Spontaneous circadian rhythms in a cold-Adapted natural isolate of Aureobasidium pullulans

Indexación: Scopus.Circadian systems enable organisms to synchronize their physiology to daily and seasonal environmental changes relying on endogenous pacemakers that oscillate with a period close to 24 h even in the absence of external timing cues. The oscillations are achieved by intracellular transcriptional/translational feedback loops thoroughly characterized for many organisms, but still little is known about the presence and characteristics of circadian clocks in fungi other than Neurospora crassa. We sought to characterize the circadian system of a natural isolate of Aureobasidium pullulans, a cold-Adapted yeast bearing great biotechnological potential. A. pullulans formed daily concentric rings that were synchronized by light/dark cycles and were also formed in constant darkness with a period of 24.5 h. Moreover, these rhythms were temperature compensated, as evidenced by experiments conducted at temperatures as low as 10 °C. Finally, the expression of clock-essential genes, frequency, white collar-1, white collar-2 and vivid was confirmed. In summary, our results indicate the existence of a functional circadian clock in A. pullulans, capable of sustaining rhythms at very low temperatures and, based on the presence of conserved clock-gene homologues, suggest a molecular and functional relationship to well-described circadian systems.https://www.nature.com/articles/s41598-017-14085-

Phases of M2-brane Theories

We investigate different toric phases of 2+1 dimensional quiver gauge theories arising from M2-branes probing toric Calabi-Yau 4 folds. A brane tiling for each toric phase is presented. We apply the 'forward algorithm' to obtain the toric data of the mesonic moduli space of vacua and exhibit the equivalence between the vacua of different toric phases of a given singularity. The structures of the Master space, the mesonic moduli space, and the baryonic moduli space are examined in detail. We compute the Hilbert series and use them to verify the toric dualities between different phases. The Hilbert series, R-charges, and generators of the mesonic moduli space are matched between toric phases.Comment: 60 pages, 28 figures, 6 tables. v2: minor correction

Ontologies for Intelligent e-Theraoy: Application to Obesity

[EN] In this paper we propose a new approach for mental e-health treatments named intelligent e-therapy (e-it) with capabilities for ambient intelligence and ubiquitous computing. The proposed e-it system supposes an evolution of cybertherapy and telepsychology tools used up to now. The e-it system is based in a knowledge base that includes all the knowledge related to the disorder and its treatment. We introduce the use of ontologies as the best option for the design of this knowledge base. We also present a fist e-it system for obesity treatment called etiobeZaragozá Álvarez, I.; Guixeres Provinciale, J.; Alcañiz Raya, ML. (2009). Ontologies for Intelligent e-Theraoy: Application to Obesity. Lecture Notes in Computer Science. 5518:894-901. doi:10.1007/978-3-642-02481-8_136S8949015518Baños, R.M., Botella, C., Perpiñá, C., Alcañiz, M., Lozano, J.A., Osma, J., Gallardo, M.: Virtual reality treatment of flying phobia. IEEE Transactions on Information Technology in Biomedicine 6(3), 206–212 (2002)Botella, C., Baños, R.M., Perpiña, C., et al.: Virtual reality treatment of claustrophobia: a case report. Behaviour Research & Therapy 36, 239–246 (1998)Hu, B., Dasmahapatra, S., Dupplaw, D., Lewis, P., Shadbolt, N.: Reflections on a medical ontology. International Journal of Human- Computer Studies 65(2007), 569–582 (2007)Rubin, D.L., Shah, N.H., Noy, N.F.: Biomedical ontologies: a functional perspective. Briefings in bioinformatics 9(1), 75–90 (2007)Stevens, R., Egaña Aranguren, M., Wolstencroft, K., Sattler, U., Drummond, N., Horridge, M., Rector, A.: Using OWL to model biological knowledge. International Journal of Human-Computer Studies 65(2007), 583–594 (2007)Park, S., Lee, J.K.: Rule identification using ontology while acquiring rules from Web pages. International Journal of Human-Computer Studies 65(2007), 644–658 (2007)Clark, K.L., McCabe, F.G.: Ontology schema for an agent belief store. International Journal of Human-Computer Studies 65(2007), 625–643 (2007)Gruber, T.R.: A Translation Approach to Portable Ontology Specifications. Knowledge Acquisition 5(2), 199–220 (1993)Franco, C., Bengtsson, B., Johannsson, G.: The GH/IGF-1 Axis in Obesity: Physiological and Pathological aspects. Metabolic syndrome and Related Disorders 4, 51–56 (2006

Brane Tilings and M2 Branes

Brane tilings are efficient mnemonics for Lagrangians of N=2 Chern-Simons-matter theories. Such theories are conjectured to arise on M2-branes probing singular toric Calabi-Yau fourfolds. In this paper, a simple modification of the Kasteleyn technique is described which is conjectured to compute the three dimensional toric diagram of the non-compact moduli space of a single probe. The Hilbert Series is used to compute the spectrum of non-trivial scaling dimensions for a selected set of examples.Comment: 47 pages, 23 figure

N=2 solutions of massive type IIA and their Chern-Simons duals

We find explicit AdS4 solutions of massive type IIA with N=2 supersymmetry obtained deforming with a Roman mass the type IIA supersymmetric reduction of the M theory background AdS4 times M111. The family of solutions have SU(3) times SU(3) structure and isometry SU(3) times U(1)^2. They are conjectured to be dual to three-dimensional N=2 Chern-Simons theories with generic Chern-Simons couplings and gauge group ranks.Comment: 20 pages, 1 figure, comments and references adde

Threshold Saturation in Spatially Coupled Constraint Satisfaction Problems

We consider chains of random constraint satisfaction models that are spatially coupled across a finite window along the chain direction. We investigate their phase diagram at zero temperature using the survey propagation formalism and the interpolation method. We prove that the SAT-UNSAT phase transition threshold of an infinite chain is identical to the one of the individual standard model, and is therefore not affected by spatial coupling. We compute the survey propagation complexity using population dynamics as well as large degree approximations, and determine the survey propagation threshold. We find that a clustering phase survives coupling. However, as one increases the range of the coupling window, the survey propagation threshold increases and saturates towards the phase transition threshold. We also briefly discuss other aspects of the problem. Namely, the condensation threshold is not affected by coupling, but the dynamic threshold displays saturation towards the condensation one. All these features may provide a new avenue for obtaining better provable algorithmic lower bounds on phase transition thresholds of the individual standard model

Dynamic Vortex Phases and Pinning in Superconductors with Twin Boundaries

We investigate the pinning and driven dynamics of vortices interacting with twin boundaries using large scale molecular dynamics simulations on samples with near one million pinning sites. For low applied driving forces, the vortex lattice orients itself parallel to the twin boundary and we observe the creation of a flux gradient and vortex free region near the edges of the twin boundary. For increasing drive, we find evidence for several distinct dynamical flow phases which we characterize by the density of defects in the vortex lattice, the microscopic vortex flow patterns, and orientation of the vortex lattice. We show that these different dynamical phases can be directly related to microscopically measurable voltage - current V(I) curves and voltage noise. By conducting a series of simulations for various twin boundary parameters we derive several vortex dynamic phase diagrams.Comment: 5 figures, to appear in Phys. Rev.

Calabi-Yau Volumes and Reflexive Polytopes

We study various geometrical quantities for Calabi–Yau varieties realized as cones over Gorenstein Fano varieties, obtained as toric varieties from reflexive polytopes in various dimensions. Focus is made on reflexive polytopes up to dimension 4 and the minimized volumes of the Sasaki–Einstein base of the corresponding Calabi–Yau cone are calculated. By doing so, we conjecture new bounds for the Sasaki–Einstein volume with respect to various topological quantities of the corresponding toric varieties. We give interpretations about these volume bounds in the context of associated field theories via the AdS/CFT correspondence

Balanço do nitrogênio e fósforo em solo com cultivo orgânico de hortaliças após a incorporação de biomassa de guandu.

Os objetivos deste trabalho foram avaliar os efeitos de faixas de guandu (Cajanus cajan) e da incorporação da biomassa proveniente de sua poda na fertilidade do solo e na produtividade de três hortaliças sob cultivo orgânico. O delineamento usado foi de blocos casualizados completos em esquema de parcelas subsubdivididas com três repetições. As produtividades de beterraba, cenoura e feijão-de-vagem não foram afetadas pelos tratamentos. Nas parcelas onde não houve incorporação da biomassa de guandu, o balanço de nitrogênio no sistema foi negativo, ao passo que com a incorporação, esse balanço foi positivo. Embora tenha ocorrido balanço positivo para o fósforo nas parcelas sem a incorporação de biomassa de guandu, houve um aumento significativo na absorção desse elemento pelas hortaliças quando o material foi incorporado. O sistema de cultivo em aléias de guandu pode representar uma prática vantajosa para os produtores orgânicos, por contribuir na manutenção da fertilidade do solo