1,560 research outputs found
A Revision of the Comatulid Genus Stephanometra AH Clark With a Rediagnosis of the Genus Lamprometra AH Clark (Echinodermata: Crinoidea)
Several genera in the comatulid crinoid family Mariametridae are currently ambiguously distinguished on the basis of variations in length and robustness of oral pinnules. Previous descriptions have suggested that at least the genera Stephanometra and Lamprometra, both common and widespread on Indo-western Pacific reefs, are imperfectly distinguishable. A detailed morphological re-examination supports distinct Stephanometra and Lamprometra. The five currently recognized species of Stephanometra are reduced to two: S. echinus under S. tenuipinna, and S. spicata (inlcuding S. oxyacantha) and S. spinipinna under S. indica. Of specimens examined in the indica-spicata-oxyacantha series, 20% are intermediates that cannot be satisfactorily assigned to species based on current diagnoses. In Lamprometra, L. klunzingeri and L. palmata gyges are formally reduced to infrasubspecific variants of L. palmata
Zoogeography of Tropical Western Atlantic Crinoidea (Echinodermata)
Recent collections of crinoids from the intertidal zone to 1,650 m in the tropical western Atlantic have provided significant range extensions for more than half of the 44 comatulid and stalked species known from the region. Of the 34 comatulid species, over 60% are endemic to the region; of the 10 stalked species, 90% are endemic. At the familial level, this fauna has its strongest affinities with the tropical Indo-Pacific region. Comatulids are most abundant above 300 m, while stalked species occur primarily between 100 and 700 m. Species that occur primarily above 600 m (the deepest penetration of the 10°C isotherm in the region) have depth ranges generally narrower than 200 m. Species that are found below 1,000 m generally have much broader depth ranges
Using a Combined Approach to Explain the Morphological and Ecological Diversity in Phanogenia gracilis Harlaub, 1893 (Echinodermata: Crinoidea) sensu lato: Two Species or Intraspecific Variation?
Phanogenia gracilis sensu lato is a shallow-water crinoid distributed throughout the Indo-western Pacific. The taxonomy of P. gracilis s.l. is clouded by the presence of two distinct morphotypes, each differing in morphology and ecology. The goal was to determine the taxonomic status of P. gracilis s.l. using partial gene sequences of two mitochondrial DNA genes, cytochrome oxidase c subunit I and NADH dehydrogenase subunit II, in conjunction with morphological and ecological data. The molecular phylogenies revealed three lineages separated by 5.0–6.6% corrected genetic distance, which is consistent with the genetic distances among other echinoderm species. Neither morphotype was monophyletic, nor was any examined morphological character exclusive to any one lineage. Discriminant function analysis (DFA) of the morphological and ecological data yielded significant results when grouping P. gracilis by morphotype and by clades recovered in the phylogenetic analyses, but grouping by sample locality was rejected. Although DFA results of grouping by clade were significant, jackknife support was weak, while only correctly grouping specimens by their respective clades 65% of the time. The results suggest the possibility of cryptic species, but additional molecular and morphological data are needed to confirm this. This study demonstrates the need to reevaluate the taxonomy of crinoid species and their respective diagnostic characters
Rotation Measure Synthesis of Galactic Polarized Emission with the DRAO 26-m Telescope
Radio polarimetry at decimetre wavelengths is the principal source of
information on the Galactic magnetic field. The diffuse polarized emission is
strongly influenced by Faraday rotation in the magneto-ionic medium and
rotation measure is the prime quantity of interest, implying that all Stokes
parameters must be measured over wide frequency bands with many frequency
channels. The DRAO 26-m Telescope has been equipped with a wideband feed, a
polarization transducer to deliver both hands of circular polarization, and a
receiver, all operating from 1277 to 1762 MHz. Half-power beamwidth is between
40 and 30 arcminutes. A digital FPGA spectrometer, based on commercially
available components, produces all Stokes parameters in 2048 frequency channels
over a 485-MHz bandwidth. Signals are digitized to 8 bits and a Fast Fourier
Transform is applied to each data stream. Stokes parameters are then generated
in each frequency channel. This instrument is in use at DRAO for a Northern sky
polarization survey. Observations consist of scans up and down the Meridian at
a drive rate of 0.9 degree per minute to give complete coverage of the sky
between declinations -30 degree and 90 degree. This paper presents a complete
description of the receiver and data acquisition system. Only a small fraction
of the frequency band of operation is allocated for radio astronomy, and about
20 percent of the data are lost to interference. The first 8 percent of data
from the survey are used for a proof-of-concept study, which has led to the
first application of Rotation Measure Synthesis to the diffuse Galactic
emission obtained with a single-antenna telescope. We find rotation measure
values for the diffuse emission as high as approximately 100 rad per square
metre, much higher than recorded in earlier work.Comment: Accepted for publication in The Astronomical Journa
CN and HCN in Dense Interstellar Clouds
We present a theoretical investigation of CN and HCN molecule formation in
dense interstellar clouds. We study the gas-phase CN and HCN production
efficiencies from the outer photon-dominated regions (PDRs) into the opaque
cosmic-ray dominated cores. We calculate the equilibrium densities of CN and
HCN, and of the associated species C+, C, and CO, as functions of the
far-ultraviolet (FUV) optical depth. We consider isothermal gas at 50 K, with
hydrogen particle densities from 10^2 to 10^6 cm^-3. We study clouds that are
exposed to FUV fields with intensities 20 to 2*10^5 times the mean interstellar
FUV intensity. We assume cosmic-ray H2 ionization rates ranging from 5*10^-17
s^-1, to an enhanced value of 5*10^-16 s^-1. We also examine the sensitivity of
the density profiles to the gas-phase sulfur abundance.Comment: Accepted for publication in ApJ, 33 pages, 8 figure
Differential Gene Expression and Epiregulation of Alpha Zein Gene Copies in Maize Haplotypes
Multigenic traits are very common in plants and cause diversity. Nutritional quality is such a trait, and one of its factors is the composition and relative expression of storage protein genes. In maize, they represent a medium-size gene family distributed over several chromosomes and unlinked locations. Two inbreds, B73 and BSSS53, both from the Iowa Stiff Stock Synthetic collection, have been selected to analyze allelic and non-allelic variability in these regions that span between 80–500 kb of chromosomal DNA. Genes were copied to unlinked sites before and after allotetraploidization of maize, but before transposition enlarged intergenic regions in a haplotype-specific manner. Once genes are copied, expression of donor genes is reduced relative to new copies. Epigenetic regulation seems to contribute to silencing older copies, because some of them can be reactivated when endosperm is maintained as cultured cells, indicating that copy number variation might contribute to a reserve of gene copies. Bisulfite sequencing of the promoter region also shows different methylation patterns among gene clusters as well as differences between tissues, suggesting a possible position effect on regulatory mechanisms as a result of inserting copies at unlinked locations. The observations offer a potential paradigm for how different gene families evolve and the impact this has on their expression and regulation of their members
The Tate conjecture for K3 surfaces over finite fields
Artin's conjecture states that supersingular K3 surfaces over finite fields
have Picard number 22. In this paper, we prove Artin's conjecture over fields
of characteristic p>3. This implies Tate's conjecture for K3 surfaces over
finite fields of characteristic p>3. Our results also yield the Tate conjecture
for divisors on certain holomorphic symplectic varieties over finite fields,
with some restrictions on the characteristic. As a consequence, we prove the
Tate conjecture for cycles of codimension 2 on cubic fourfolds over finite
fields of characteristic p>3.Comment: 20 pages, minor changes. Theorem 4 is stated in greater generality,
but proofs don't change. Comments still welcom
On a Conjecture of Rapoport and Zink
In their book Rapoport and Zink constructed rigid analytic period spaces
for Fontaine's filtered isocrystals, and period morphisms from PEL
moduli spaces of -divisible groups to some of these period spaces. They
conjectured the existence of an \'etale bijective morphism of
rigid analytic spaces and of a universal local system of -vector spaces on
. For Hodge-Tate weights and we construct in this article an
intrinsic Berkovich open subspace of and the universal local
system on . We conjecture that the rigid-analytic space associated with
is the maximal possible , and that is connected. We give
evidence for these conjectures and we show that for those period spaces
possessing PEL period morphisms, equals the image of the period morphism.
Then our local system is the rational Tate module of the universal
-divisible group and enjoys additional functoriality properties. We show
that only in exceptional cases equals all of and when the
Shimura group is we determine all these cases.Comment: v2: 48 pages; many new results added, v3: final version that will
appear in Inventiones Mathematica
Lithium Decreases Glial Fibrillary Acidic Protein in a Mouse Model of Alexander Disease.
Alexander disease is a fatal neurodegenerative disease caused by mutations in the astrocyte intermediate filament glial fibrillary acidic protein (GFAP). The disease is characterized by elevated levels of GFAP and the formation of protein aggregates, known as Rosenthal fibers, within astrocytes. Lithium has previously been shown to decrease protein aggregates by increasing the autophagy pathway for protein degradation. In addition, lithium has also been reported to decrease activation of the transcription factor STAT3, which is a regulator of GFAP transcription and astrogliogenesis. Here we tested whether lithium treatment would decrease levels of GFAP in a mouse model of Alexander disease. Mice with the Gfap-R236H point mutation were fed lithium food pellets for 4 to 8 weeks. Four weeks of treatment with LiCl at 0.5% in food pellets decreased GFAP protein and transcripts in several brain regions, although with mild side effects and some mortality. Extending the duration of treatment to 8 weeks resulted in higher mortality, and again with a decrease in GFAP in the surviving animals. Indicators of autophagy, such as LC3, were not increased, suggesting that lithium may decrease levels of GFAP through other pathways. Lithium reduced the levels of phosphorylated STAT3, suggesting this as one pathway mediating the effects on GFAP. In conclusion, lithium has the potential to decrease GFAP levels in Alexander disease, but with a narrow therapeutic window separating efficacy and toxicity
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