Crustal structure and deformation beneath the NE margin of the Tibetan plateau constrained by teleseismic receiver function data

We analysed a large amount of teleseismic receiver function data recorded by 172 broadband stations in the NE Tibetan plateau and its surrounding areas to investigate the crustal velocity and anisotropy structure beneath the margin. We first applied the modified H–κ stacking technique to measure the crustal thickness and average Vp/Vs ratio, and then employed a joint inversion scheme to measure azimuthal anisotropy of the crust beneath each station. The observed crustal thickness and Vp/Vs ratio exhibit large variations across the study area, varying from 32 to 75.6 km and from 1.601 to 1.864, respectively. We also found significant azimuthal anisotropy within the crust beneath 12 stations, with a splitting time between 0.36 and 1.06s. The fast polarization directions align well with surface structures, and follow the directions of the maximum horizontal tensile stress. The low Vp/Vs ratio and the strong azimuthal anisotropy observed beneath the margin suggest that whole crustal shortening might be the dominant mechanism for producing the thick crust in NE Tibet. We compared the measured seismic anisotropy with those measured from XKS (SKS, PKS and SKKS), and found that crustal anisotropy appears to play an important role in explaining the amount of XKS splitting times. More importantly, the Moho Ps and the XKS share similar fast polarization directions, suggesting a vertically coherent deformation within the lithosphere beneath the margin

Geometric phases for wave packets in a uniform magnetic field

A wave packet of a charged particle always make cyclic circular motion in a uniform magnetic field, just like a classical particle. The nonadiabatic geometric phase for an arbitrary wave packet can be expressed in terms of the mean value of a number operator. For a large class of wave packets, the geometric phase is proportional to the magnetic flux encircled by the orbit of the wave packet. For more general wave packets, however, the geometric phase contains an extra term.Comment: REVTeX4, 7 pages, no figur

Slow light by coherent hole burnings

We show that the simultaneous application of a copropagating saturating pump and a counterpropagating coherent beam can be used to burn a narrow spectral hole within the absorption line of the optical transition in a Doppler-broadened medium. The large index of refraction of this hole slows down a light pulse by a factor of about 104. In addition, we propose a method to create two-color slow light pulses with simultaneous gain by employing a bichromatic field to saturate the medium

A new stripe rust resistance gene transferred from Thinopyrum intermedium to hexaploid wheat (Triticum aestivum)

Wheat stripe rust (Puccinia striiforis f. sp. tritici) races CYR31 and CYR32, prevalent in China, are virulent to many wheat stripe rust resistance genes (Yr genes). To expand the availability of effective resistance to CYR31 and CYR32, stripe rust resistance was transferred from intermediate wheatgrass (Thinopyrum intermedium) to common wheat (Triticum aestivum). The susceptible wheat cultivar CM107 was crossed with amphiploid TAI7047, derived from the wide cross Taiyuan768/Thinopyrum intermedium//76(64). Two wheat lines originating from the cross, YU24 and YU25, were resistant to CYR31 and CYR32. Pedigree analysis showed that the resistance to stripe rust in YU24 and YU25 originated from intermediate wheatgrass. Genetic analyses indicated that the resistance to stripe rust is controlled by a single dominant gene. Allelic tests determined that the resistance gene(s) in YU24 and YU25 are identical. The new gene has temporarily been designated as YrYU25. SSR and RAPD analyses showed that YrYU25 was introduced by cryptic translocation into common wheat.Les races CYR31 et CYR32 de la rouille jaune du blé (Puccinia striiforis f. sp. tritici), très répandues en Chine, sont virulentes pour plusieurs gènes de résistance à cette maladie (gènes Yr). Afin d'accroître la disponibilité d'une résistance efficace aux races CYR31 et CYR32, la résistance à la rouille jaune du blé a été transférée de l'agropyre intermédiaire (Thinopyrum intermedium) au blé tendre (Triticum aestivum). CM107, un cultivar de blé sensible, a été croisé avec l'amphiploïde AI7047 dérivé du croisement éloigné Taiyuan768/Thinopyrum intermedium//76(64). Deux lignées de blé provenant de ce croisement, soit YU24 et YU25, étaient résistantes aux races CYR31 et CYR32. Une analyse généalogique a démontré que la résistance à la rouille jaune du blé chez les lignées YU24 et YU25 provenait de l'agropyre intermédiaire. Des analyses génétiques ont indiqué que cette résistance était contrôlée par un seul gène dominant. Des tests d'allélisme ont révélé que le(s) gène(s) de résistance dans les lignées YU24 et YU25 étaient identiques. Le nouveau gène a temporairement été nommé YrYU25. Des analyses SSR et RAPD ont démontré que le gène YrYU25 avait été introduit dans le blé tendre par translocation cryptique

Selection and environmental adaptation along a path to speciation in the Tibetan frog Nanorana parkeri.

Tibetan frogs, Nanorana parkeri, are differentiated genetically but not morphologically along geographical and elevational gradients in a challenging environment, presenting a unique opportunity to investigate processes leading to speciation. Analyses of whole genomes of 63 frogs reveal population structuring and historical demography, characterized by highly restricted gene flow in a narrow geographic zone lying between matrilines West (W) and East (E). A population found only along a single tributary of the Yalu Zangbu River has the mitogenome only of E, whereas nuclear genes of W comprise 89-95% of the nuclear genome. Selection accounts for 579 broadly scattered, highly divergent regions (HDRs) of the genome, which involve 365 genes. These genes fall into 51 gene ontology (GO) functional classes, 14 of which are likely to be important in driving reproductive isolation. GO enrichment analyses of E reveal many overrepresented functional categories associated with adaptation to high elevations, including blood circulation, response to hypoxia, and UV radiation. Four genes, including DNAJC8 in the brain, TNNC1 and ADORA1 in the heart, and LAMB3 in the lung, differ in levels of expression between low- and high-elevation populations. High-altitude adaptation plays an important role in maintaining and driving continuing divergence and reproductive isolation. Use of total genomes enabled recognition of selection and adaptation in and between populations, as well as documentation of evolution along a stepped cline toward speciation

Near-field photocurrent nanoscopy on bare and encapsulated graphene

Opto-electronic devices utilizing graphene have already demonstrated unique capabilities, which are much more difficult to realize with conventional technologies. However, the requirements in terms of material quality and uniformity are very demanding. A major roadblock towards high-performance devices are the nanoscale variations of graphene properties, which strongly impact the macroscopic device behaviour. Here, we present and apply opto-electronic nanoscopy to measure locally both the optical and electronic properties of graphene devices. This is achieved by combining scanning near-field infrared nanoscopy with electrical device read-out, allowing infrared photocurrent mapping at length scales of tens of nanometers. We apply this technique to study the impact of edges and grain boundaries on spatial carrier density profiles and local thermoelectric properties. Moreover, we show that the technique can also be applied to encapsulated graphene/hexagonal boron nitride (h-BN) devices, where we observe strong charge build-up near the edges, and also address a device solution to this problem. The technique enables nanoscale characterization for a broad range of common graphene devices without the need of special device architectures or invasive graphene treatment

Relationship of PIK3CA mutation and pathway activity with antiproliferative response to aromatase inhibition

INTRODUCTION: PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit α) somatic mutations are the most common genetic alteration in breast cancer (BC). Their prognostic value and that of the phosphatidylinositol 3-kinase (PI3K) pathway in BC remains only partly defined. The effect of PIK3CA mutations and alterations of the PI3K pathway on the antiproliferative response to aromatase inhibitor treatment was determined. METHODS: The Sequenom MassARRAY System was used to determine the presence of 20 somatic mutations across the PIK3CA gene in 85 oestrogen receptor–positive (ER+) BC patients treated with 2 weeks of anastrozole before surgery. Whole-genome expression profiles were used to interrogate gene signatures (GSs) associated with the PI3K pathway. Antiproliferative activity was assessed by the change in Ki67 staining between baseline and surgery. Three GSs representing the PI3K pathway were assessed (PIK3CA-GS (Loi), PI3K-GS (Creighton) and PTEN-loss-GS (Saal)). RESULTS: In our study sample, 29% of tumours presented with either a hotspot (HS, 71%) or a nonhotspot (non-HS, 29%) PIK3CA mutation. Mutations were associated with markers of good prognosis such as progesterone receptor positivity (PgR+) (P = 0.006), low grade (P = 0.028) and luminal A subtype (P = 0.039), with a trend towards significance with degree of ER positivity (P = 0.051) and low levels of Ki67 (P = 0.051). Non-HS mutations were associated with higher PgR (P = 0.014) and ER (P < 0.001) expression than both wild-type (WT) and HS-mutated samples, whereas neither biomarker differed significantly between WT and HS mutations or between HS and non-HS mutations. An inverse correlation was found between the Loi signature and both the Creighton and Saal signatures, and a positive correlation was found between the latter signatures. Lower pretreatment Ki67 levels were observed in mutation compared with WT samples (P = 0.051), which was confirmed in an independent data set. Mutation status did not predict change in Ki67 in response to 2 weeks of anastrozole treatment; there was no significant difference between HS and non-HS mutations in this regard. CONCLUSIONS: PIK3CA mutations are associated with classical markers of good prognosis and signatures of PI3K pathway activity. The presence of a PIK3CA mutation does not preclude a response to neoadjuvant anastrozole treatment