Effects of microwave radiation on the digestion of proteins involved in body fluid identification

Body fluid identification plays an important role in understanding how the events during a crime may have taken place. The presence of a body fluid may help identify an individual who committed a crime, while the type of body fluid present may help investigators determine how a crime occurred. Current body fluid identification techniques are not always conclusive and may only suggest the presence of a body fluid type. A protocol developed by the New York City Office of the Chief Medical Examiner (OCME) established a method that confirms body fluid type through mass spectrometry. To identify marker proteins in a body fluid sample, the proteins in the sample must be digested into their smaller peptide fragments. Currently, this digestion is performed with trypsin in an overnight process that takes at least eight hours to complete. Microwave radiation has been shown to assist in the digestion of the body fluid protein samples, and the time needed for digestion reduced from eight hours to just minutes. The effects of microwave radiation on the digestion of protein samples commonly found in body fluids were examined here and compared to traditional methods. Ideal microwave assisted temperature of protein samples was determined to be 37°C, however no significant differences were observed between microwave assisted digestion and the traditional methods of digestion at different incubation times. Overall, this research shows microwave radiation can be used to assist protein digestion, achieving similar results to traditional digestion methods at 37°C

When the Invisible Empire Stormed the Front Range: The Reign of the 1920s Ku Klux Klan in Boulder County, Colorado

During the 1920s, the Ku Klux Klan reemerged in the United States. This second manifestation of the Invisible Empire spread from its traditional homeland in the South to almost every other region in the United States. It gained tremendous support through shrewd campaigning, using modern forms of advertising and by diagnosing local issues in communities and offering idealistic solutions. Racial superiority remained a part of the national platform, but other forms of intolerance came to the forefront. Anti-Catholicism, anti-Semitism, and nativism became segments of a larger “100 percent Americanism” ideology that the Klan hoped to spread throughout the country. Additionally, Klan leaders used a more conservative form of Protestantism to attract more moderately minded white men and women. Other issues that the Klan argued for were improved law and order, education reform, moral authoritarianism and civic engagement. One area in Colorado, Boulder County, had significant Klan activity during the 1920s. The cities of Boulder, Lafayette and Longmont all had local Klan lodges. In different ways, the Invisible Empire’s ideology resonated with some inhabitants of the Boulder County. Unfortunately, this history has been relegated to a few paragraphs in local histories. This thesis analyzes the development of the Klan in each city and provides some preliminary reasons behind the Klan’s ascension and decline in the county

Stage-dependent transient storage of phosphorus in alluvial floodplains

Models for contaminant transport in streams commonly idealize transient storage as a well-mixed but immobile system. These transient storage models capture rapid (near-stream) hyporheic storage and transport, but do not account for large-scale, stage-dependent interaction with the alluvial aquifer. The objective of this research was to document transient storage of phosphorus (P) in coarse gravel alluvium potentially influenced by large-scale, stage-dependent preferential flow pathways (PFPs). Long-term monitoring was performed at floodplain sites adjacent to the Barren Fork Creek and Honey Creek in northeastern Oklahoma. Based on results from subsurface electrical resistivity mapping which was correlated to hydraulic conductivity data, observation wells were installed both in higher hydraulic conductivity and lower hydraulic conductivity subsoils. Water levels in the wells were monitored over time, and water samples were obtained from the observation wells and the stream to document P concentrations at multiple times during high flow events. Contour plots indicating direction of flow were developed using water table elevation data. Contour plots of total P concentrations showed the alluvial aquifer acting as a transient storage zone, with P-laden stream water heterogeneously entering the aquifer during the passage of a storm pulse, and subsequently re-entering the stream during baseflow conditions. Some groundwater in the alluvial floodplains had total P concentrations that mirrored the streams’ total P concentrations. A detailed analysis of P forms indicated that particulate P (i.e. P attached to particulates greater than 0·45 μm) was a significant portion of the P transport. This research suggests the need for more controlled studies on stage-dependent transient storage in alluvial systems

Stage-dependent transient storage of phosphorus in alluvial floodplains

Models for contaminant transport in streams commonly idealize transient storage as a well-mixed but immobile system. These transient storage models capture rapid (near-stream) hyporheic storage and transport, but do not account for large-scale, stage-dependent interaction with the alluvial aquifer. The objective of this research was to document transient storage of phosphorus (P) in coarse gravel alluvium potentially influenced by large-scale, stage-dependent preferential flow pathways (PFPs). Long-term monitoring was performed at floodplain sites adjacent to the Barren Fork Creek and Honey Creek in northeastern Oklahoma. Based on results from subsurface electrical resistivity mapping which was correlated to hydraulic conductivity data, observation wells were installed both in higher hydraulic conductivity and lower hydraulic conductivity subsoils. Water levels in the wells were monitored over time, and water samples were obtained from the observation wells and the stream to document P concentrations at multiple times during high flow events. Contour plots indicating direction of flow were developed using water table elevation data. Contour plots of total P concentrations showed the alluvial aquifer acting as a transient storage zone, with P-laden stream water heterogeneously entering the aquifer during the passage of a storm pulse, and subsequently re-entering the stream during baseflow conditions. Some groundwater in the alluvial floodplains had total P concentrations that mirrored the streams’ total P concentrations. A detailed analysis of P forms indicated that particulate P (i.e. P attached to particulates greater than 0·45 μm) was a significant portion of the P transport. This research suggests the need for more controlled studies on stage-dependent transient storage in alluvial systems

Tunable Correlated Chern Insulator and Ferromagnetism in Trilayer Graphene/Boron Nitride Moir\'e Superlattice

Studies on two-dimensional electron systems in a strong magnetic field first revealed the quantum Hall (QH) effect, a topological state of matter featuring a finite Chern number (C) and chiral edge states. Haldane later theorized that Chern insulators with integer QH effects could appear in lattice models with complex hopping parameters even at zero magnetic field. The ABC-trilayer graphene/hexagonal boron nitride (TLG/hBN) moir\'e superlattice provides an attractive platform to explore Chern insulators because it features nearly flat moir\'e minibands with a valley-dependent electrically tunable Chern number. Here we report the experimental observation of a correlated Chern insulator in a TLG/hBN moir\'e superlattice. We show that reversing the direction of the applied vertical electric field switches TLG/hBN's moir\'e minibands between zero and finite Chern numbers, as revealed by dramatic changes in magneto-transport behavior. For topological hole minibands tuned to have a finite Chern number, we focus on 1/4 filling, corresponding to one hole per moir\'e unit cell. The Hall resistance is well quantized at h/2e2, i.e. C = 2, for |B| > 0.4 T. The correlated Chern insulator is ferromagnetic, exhibiting significant magnetic hysteresis and a large anomalous Hall signal at zero magnetic field. Our discovery of a C = 2 Chern insulator at zero magnetic field should open up exciting opportunities for discovering novel correlated topological states, possibly with novel topological excitations, in nearly flat and topologically nontrivial moir\'e minibands.Comment: 16 pages, 4 figures, and 2 extended figure

Culture of equine fibroblast-like synoviocytes on synthetic tissue scaffolds towards meniscal tissue engineering: a preliminary cell-seeding study

Introduction. Tissue engineering is a new methodology for addressing meniscal injury or loss. Synovium may be an ideal source of cells for in vitro meniscal fibrocartilage formation, however, favorable in vitro culture conditions for synovium must be established in order to achieve this goal. The objective of this study was to determine cellularity, cell distribution, and extracellular matrix (ECM) formation of equine fibroblast-like synoviocytes (FLS) cultured on synthetic scaffolds, for potential application in synovium-based meniscal tissue engineering. Scaffolds included open-cell poly-L-lactic acid (OPLA) sponges and polyglycolic acid (PGA) scaffolds cultured in static and dynamic culture conditions, and PGA scaffolds coated in poly-L-lactic (PLLA) in dynamic culture conditions.Materials and Methods. Equine FLS were seeded on OPLA and PGA scaffolds, and cultured in a static environment or in a rotating bioreactor for 12 days. Equine FLS were also seeded on PGA scaffolds coated in 2% or 4% PLLA and cultured in a rotating bioreactor for 14 and 21 days. Three scaffolds from each group were fixed, sectioned and stained with Masson’s Trichrome, Safranin-O, and Hematoxylin and Eosin, and cell numbers and distribution were analyzed using computer image analysis. Three PGA and OPLA scaffolds from each culture condition were also analyzed for extracellular matrix (ECM) production via dimethylmethylene blue (sulfated glycosaminoglycan) assay and hydroxyproline (collagen) assay. PLLA coated PGA scaffolds were analyzed using double stranded DNA quantification as areflection of cellularity and confocal laser microscopy in a fluorescent cell viability assay.Results. The highest cellularity occurred in PGA constructs cultured in a rotating bioreactor, which also had a mean sulfated glycosaminoglycan content of 22.3 µg per scaffold. PGA constructs cultured in static conditions had the lowest cellularity. Cells had difficulty adhering to OPLA and the PLLA coating of PGA scaffolds; cellularity was inversely proportional to the concentration of PLLA used. PLLA coating did not prevent dissolution of the PGA scaffolds. All cell scaffold types and culture conditions produced non-uniform cellular distribution.Discussion/Conclusion. FLS-seeding of PGA scaffolds cultured in a rotating bioreactor resulted in the most optimal cell and matrix characteristics seen in this study. Cells grew only in the pores of the OPLA sponge, and could not adhere to the PLLA coating of PGA scaffold, due to the hydrophobic property of PLA. While PGA culture in a bioreactor produced measureable GAG, no culture technique produced visible collagen. For this reason, and due to the dissolution of PGA scaffolds, the culture conditions and scaffolds described here are not recommended for inducing fibrochondrogenesis in equine FLS for meniscal tissue engineering

The Berkeley Sample of Stripped-Envelope Supernovae

We present the complete sample of stripped-envelope supernova (SN) spectra observed by the Lick Observatory Supernova Search (LOSS) collaboration over the last three decades: 888 spectra of 302 SNe, 652 published here for the first time, with 384 spectra (of 92 SNe) having photometrically-determined phases. After correcting for redshift and Milky Way dust reddening and reevaluating the spectroscopic classifications for each SN, we construct mean spectra of the three major spectral subtypes (Types IIb, Ib, and Ic) binned by phase. We compare measures of line strengths and widths made from this sample to the results of previous efforts, confirming that O I {\lambda}7774 absorption is stronger and found at higher velocity in Type Ic SNe than in Types Ib or IIb SNe in the first 30 days after peak brightness, though the widths of nebular emission lines are consistent across subtypes. We also highlight newly available observations for a few rare subpopulations of interest.Comment: 13 pages; 14 figures; 3 tables. Accepted for publication in MNRA

Optical Spectropolarimetry of the GRB 020813 Afterglow

The optical afterglow of gamma-ray burst 020813 was observed for 3 hours with the LRIS spectropolarimeter at the Keck-I telescope, beginning 4.7 hours after the burst was detected by HETE-2. The spectrum reveals numerous metal absorption lines that we identify with two systems at z=1.223 and z=1.255. We also detect an O II 3727 emission line at z=1.255 and we identify this galaxy as the likely host of the GRB. After a correction for Galactic interstellar polarization, the optical afterglow has a linear polarization of 1.8-2.4% during 4.7-7.9 hours after the burst. A measurement of p = 0.80% +/- 0.16% on the following night by Covino et al. demonstrates significant polarization variability over the next 14 hours. The lack of strong variability in the position angle of linear polarization indicates that the magnetic field in the jet is likely to be globally ordered rather than composed of a number of randomly oriented cells. Within the framework of afterglow models with collimated flows, the relatively low observed polarization suggests that the magnetic field components perpendicular and parallel to the shock front are only different by about 20%.Comment: To appear in ApJ Letters. 6 pages including 2 figure