Brazilian Ironstone Plant Communities as Reservoirs of Culturable Bacteria With Diverse Biotechnological Potential

Extensive mineral extractivism in the Brazilian Iron Quadrangle (IQ) region has destroyed large areas of land, decimating plant species, and their associated microbiota. Very little is known about the microbiota of the region; hence, cultivable bacteria associated with plants of its soils were investigated for their biotechnological potential. Samples were collected from nine plant species and six soils, and 65 cultivable bacterial isolates were obtained. These represent predominantly gram-positive bacilli (70%) capable of producing amylases (55%), proteases (63%), cellulases (47%), indole acetic acid (IAA) (46%), siderophores (26%), and to solubilize phosphate (9%). In addition, 65% of these were resistant to ampicillin, 100% were sensitive to tetracycline, and 97% were tolerant to high arsenic concentrations. Three isolates were studied further: the isolate FOB3 (Rosenbergiella sp.) produced high concentrations of IAA in vitro in the absence of tryptophan – shown by the significant improvement in plant germination and growth rate where the isolate was present. For isolates C25 (Acinetobacter sp.) and FG3 (Serratia sp.), plasmids were purified and inserted into Escherichia coli cells where they modified the physiological profile of the transformed strains. The E. coli::pFG3B strain showed the highest capacity for biofilm production, as well as an increase in the replication rate, arsenic tolerance and catalase activity. Moreover, this strain increased DNA integrity in the presence of arsenic, compared to the wild-type strain. These results help to explain the importance of bacteria in maintaining plant survival in ferruginous, rocky soils, acting as plant growth promoters, and to highlight the biotechnological potential of these bacteria.IMPORTANCE The Iron Quadrangle region is responsible for ∼60% of all Brazilian iron production and, at the same time, is responsible for housing a wide diversity of landscapes, and consequently, a series of endemic plant species and dozens of rare species – all of which have been poorly studied. Studies exploring the microbiota associated with these plant species are limited and in the face of the continuous pressure of extractive action, some species along with their microbiota are being decimated. To understand the potential of this microbiota, we discovered that cultivable bacterial isolates obtained from plants in the ferruginous rocky soil of the Iron Quadrangle region have diverse biotechnological potential, revealing a genetic ancestry still unknown

Pervasive gaps in Amazonian ecological research

Biodiversity loss is one of the main challenges of our time,1,2 and attempts to address it require a clear un derstanding of how ecological communities respond to environmental change across time and space.3,4 While the increasing availability of global databases on ecological communities has advanced our knowledge of biodiversity sensitivity to environmental changes,5–7 vast areas of the tropics remain understudied.8–11 In the American tropics, Amazonia stands out as the world’s most diverse rainforest and the primary source of Neotropical biodiversity,12 but it remains among the least known forests in America and is often underrepre sented in biodiversity databases.13–15 To worsen this situation, human-induced modifications16,17 may elim inate pieces of the Amazon’s biodiversity puzzle before we can use them to understand how ecological com munities are responding. To increase generalization and applicability of biodiversity knowledge,18,19 it is thus crucial to reduce biases in ecological research, particularly in regions projected to face the most pronounced environmental changes. We integrate ecological community metadata of 7,694 sampling sites for multiple or ganism groups in a machine learning model framework to map the research probability across the Brazilian Amazonia, while identifying the region’s vulnerability to environmental change. 15%–18% of the most ne glected areas in ecological research are expected to experience severe climate or land use changes by 2050. This means that unless we take immediate action, we will not be able to establish their current status, much less monitor how it is changing and what is being lostinfo:eu-repo/semantics/publishedVersio

ATLANTIC EPIPHYTES: a data set of vascular and non-vascular epiphyte plants and lichens from the Atlantic Forest

Epiphytes are hyper-diverse and one of the frequently undervalued life forms in plant surveys and biodiversity inventories. Epiphytes of the Atlantic Forest, one of the most endangered ecosystems in the world, have high endemism and radiated recently in the Pliocene. We aimed to (1) compile an extensive Atlantic Forest data set on vascular, non-vascular plants (including hemiepiphytes), and lichen epiphyte species occurrence and abundance; (2) describe the epiphyte distribution in the Atlantic Forest, in order to indicate future sampling efforts. Our work presents the first epiphyte data set with information on abundance and occurrence of epiphyte phorophyte species. All data compiled here come from three main sources provided by the authors: published sources (comprising peer-reviewed articles, books, and theses), unpublished data, and herbarium data. We compiled a data set composed of 2,095 species, from 89,270 holo/hemiepiphyte records, in the Atlantic Forest of Brazil, Argentina, Paraguay, and Uruguay, recorded from 1824 to early 2018. Most of the records were from qualitative data (occurrence only, 88%), well distributed throughout the Atlantic Forest. For quantitative records, the most common sampling method was individual trees (71%), followed by plot sampling (19%), and transect sampling (10%). Angiosperms (81%) were the most frequently registered group, and Bromeliaceae and Orchidaceae were the families with the greatest number of records (27,272 and 21,945, respectively). Ferns and Lycophytes presented fewer records than Angiosperms, and Polypodiaceae were the most recorded family, and more concentrated in the Southern and Southeastern regions. Data on non-vascular plants and lichens were scarce, with a few disjunct records concentrated in the Northeastern region of the Atlantic Forest. For all non-vascular plant records, Lejeuneaceae, a family of liverworts, was the most recorded family. We hope that our effort to organize scattered epiphyte data help advance the knowledge of epiphyte ecology, as well as our understanding of macroecological and biogeographical patterns in the Atlantic Forest. No copyright restrictions are associated with the data set. Please cite this Ecology Data Paper if the data are used in publication and teaching events. © 2019 The Authors. Ecology © 2019 The Ecological Society of Americ

Pervasive gaps in Amazonian ecological research

Biodiversity loss is one of the main challenges of our time,1,2 and attempts to address it require a clear understanding of how ecological communities respond to environmental change across time and space.3,4 While the increasing availability of global databases on ecological communities has advanced our knowledge of biodiversity sensitivity to environmental changes,5,6,7 vast areas of the tropics remain understudied.8,9,10,11 In the American tropics, Amazonia stands out as the world's most diverse rainforest and the primary source of Neotropical biodiversity,12 but it remains among the least known forests in America and is often underrepresented in biodiversity databases.13,14,15 To worsen this situation, human-induced modifications16,17 may eliminate pieces of the Amazon's biodiversity puzzle before we can use them to understand how ecological communities are responding. To increase generalization and applicability of biodiversity knowledge,18,19 it is thus crucial to reduce biases in ecological research, particularly in regions projected to face the most pronounced environmental changes. We integrate ecological community metadata of 7,694 sampling sites for multiple organism groups in a machine learning model framework to map the research probability across the Brazilian Amazonia, while identifying the region's vulnerability to environmental change. 15%–18% of the most neglected areas in ecological research are expected to experience severe climate or land use changes by 2050. This means that unless we take immediate action, we will not be able to establish their current status, much less monitor how it is changing and what is being lost

Life-forms, pollination and seed dispersal syndromes in plant communities on ironstone outcrops, SE Brazil Formas de vida, síndromes de polinização e dispersão de sementes em comunidades vegetais sobre afloramentos ferruginosos, SE do Brasil

Rock outcrops play an important role in enhancing plant diversity in montane ecosystems. Ironstone outcrops (cangas) are among the lithotypes less known and most threatened in SE Brazil, due to mining activities. Besides species composition, a key feature to promote their conservation and restoration is the knowledge of the community prevalent life-forms, pollination and seed dispersal syndromes. The analyses were done based on published floristic surveys of cangas in SE Brazil. A total of 353 species of angiosperms (70 families) were assigned to one of the two predominant physiognomies (open areas and forest islands) on ironstone outcrops. Sixteen families responded for 70% of all species. Compared to Raunkiaer's spectrum, phanerophytes were over- and therophytes were under-represented. Phanerophytes were the predominant life-form in forest islands, while hemicryptophytes were outstanding in open areas. Entomophily was the dominant pollination syndrome in both habitats. Zoochory was dominant in forest islands and ranked last in open areas, where anemochory and autochory prevailed. Considering that both forest islands and open areas are subjected to the same climatic conditions, the results corroborate the influence of geoedaphic components in the three traits analysed.Afloramentos rochosos têm um papel importante na diversidade vegetal de ecossistemas montanos. As cangas (afloramentos ferruginosos) estão entre os litotipos menos conhecidos e mais ameaçados do sudeste do Brasil, devido às atividades minerarias. Além da composição de espécies, um aspecto fundamental para promover sua conservação e restauração é o conhecimento das formas de vida, síndromes de polinização e dispersão de sementes dominantes. As análises foram baseadas em listas florísticas publicadas de cangas do sudeste do Brasil. Um total de 353 espécies de angiospermas (70 famílias) foi distribuído entre as duas fisionomias predominantes (áreas abertas e capões de mata) em cangas. Dezesseis famílias foram responsáveis por 70% do total de espécies. Comparado ao espectro normal de Raunkiaer, fanerófitos estiveram super-representados e terófitos sub-representados. Os primeiros foram a forma de vida predominante em capões, enquanto que os hemicriptófitos o foram em áreas abertas. A entomofilia foi a síndrome de polinização dominante em ambos os hábitats. A zoocoria foi dominante em capões e foi última em áreas abertas, onde a anemocoria e autocoria prevaleceram. Considerando que ambas as fisionomias estão sujeitas às mesmas condições climáticas, os resultados corroboram a influência de componentes geoedáficos nos três atributos analisados

A vegetação de canga no Quadrilátero Ferrífero, Minas Gerais: caracterização e contexto fitogeográfico

A vegetação nas cangas (afloramentos ferruginosos) abriga dezenas de espécies raras, várias novidades taxonômicas e elevada diversidade alfa e beta. Utilizando um banco de dados constituído por 1.080 táxons de angiospermas, a vegetação associada às cangas no Quadrilátero Ferrífero foi caracterizada a partir dos elementos florísticos, das formas de crescimento e das fisionomias mais frequentes. Analisou-se a distribuição geográfica e os domínios fitogeográficos de 980 espécies. Ainda, com o objetivo de verificar se há distinção entre a vegetação das cangas em relação às de cinco áreas inseridas em sistemas rupestres de Minas Gerais e Bahia, analisou-se a similaridade a partir do número de espécies de 920 gêneros de angiospermas. Em comparação aos sistemas quartzíticos, principalmente os inseridos na Cadeia do Espinhaço, pode-se distinguir a vegetação das cangas pela maior influência de elementos florísticos do domínio Atlântico, maior frequência de sinúsias formadas por árvores e arbustos, riqueza elevada de espécies de gêneros como Solanum e Cattleya e pouca representatividade fisionômica de alguns gêneros típicos dos campos rupestres. Essa distinção parece correlacionar-se com a localização geográfica do Quadrilátero e com as características geomorfológicas e mineralógicas das cangas