Will Wallace's Line save Australia from avian influenza?

Australia is separated from the Asian faunal realm by Wallace’s Line, across which there is relatively little avian migration. Although this does diminish the risk of high pathogenicity avian influenza of Asian origin arriving with migratory birds, the barrier is not complete. Migratory shorebirds, as well as a few landbirds, move through the region on annual migrations to and from Southeast Asia and destinations further north, although the frequency of infection of avian influenza in these groups is low. Nonetheless, high pathogenicity H5N1 has recently been recorded on the island of New Guinea in West Papua in domestic poultry. This event increases interest in the movements of birds between Wallacea in eastern Indonesia, New Guinea, and Australia, particularly by waterbirds. There are frequent but irregular movements of ducks, geese, and other waterbirds across Torres Strait between New Guinea and Australia, including movements to regions in which H5N1 has occurred in the recent past. Although the likelihood of avian influenza entering Australia via an avian vector is presumed to be low, the nature and extent of bird movements in this region is poorly known. There have been five recorded outbreaks of high pathogenicity avian influenza in Australian poultry flocks, all of the H7 subtype. To date, Australia is the only inhabited continent not to have recorded high pathogenicity avian influenza since 1997, and H5N1 has never been recorded. The ability to map risk from high pathogenicity avian influenza to Australia is hampered by the lack of quantitative data on the extent of bird movements between Australia and its northern neighbors. Recently developed techniques offer the promise to fill this knowledge gap

On Vertex- and Empty-Ply Proximity Drawings

We initiate the study of the vertex-ply of straight-line drawings, as a relaxation of the recently introduced ply number. Consider the disks centered at each vertex with radius equal to half the length of the longest edge incident to the vertex. The vertex-ply of a drawing is determined by the vertex covered by the maximum number of disks. The main motivation for considering this relaxation is to relate the concept of ply to proximity drawings. In fact, if we interpret the set of disks as proximity regions, a drawing with vertex-ply number 1 can be seen as a weak proximity drawing, which we call empty-ply drawing. We show non-trivial relationships between the ply number and the vertex-ply number. Then, we focus on empty-ply drawings, proving some properties and studying what classes of graphs admit such drawings. Finally, we prove a lower bound on the ply and the vertex-ply of planar drawings.Comment: Appears in the Proceedings of the 25th International Symposium on Graph Drawing and Network Visualization (GD 2017

Concept 3

Concept III, the publication of Syracuse University School of Architecture of 1964, is devoted to the subject which occupies most of the time and hopefully much of the thought of its students: architectural education

Multi-Level Steiner Trees

In the classical Steiner tree problem, one is given an undirected, connected graph G=(V,E) with non-negative edge costs and a set of terminals T subseteq V. The objective is to find a minimum-cost edge set E\u27 subseteq E that spans the terminals. The problem is APX-hard; the best known approximation algorithm has a ratio of rho = ln(4)+epsilon < 1.39. In this paper, we study a natural generalization, the multi-level Steiner tree (MLST) problem: given a nested sequence of terminals T_1 subset ... subset T_k subseteq V, compute nested edge sets E_1 subseteq ... subseteq E_k subseteq E that span the corresponding terminal sets with minimum total cost. The MLST problem and variants thereof have been studied under names such as Quality-of-Service Multicast tree, Grade-of-Service Steiner tree, and Multi-Tier tree. Several approximation results are known. We first present two natural heuristics with approximation factor O(k). Based on these, we introduce a composite algorithm that requires 2^k Steiner tree computations. We determine its approximation ratio by solving a linear program. We then present a method that guarantees the same approximation ratio and needs at most 2k Steiner tree computations. We compare five algorithms experimentally on several classes of graphs using four types of graph generators. We also implemented an integer linear program for MLST to provide ground truth. Our combined algorithm outperforms the others both in theory and in practice when the number of levels is small (k <= 22), which works well for applications such as designing multi-level infrastructure or network visualization

Microscale to Manufacturing Scale-up of Cell-Free Cytokine Production—A New Approach for Shortening Protein Production Development Timelines

Engineering robust protein production and purification of correctly folded biotherapeutic proteins in cell-based systems is often challenging due to the requirements for maintaining complex cellular networks for cell viability and the need to develop associated downstream processes that reproducibly yield biopharmaceutical products with high product quality. Here, we present an alternative Escherichia coli-based open cell-free synthesis (OCFS) system that is optimized for predictable high-yield protein synthesis and folding at any scale with straightforward downstream purification processes. We describe how the linear scalability of OCFS allows rapid process optimization of parameters affecting extract activation, gene sequence optimization, and redox folding conditions for disulfide bond formation at microliter scales. Efficient and predictable high-level protein production can then be achieved using batch processes in standard bioreactors. We show how a fully bioactive protein produced by OCFS from optimized frozen extract can be purified directly using a streamlined purification process that yields a biologically active cytokine, human granulocyte-macrophage colony-stimulating factor, produced at titers of 700 mg/L in 10 h. These results represent a milestone for in vitro protein synthesis, with potential for the cGMP production of disulfide-bonded biotherapeutic proteins. Biotechnol. Bioeng. 2011; 108:1570–1578. © 2011 Wiley Periodicals, Inc

Disordered Environments in Spatial Games

The Prisoner's dilemma is the main game theoretical framework in which the onset and maintainance of cooperation in biological populations is studied. In the spatial version of the model, we study the robustness of cooperation in heterogeneous ecosystems in spatial evolutionary games by considering site diluted lattices. The main result is that due to disorder, the fraction of cooperators in the population is enhanced. Moreover, the system presents a dynamical transition at $\rho^*$, separating a region with spatial chaos from one with localized, stable groups of cooperators.Comment: 6 pages, 5 figure

The Real (Social) Experience of Monetary Policy

This paper takes a socio-economic approach to considering money in relation to real experience, focusing on the real effects of monetary policy. While most of the economics literature focuses on interest-rate setting as the core tool of monetary policy, we focus here instead on signalling by the central bank as a mechanism for influencing expectations and behaviour in conditions of uncertainty. This involves addressing the social-conventional expectations among different groups (a mechanism for dealing with uncertainty) applied to their particular ways of framing the real and financial sectors. Actual credit conditions faced by borrowers in turn are the outcome of the conventional view among banks as a result of their framing and the influence of central bank signalling. These relations between central banks, banks and the non-bank public in turn normally rest on long-established relations of trust. We consider the real effects of monetary policy in circumstances where trust has broken down

Same Trait, Different Receiver Response: Unlike Females, Male American Goldfinches Do Not Signal Status with Bill Colour

In species in which both sexes have similar ornamentation, the ornaments often function as sexual or social signals in both sexes. However, males and females may use ornaments in different signalling contexts. We previously demonstrated that carotenoid-based bill colour of female American goldfinches, Spinus tristis, functions as a signal of status during intrasexual, but not intersexual, competition. Here we test whether male bill colour functions as a competitive status signal during both intra- and intersexual contests. We tested whether focal males and females avoided feeding adjacent to taxidermic male models as a function of the models’ experimentally altered bill colour. We additionally tested whether male bill colour functions as a mate choice signal by presenting females with a choice of two live males with experimentally altered bill colour. In the status signal experiment, neither focal males nor females avoided male models with more colourful bills, as was predicted by the status-signalling hypothesis. These results indicate that male bill coloration does not function as a signal of competitive status and that the signal function of male bill colour does not parallel that of female bill colour. In our mate choice experiment, females showed no preference for male bill colour, suggesting that male bill colour may have some yet untested signalling function or that male bill colour may no longer be under selection. Our findings suggest that selection can lead to different signalling strategies in males and females, even in species that express mutual ornamentation