in its ecological requirements in Central Europe. This article synthesizes previous knowledge supplemented by original data from the last large population (Switzerland). S. hirculus is a weak competitor which needs precise ecological conditions. It grows on bryophyte carpets in neutral to slightly acid wetlands, with stable water table close to the soil surface (optimum between 8-14 cm) but does not stand long flooding. However, it requires a good oxygen supply, with roots 2-3 cm under the soil surface, generally not reached by water, with running, cold water through loose, fibric peat. Its optimal conditions are in spring fens, but it grows in other types of wetlands as well. However, overgrowing by shrubs, sedges or Sphagnum in natural successions may threaten the species with extinction, as did drainage and peat extraction previously. Now, its survival in Central Europe depends on an adequate management of the ecosystems. Moderate grazing (cattle or sheep) or mowing help to limit competition with taller Carex species. Re-introduction of disappeared populations or creation of new ones from cultivation in botanical garden is possible, but appropriate sites are rare. In some cases, substrate management could improve the conditions in somewhat inadequate situations. This management in four directions can be flexibly applied in different situations to progress to optimal conditions for the conservation of this valuable species