496 research outputs found
The rise and fall of a secondary policy: la Joyanca (Guatemala)
International audiencePaleoenvironmental studies have recently made impressive contributions to our understanding of the Maya Lowland Terminal Classic crisis. They put much emphasis on the detection of drought episodes during the ninth century and later. There is no doubt that such events had an impact on Maya sociopolitical dynamics, although ninth-century droughts may have entailed relatively moderate rainfall reduction.Not only Maya agriculture but also urban populations were vulnerable to variation in precipitation.Moreover, the impact of reconstructed climatic events does not appear to have been as direct and synchronous as we would expect, and the concatenation of environmental and sociopolitical factors remains poorly investigated
Epstein–Barr virus-mediated transformation of B cells induces global chromatin changes independent to the acquisition of proliferation
Epstein-Barr virus (EBV) infects and transforms human primary B cells inducing indefinite proliferation. To investigate the potential participation of chromatin mechanisms during the EBV-mediated transformation of resting B cells we performed an analysis of global changes in histone modifications. We observed a remarkable decrease and redistribution of heterochromatin marks including H4K20me3, H3K27me3 and H3K9me3. Loss of H4K20me3 and H3K9me3 occurred at constitutive heterochromatin repeats. For H3K27me3 and H3K9me3, comparison of ChIP-seq data revealed a decrease in these marks in thousands of genes, including clusters of HOX and ZNF genes, respectively. Moreover, DNase-seq data comparison between resting and EBV-transformed B cells revealed increased endonuclease accessibility in thousands of genomic sites. We observed that both loss of H3K27me3 and increased accessibility are associated with transcriptional activation. These changes only occurred in B cells transformed with EBV and not in those stimulated to proliferate with CD40L/IL-4, despite their similarities in the cell pathways involved and proliferation rates. In fact, B cells infected with EBNA-2 deficient EBV, which have much lower proliferation rates, displayed similar decreases for heterochromatic histone marks. Our study describes a novel phenomenon related to transformation of B cells, and highlights its independence of the pure acquisition of proliferation
Inference of proto-neutron star properties in core-collapse supernovae from a gravitational-wave detector network
The next Galactic core-collapse supernova (CCSN) will be a unique opportunity
to study within a fully multi-messenger approach the explosion mechanism
responsible for the formation of neutron stars and stellar-mass black holes.
State-of-the-art numerical simulations of those events reveal the complexity of
the gravitational-wave emission which is highly stochastic. This challenges the
possibility to infer the properties of the compact remnant and of its
progenitor using the information encoded in the waveforms. In this paper we
take further steps in a program we recently initiated to overcome those
difficulties. In particular we show how oscillation modes of the proto-neutron
star, highly visible in the gravitational-wave signal, can be used to
reconstruct the time evolution of their physical properties. Extending our
previous work where only the information from a single detector was used we
here describe a new data-analysis pipeline that coherently combines
gravitational-wave detectors' data and infers the time evolution of a
combination of the mass and radius of the compact remnant. The performance of
the method is estimated employing waveforms from 2D and 3D CCSN simulations
covering a progenitor mass range between 11\, and
40\, and different equations of state for both a network of
up to five second-generation detectors and the proposed third-generation
detectors Einstein Telescope and Cosmic Explorer. Our study shows that it will
be possible to infer PNS properties for CCSN events occurring in the vicinity
of the Milky Way, up to the Large Magellanic Cloud, with the current generation
of gravitational-wave detectors
Trnp1 organizes diverse nuclear membrane‐less compartments in neural stem cells
TMF1‐regulated nuclear protein 1 (Trnp1) has been shown to exert potent roles in neural development affecting neural stem cell self‐renewal and brain folding, but its molecular function in the nucleus is still unknown. Here, we show that Trnp1 is a low complexity protein with the capacity to phase separate. Trnp1 interacts with factors located in several nuclear membrane‐less organelles, the nucleolus, nuclear speckles, and condensed chromatin. Importantly, Trnp1 co‐regulates the architecture and function of these nuclear compartments in vitro and in the developing brain in vivo. Deletion of a highly conserved region in the N‐terminal intrinsic disordered region abolishes the capacity of Trnp1 to regulate nucleoli and heterochromatin size, proliferation, and M‐phase length; decreases the capacity to phase separate; and abrogates most of Trnp1 protein interactions. Thus, we identified Trnp1 as a novel regulator of several nuclear membrane‐less compartments, a function important to maintain cells in a self‐renewing proliferative state
Another look at the BL Lacertae flux and spectral variability
The GLAST-AGILE Support Program (GASP) of the Whole Earth Blazar Telescope
(WEBT) monitored BL Lacertae in 2008-2009 at radio, near-IR, and optical
frequencies. During this period, high-energy observations were performed by
XMM-Newton, Swift, and Fermi. We analyse these data with particular attention
to the calibration of Swift UV data, and apply a helical jet model to interpret
the source broad-band variability. The GASP-WEBT observations show an optical
flare in 2008 February-March, and oscillations of several tenths of mag on a
few-day time scale afterwards. The radio flux is only mildly variable. The UV
data from both XMM-Newton and Swift seem to confirm a UV excess that is likely
caused by thermal emission from the accretion disc. The X-ray data from
XMM-Newton indicate a strongly concave spectrum, as well as moderate flux
variability on an hour time scale. The Swift X-ray data reveal fast (interday)
flux changes, not correlated with those observed at lower energies. We compare
the spectral energy distribution (SED) corresponding to the 2008 low-brightness
state, which was characterised by a synchrotron dominance, to the 1997 outburst
state, where the inverse-Compton emission was prevailing. A fit with an
inhomogeneous helical jet model suggests that two synchrotron components are at
work with their self inverse-Compton emission. Most likely, they represent the
radiation from two distinct emitting regions in the jet. We show that the
difference between the source SEDs in 2008 and 1997 can be explained in terms
of pure geometrical variations. The outburst state occurred when the
jet-emitting regions were better aligned with the line of sight, producing an
increase of the Doppler beaming factor. Our analysis demonstrates that the jet
geometry can play an extremely important role in the BL Lacertae flux and
spectral variability.Comment: 12 pages, 10 figures, accepted for publication in A&
Multifrequency monitoring of the blazar 0716+714 during the GASP-WEBT-AGILE campaign of 2007
Since the CGRO operation in 1991-2000, one of the primary unresolved
questions about the blazar gamma-ray emission has been its possible correlation
with the low-energy (in particular optical) emission. To help answer this
problem, the Whole Earth Blazar Telescope (WEBT) consortium has organized the
GLAST-AGILE Support Program (GASP) to provide the optical-to-radio monitoring
data to be compared with the gamma-ray detections by the AGILE and GLAST
satellites. This new WEBT project started in early September 2007, just before
a strong gamma-ray detection of 0716+714 by AGILE. We present the GASP-WEBT
optical and radio light curves of this blazar obtained in July-November 2007,
about various AGILE pointings at the source. We construct NIR-to-UV spectral
energy distributions (SEDs), by assembling GASP-WEBT data together with UV data
from the Swift ToO observations of late October. We observe a contemporaneous
optical-radio outburst, which is a rare and interesting phenomenon in blazars.
The shape of the SEDs during the outburst appears peculiarly wavy because of an
optical excess and a UV drop-and-rise. The optical light curve is well sampled
during the AGILE pointings, showing prominent and sharp flares. A future
cross-correlation analysis of the optical and AGILE data will shed light on the
expected relationship between these flares and the gamma-ray events.Comment: 5 pages, 5 figures, to be published in A&A (Letters); revised to
match the final version (changes in Fig. 5 and related text
The serum proteome of Atlantic salmon, Salmo salar, during pancreas disease (PD) following infection with salmonid alphavirus subtype 3 (SAV3)
Salmonid alphavirus is the aetological agent of pancreas disease (PD) in marine Atlantic salmon, Salmo salar, and rainbow trout, Oncorhynchus mykiss, with most outbreaks in Norway caused by SAV subtype 3 (SAV3). This atypical alphavirus is transmitted horizontally causing a significant economic impact on the aquaculture industry. This histopathological and proteomic study, using an established cohabitational experimental model, investigated the correlation between tissue damage during PD and a number of serum proteins associated with these pathologies in Atlantic salmon. The proteins were identified by two-dimensional electrophoresis, trypsin digest and peptide MS/MS fingerprinting. A number of humoral components of immunity which may act as biomarkers of the disease were also identified. For example, creatine kinase, enolase and malate dehydrogenase serum concentrations were shown to correlate with pathology during PD. In contrast, hemopexin, transferrin, and apolipoprotein, amongst others, altered during later stages of the disease and did not correlate with tissue pathologies. This approach has given new insight into not only PD but also fish disease as a whole, by characterisation of the protein response to infection, through pathological processes to tissue recovery.
Biological significance:
Salmonid alphavirus causes pancreas disease (PD) in Atlantic salmon, Salmo salar, and has a major economic impact on the aquaculture industry. A proteomic investigation of the change to the serum proteome during PD has been made with an established experimental model of the disease. Serum proteins were identified by two-dimensional electrophoresis, trypsin digest and peptide MS/MS fingerprinting with 72 protein spots being shown to alter significantly over the 12 week period of the infection. The concentrations of certain proteins in serum such as creatine kinase, enolase and malate dehydrogenase were shown to correlate with tissue pathology while other proteins such as hemopexin, transferrin, and apolipoprotein, altered in concentration during later stages of the disease and did not correlate with tissue pathologies. The protein response to infection may be used to monitor disease progression and enhance understanding of the pathology of PD
Radio-to-UV monitoring of AO 0235+164 by the WEBT and Swift during the 2006--2007 outburst
The blazar AO 0235+164 was claimed to show a quasi-periodic behaviour in the
radio and optical bands. Moreover, an extra emission component contributing to
the UV and soft X-ray flux was detected, whose nature is not yet clear. A
predicted optical outburst was observed in late 2006/early 2007. We here
present the radio-to-optical WEBT light curves during the outburst, together
with UV data acquired by Swift in the same period. We found the optical
outburst to be as strong as the big outbursts of the past: starting from late
September 2006, a brightness increase of 5 mag led to the outburst peak in
February 19-21, 2007. We also observed an outburst at mm and then at cm
wavelengths, with an increasing time delay going toward lower frequencies
during the rising phase. Cross-correlation analysis indicates that the 1 mm and
37 GHz flux variations lagged behind the R-band ones by about 3 weeks and 2
months, respectively. These short time delays suggest that the corresponding
jet emitting regions are only slightly separated and/or misaligned. In
contrast, during the outburst decreasing phase the flux faded contemporaneously
at all cm wavelengths. This abrupt change in the emission behaviour may suggest
the presence of some shutdown mechanism of intrinsic or geometric nature. The
behaviour of the UV flux closely follows the optical and near-IR one. By
separating the synchrotron and extra component contributions to the UV flux, we
found that they correlate, which suggests that the two emissions have a common
origin.Comment: 9 pages, 7 figures, in press for Astronomy and Astrophysic
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