31 research outputs found

    Measurement and Computation of Movement of Bromide Ions and Carbofuran in Ridged Humic-Sandy Soil

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    Water flow and pesticide transport in the soil of fields with ridges and furrows may be more complex than in the soil of more level fields. Prior to crop emergence, the tracer bromide ion and the insecticide carbofuran were sprayed on the humic-sandy soil of a potato field with ridges and furrows. Rainfall was supplemented by sprinkler irrigation. The distribution of the substances in the soil profile of the ridges and furrows was measured on three dates in the potato growing season. Separate ridge and furrow systems were simulated by using the pesticide emission assessment at regional and local scales (PEARL) model for pesticide behavior in soil–plant systems. The substances travelled deeper in the furrow soil than in the ridge soil, because of runoff from the ridges to the furrows. At 19 days after application, the peak of the bromide distribution was measured to be in the 0.1–0.2 m layer of the ridges, while it was in the 0.3–0.5 m layer of the furrows. After 65 days, the peak of the carbofuran distribution in the ridge soil was still in the 0.1 m top layer, while the pesticide was rather evenly distributed in the top 0.6 m of the furrow soil. The wide ranges in concentration measured with depth showed that preferential water flow and substance transport occurred in the sandy soil. Part of the bromide ion distribution was measured to move faster in soil than the computed wave. The runoff of water and pesticide from the ridges to the furrows, and the thinner root zone in the furrows, are expected to increase the risk of leaching to groundwater in ridged fields, in comparison with more level fields

    Chiasmata Promote Monopolar Attachment of Sister Chromatids and Their Co-Segregation toward the Proper Pole during Meiosis I

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    The chiasma is a structure that forms between a pair of homologous chromosomes by crossover recombination and physically links the homologous chromosomes during meiosis. Chiasmata are essential for the attachment of the homologous chromosomes to opposite spindle poles (bipolar attachment) and their subsequent segregation to the opposite poles during meiosis I. However, the overall function of chiasmata during meiosis is not fully understood. Here, we show that chiasmata also play a crucial role in the attachment of sister chromatids to the same spindle pole and in their co-segregation during meiosis I in fission yeast. Analysis of cells lacking chiasmata and the cohesin protector Sgo1 showed that loss of chiasmata causes frequent bipolar attachment of sister chromatids during anaphase. Furthermore, high time-resolution analysis of centromere dynamics in various types of chiasmate and achiasmate cells, including those lacking the DNA replication checkpoint factor Mrc1 or the meiotic centromere protein Moa1, showed the following three outcomes: (i) during the pre-anaphase stage, the bipolar attachment of sister chromatids occurs irrespective of chiasma formation; (ii) the chiasma contributes to the elimination of the pre-anaphase bipolar attachment; and (iii) when the bipolar attachment remains during anaphase, the chiasmata generate a bias toward the proper pole during poleward chromosome pulling that results in appropriate chromosome segregation. Based on these results, we propose that chiasmata play a pivotal role in the selection of proper attachments and provide a backup mechanism that promotes correct chromosome segregation when improper attachments remain during anaphase I

    Intraperitoneal drain placement and outcomes after elective colorectal surgery: international matched, prospective, cohort study

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    Despite current guidelines, intraperitoneal drain placement after elective colorectal surgery remains widespread. Drains were not associated with earlier detection of intraperitoneal collections, but were associated with prolonged hospital stay and increased risk of surgical-site infections.Background Many surgeons routinely place intraperitoneal drains after elective colorectal surgery. However, enhanced recovery after surgery guidelines recommend against their routine use owing to a lack of clear clinical benefit. This study aimed to describe international variation in intraperitoneal drain placement and the safety of this practice. Methods COMPASS (COMPlicAted intra-abdominal collectionS after colorectal Surgery) was a prospective, international, cohort study which enrolled consecutive adults undergoing elective colorectal surgery (February to March 2020). The primary outcome was the rate of intraperitoneal drain placement. Secondary outcomes included: rate and time to diagnosis of postoperative intraperitoneal collections; rate of surgical site infections (SSIs); time to discharge; and 30-day major postoperative complications (Clavien-Dindo grade at least III). After propensity score matching, multivariable logistic regression and Cox proportional hazards regression were used to estimate the independent association of the secondary outcomes with drain placement. Results Overall, 1805 patients from 22 countries were included (798 women, 44.2 per cent; median age 67.0 years). The drain insertion rate was 51.9 per cent (937 patients). After matching, drains were not associated with reduced rates (odds ratio (OR) 1.33, 95 per cent c.i. 0.79 to 2.23; P = 0.287) or earlier detection (hazard ratio (HR) 0.87, 0.33 to 2.31; P = 0.780) of collections. Although not associated with worse major postoperative complications (OR 1.09, 0.68 to 1.75; P = 0.709), drains were associated with delayed hospital discharge (HR 0.58, 0.52 to 0.66; P < 0.001) and an increased risk of SSIs (OR 2.47, 1.50 to 4.05; P < 0.001). Conclusion Intraperitoneal drain placement after elective colorectal surgery is not associated with earlier detection of postoperative collections, but prolongs hospital stay and increases SSI risk

    Overexpression of a serine alkaline protease gene in Bacillus licheniformis and its impact on the metabolic reaction network

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    This work reports on cloning of serine alkaline protease (SAP) encoding gene subC to a multi-copy plasmid and its expression in Bacillus licheniformis with the quantitative impact of overexpression of the subC gene on metabolic flux distributions. Bioprocess characteristics of the wild-type and the recombinant B. licheniformis were investigated in a defined simple synthetic medium with glucose as the sole carbon source under well-defined bioreactor-operation conditions. Significant physiological changes were observed in the recombinant B. licheniformis in response to altered bioreactor-operation conditions, i.e. initial glucose concentration, The growth kinetics of microbial cells were investigated prior to the investigation of intracellular reactions and rates within the cell; the unstructured substrate inhibition and Monod models were found valid for the wild-type and recombinant B. licheniformis, respectively. Optimum initial glucose concentration for maximum SAP production and the corresponding cultivation time of the recombinant B. licheniformis shifted respectively from C-G0 = 6 to 8 kg m(-3) and from t = 43 to 67 h. The maximum SAP activity was obtained as 950 U cm(-3) with the recombinant B. licheniformis, which was ca. 2.5-fold higher than that of the wild-type. Carbon fluxes through the central metabolic pathways in the wild-type and recombinant B. licheniformis were calculated, using a mass balance-based mathematical model that contains 105 metabolites and 148 reaction fluxes and the time profiles of glucose. dry cell weight, organic acids, amino acids and SAP obtained in 3.5 dm(3) bioreactor systems at C-G0 = 6 kg m(-3) for the exponential growth phase and the SAP production phase. The bioreaction network flux analyses were first accomplished by using the theoretical data-based approach, and then by using the theoretical data-based capacity analysis approach. During the SAP synthesis period, the actual fluxes of the glycolysis pathway. the pentose phosphate pathway, the tricarboxylic acid cycle, the amino acids biosynthetic pathways (and, consequently, SAP synthesis) are higher in the recombinant B. licheniformis strain than in the wild-type. Further, the normalised relative flux values of all the pathways, except the glycolysis pathway, change considerably in the recombinant bacteria. The effectiveness factor, defined as the SAP synthesis rate per maximum possible SAP synthesis rate was eta = 0.20 for the recombinant B. licheniformis. This indicates the possibility of a further increase in SAP production through metabolic engineering, and potential strategies to achieve this are. also discussed. (C) 2003 Elsevier Science Inc. All rights reserved

    Transformation of Saccharomyces cerevisiae and other fungi: Methods and possible underlying mechanism

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    Transformation (i.e., genetic modification of a cell by the incorporation of exogenous DNA) is indispensable for manipulating fungi. Here, we review the transformation methods for Saccharomyces cerevisiae, Schizosaccharomyces pombe, Candida albicans, Pichia pastoris and Aspergillus species and discuss some common modifications to improve transformation efficiency. We also present a model of the mechanism underlying S. cerevisiae transformation, based on recent reports and the mechanism of transfection in mammalian systems. This model predicts that DNA attaches to the cell wall and enters the cell via endocytotic membrane invagination, although how DNA reaches the nucleus is unknown. Polyethylene glycol is indispensable for successful transformation of intact cells and the attachment of DNA and also possibly acts on the membrane to increase the transformation efficiency. Both lithium acetate and heat shock, which enhance the transformation efficiency of intact cells but not that of spheroplasts, probably help DNA to pass through the cell wall

    Determinants of repeated-sprint ability in females matched for single-sprint performance

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    This study investigated the relationship between VO2max and repeated-sprint ability (RSA), while controlling for the effects of initial sprint performance on sprint decrement. This was achieved via two methods: (1) matching females of low and moderate aerobic fitness (VO2max: 36.4 ± 4.7 vs 49.6 ± 5.5 ml kg−1 min−1 ; p 0.05) to r = −0.50 (p < 0.05). These results indicate that VO2max does contribute to performance during repeated-sprint efforts. However, the small variance in W dec explained by VO2max suggests that other factors also play a role

    Safety Guarantees for Hybrid Systems

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    Hybrid systems describe processes that typically need to satisfy a set of strict physical, computation, and communication constraints. Mission-critical and time-critical cyber-physical systems are a prime example where these constraints play a key role in analysis, controller synthesis, and implementation. On top of classical notions such as stability, safety plays a major role in the control design of hybrid systems. There is a long history of methods related to the safety analysis and safety enforcement for dynamical systems, with the ones concerning linear systems being more mature than the others. Due to the importance and complexity of the underlying problem, several different techniques have been developed for hybrid systems. This entry summarizes the most important approaches and tools, together with references for further reading

    Reliability of a 5 × 6-s maximal cycling repeated-sprint test in trained female team-sport athletes

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    The present study examined the reliability of work and power measures during a 5 · 6-s cycle ergometer test of repeated-sprint ability. Nine, welltrained, female soccer players performed five, 5 · 6-s repeated-sprint tests on a front-access cycle ergometer on separate days. Sprints were separated by 24 s of active recovery. Absolute measures of total work done (Wtot), total peak power (PPtot), work done during sprint 1 (W1) and peak power output during sprint 1 (PP1) were recorded. Decrement scores in work done (Wdec) and peak power output (PPdec), and fatigue indices for work done (FIW) and peak power (FIP), were calculated. Significant improvements in all of the work and power measures were observed between trial 1 and subsequent trials (P < 0.05), but no significant differences were identified between trials 2, 3, 4 and 5. The same was true for increases in the decrement scores. The coefficient of variation (CV) was established to reflect within-subject reproducibility for each variable. The CV was significantly improved by the third trial for work done (Wtot CV: trials 1–2 = 5.5%; trials 3–4 = 2.8%), peak power (PPtot CV: trials 1– 2 = 5.1%; trials 3–4 = 2.7%) and performance decrement scores (P < 0.05). The standard error of measurement (SEM) and intraclass correlation coefficient (ICC) were also calculated for each variable and expressed within 95% confidence intervals. It was concluded that two familiarisation trials are optimal for collecting reliable data from a 5 · 6-s repeated-sprint cycling test. Furthermore, due to the large variation around performance decrement it was suggested that decrement scores ought to be interpreted with caution
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