Results of Millikan Library Forced Vibration Testing

This report documents an investigation into the dynamic properties of Millikan Library under forced excitation. On July 10, 2002, we performed frequency sweeps from 1 Hz to 9.7 Hz in both the East-West (E-W) and North-South (N-S) directions using a roof level vibration generator. Natural frequencies were identified at 1.14 Hz (E-W fundamental mode), 1.67 Hz (N-S fundamental mode), 2.38 Hz (Torsional fundamental mode), 4.93 Hz (1st E-Wovertone), 6.57 Hz (1st Torsional overtone), 7.22 Hz (1st N-S overtone), and at 7.83 Hz (2nd E-Wovertone). The damping was estimated at 2.28% for the fundamental E-W mode and 2.39% for the N-S fundamental mode. On August 28, 2002, a modal analysis of each natural frequency was performed using the dense instrumentation network located in the building. For both the E-W and N-S fundamental modes, we observe a nearly linear increase in displacement with height, except at the ground floor which appears to act as a hinge. We observed little basement movement for the E-W mode, while in the N-S mode 30% of the roof displacement was due to basement rocking and translation. Both the E-W and N-S fundamental modes are best modeled by the first mode of a theoretical bending beam. The higher modes are more complex and not well represented by a simple structural system

Morphological and Genetic Variation in Mexican Wild Populations ofTamarixia radiata(Hymenoptera: Eulophidae)

En el presente estudio se analizó la variación morfológica y genética del ectoparasitoide ninfal del psílido asiático de los cítricos Tamarixia radiata (Waterston) (Hymenoptera: Eulophidae) en dos regiones de México, región noreste (representada por los estados de Nuevo León, y Tamaulipas) y región occidente (representada por los estados de Colima y Michoacán). Se encontró que la variación morfológica de los especímenes analizados recae principalmente en variables cromáticas. En el estudio morfométrico se encontró que a diferencia de las hembras, los machos presentan heterogeneidad, la cual se concentró en el estado de Colima. La variación morfológica en el parasitoide no se asoció de forma exclusiva por alguna de las zonas geográficas de estudio. El análisis molecular reveló la presencia de dos haplotipos (H1 y H2), los cuales se han encontrado en investigaciones previas entre las poblaciones del parasitoide introducidas a Florida, E.U.A. El haplotipo H2 se encontró en todas las áreas de estudio y con mayor frecuencia que el H1, el cual se localizó solamente en la región noreste (estado de Tamaulipas), sugiriendo posibles puntos de flujo génico entre México-E.U.A. Los resultados poseen implicaciones para el uso extensivo de T. radiata en los programas de control biológico del psílido asiático de los cítricos. ABSTRACT We analyzed the morphological and genetic variation of the Asian citrus psyllid nymphal ectoparasitoid Tamarixia radiata (Waterston) (Hymenoptera: Eulophidae) in 2 regions of Mexico, in the northeast (represented by the states of Nuevo León and Tamaulipas) and the west (represented by the states of Colima and Michoacán). We found that the morphological variation of the specimens lay mainly in body color traits. The morphometric study indicated that in comparison with females, males presented heterogeneity, and it was concentrated in the state of Colima. Despite the morphological variation found in the species, it was not exclusively associated with any of the geographical regions. Molecular analysis revealed the presence of 2 haplotypes (H1 and H2), which were the same found in previous research among strains introduced to Florida. Haplotype H2 was found in both studied regions and more frequently than haplotype H1, which was collected only in the northeast (Tamaulipas state), suggesting possible points of gene flow between Mexico and the USA. Our results have implications for the extensive use of T. radiata in biological control programs of the Asian citrus psyllid

Enzymatic extraction of hydroxycinnamic acids from coffee pulp

Ferulic, caffeic, p-coumaric and chlorogenic acids are classified as hydroxycinnamic acids, presenting anticarcinogenic, anti-inflammatory and antioxidant properties. In this work, enzymatic extraction has been studied in order to extract high value-added products like hydroxycinnamic acids from coffee pulp. A commercial pectinase and enzyme extract produced by Rhizomucor pusillus strain 23aIV in solid-state fermentation using olive oil or coffee pulp (CP) as an inducer of the feruloyl esterase activity were evaluated separately and mixed. The total content (covalently linked and free) of ferulic, caffeic, p-coumaric and chlorogenic acids was 5276 mg per kg of coffee pulp. Distribution was as follows (in %): chlorogenic acid 58.7, caffeic acid 37.6, ferulic acid 2.1 and p-coumaric acid 1.5. Most of the hydroxycinnamic acids were covalently bound to the cell wall (in %): p-coumaric acid 97.2, caffeic acid 94.4, chlorogenic acid 76.9 and ferulic acid 73.4. The content of covalently linked hydroxycinnamic acid was used to calculate the enzyme extraction yield. The maximum carbon dioxide rate for the solid-state fermentation using olive oil as an inducer was higher and it was reached in a short cultivation time. Nevertheless, the feruloyl esterase (FAE) activity (units per mg of protein) obtained in the fermentation using CP as an inducer was 31.8 % higher in comparison with that obtained in the fermentation using olive oil as the inducer. To our knowledge, this is the first report indicating the composition of both esterified and free ferulic, caffeic, p-coumaric and chlorogenic acids in coffee pulp. The highest yield of extraction of hydroxycinnamic acids was obtained by mixing the produced enzyme extract using coffee pulp as an inducer and a commercial pectinase. Extraction yields were as follows (in %): chlorogenic acid 54.4, ferulic acid 19.8, p-coumaric acid 7.2 and caffeic acid 2.3. An important increase in the added value of coffee pulp was mainly due to the extraction of chlorogenic acid

Headgroup Structure and Cation Binding in Phosphatidylserine Lipid Bilayers

Phosphatidylserine (PS) is a negatively charged lipid type commonly found in eukaryotic membranes, where it interacts with proteins via nonspecific electrostatic interactions as well as via specific binding. Moreover, in the presence of calcium ions, PS lipids can induce membrane fusion and phase separation. Molecular details of these phenomena remain poorly understood, partly because accurate models to interpret the experimental data have not been available. Here we gather a set of previously published experimental NMR data of C-H bond order parameter magnitudes, vertical bar S-CH vertical bar, for pure PS and mixed PS:PC (phosphatidylcholine) lipid bilayers and augment this data set by measuring the signs of S-CH in the PS headgroup using S-DROSS solid-state NMR spectroscopy. The augmented data set is then used to assess the accuracy of the PS headgroup structures in, and the cation binding to, PS-containing membranes in the most commonly used classical molecular dynamics (MD) force fields including CHARMM36, Lipidl7, MacRog, Slipids, GROMOS-CKP, Berger, and variants. We show large discrepancies between different force fields and that none of them reproduces the NMR data within experimental accuracy. However, the best MD models can detect the most essential differences between PC and PS headgroup structures. The cation binding affinity is not captured correctly by any of the PS force fields-an observation that is in line with our previous results for PC lipids. Moreover, the simulated response of the PS headgroup to bound ions can differ from experiments even qualitatively. The collected experimental data set and simulation results will pave the way for development of lipid force fields that correctly describe the biologically relevant negatively charged membranes and their interactions with ions. This work is part of the NMRlipids open collaboration project (nmrlipids.blogspot.fi).Peer reviewe

A multi-site study on walkability, data sharing and privacy perception using mobile sensing data gathered from the mk-sense platform

Walking is a fundamental part of a physically active lifestyle, it is one of everyday activities that positively impacts health and wellbeing. In this paper we describe the challenges and experiences of conducting a sensing campaign in the wild. We make use of mk-sense; a software platform to facilitate the deployment of collaborative sensing campaigns. We elaborate on two cross-cultural studies conducted in four different countries (Mexico, Turkey, Spain, and Switzerland) with a total of 77 participants. We present a detailed description of the data collected from one of the studies aimed at measuring walkability around three different university campuses. The analysis of the data shows that walkability can be assessed using information from the sensors in the smartphones and results from surveys answered by participants. In addition, we analyze issues about data sharing and privacy awareness

Apple pomace powder as natural food ingredient in bakery jams

The aim of the present study was to investigate whether apple pomace powder produced by a simple drying method is suitable for replacing pectin in bakery jam products. Rheological properties of bakery jams were tested by oscillatory tests using amplitude sweep method. Apple pomace addition decreased gel strength and stability of bakery jams, while 12-month storage increased the gel strength of samples. Based on our results, dried apple pomace powder seems to be suitable to replace pectin up to 40% without changing rheological properties of bakery jams

Inverse Conformational Selection in Lipid–Protein Binding

Interest in lipid interactions with proteins and other biomolecules is emerging not only in fundamental biochemistry but also in the field of nanobiotechnology where lipids are commonly used, for example, in carriers of mRNA vaccines. The outward-facing components of cellular membranes and lipid nanoparticles, the lipid headgroups, regulate membrane interactions with approaching substances, such as proteins, drugs, RNA, or viruses. Because lipid headgroup conformational ensembles have not been experimentally determined in physiologically relevant conditions, an essential question about their interactions with other biomolecules remains unanswered: Do headgroups exchange between a few rigid structures, or fluctuate freely across a practically continuous spectrum of conformations? Here, we combine solid-state NMR experiments and molecular dynamics simulations from the NMRlipids Project to resolve the conformational ensembles of headgroups of four key lipid types in various biologically relevant conditions. We find that lipid headgroups sample a wide range of overlapping conformations in both neutral and charged cellular membranes, and that differences in the headgroup chemistry manifest only in probability distributions of conformations. Furthermore, the analysis of 894 protein-bound lipid structures from the Protein Data Bank suggests that lipids can bind to proteins in a wide range of conformations, which are not limited by the headgroup chemistry. We propose that lipids can select a suitable headgroup conformation from the wide range available to them to fit the various binding sites in proteins. The proposed inverse conformational selection model will extend also to lipid binding to targets other than proteins, such as drugs, RNA, and viruses