How do gold nanowires break?

Suspended gold nanowires have recently been made in an ultrahigh vacuum and were imaged by electron microscopy. Using realistic molecular dynamics simulation, we study the mechanisms of formation, evolution, and breaking of these atomically thin Au nanowires under stress. We show how defects induce the formation of constrictions that eventually will form the one-atom chains. We find that these chains, before breaking, are five atoms long, which is in excellent agreement with experimental results. After the nanowire's rupture, we analyze the structure of the Au tip, which we believe will be universally present due to its highly symmetric nature.872

Mechanochemistry in Cu nanowires: N and N-2 enhancing the atomic chain formation

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)We show using ab initio total-energy calculations based on density-functional theory how H, B, C, N, O, S, and N-2 impurities incorporated to thin copper nanowires could affect their mechanical properties and electronic structure. An interesting mechanochemical effect arises from the insertion of N and N-2 in the linear atomic chain. These impurities form not only stable but also very strong p-d bonds, in such a way that they can extract atoms from a stable tip enhancing the atomic chain suggesting the possibility to pull a string of copper atoms through the production of copper nanowires in nitrogen atmospheres.8215Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES

Helical [110] gold nanowires make longer linear atomic chains

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Quantum mechanical molecular dynamics shows that gold nanowires formed along the [110] direction reconstruct upon stress to form helical nanowires. The mechanism for this formation is discussed. These helical nanowires evolve on stretching to form linear atomic chains. Because helical nanowires do not form symmetrical tips, a requirement to stop the growth of atomic chains, these nanowires produce longer atomic chains than other nanowires. These results are obtained resorting to the use of tight-binding molecular dynamics and ab initio electronic structure calculations.10112Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES

Study of defects in Pd thin films on Au(100) using molecular dynamics

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)We used molecular dynamics with embedded-atom method to model the growth of a Pd thin film deposited on Au(100) for a system with approximately 100 000 atoms. We showed that the Pd film grew under stress on the Au substrate with face-centered-cubic structure. After the deposition of 9 monolayers, the stress stored in the Pd film relaxed with the formation of defects, stacking faults in the structure of Pd forming a pattern of deformation in the film. We analyzed the structures obtained in the simulation using the centrosymmetry parameter and angular distribution functions proposed by Ackland and Jones. Analysis of monolayer spacing, coordination number, and normal compressive strain for small deformation are presented. To quantitatively access the defect formation we also measured the stress tensor evolution during growth, which clearly showed the change in structure. All these results were in agreement with the structure analysis giving a nice understanding of the formation of these defected structures.8119Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES

Theoretical study of the formation, evolution, and breaking of gold nanowires

Real time imaging experiments with metal nanowires (NWs), in particular gold under stress, that show their formation, evolution, and breaking, were obtained with high resolution electron microscopy. In order to understand these results, we use density functional theory (DFT) based methods to simulate the evolution of Au NWs. First we use a tight-binding molecular dynamics (TBMD) method to understand the mechanisms of formation of very thin gold NWs. We present realistic simulations for the breaking of these NWs, whose main features are very similar to the experimental results. We show how defects lead to the formation of one-atom constrictions in the Au NW, which evolves into a one-atom-thick necklace chain. Similarly to the experimental results, we obtain that these necklaces can get as long as five-atoms from apex to apex. Before breaking, we obtain relatively large Au-Au bond distances, of the order of 3.0-3.1 Angstrom. A further pull of the wire causes a sudden increase of one of the bond distances, indicating the breaking of the NW. To get some more insight into the electronic structure aspects of this problem, we considered several of our tight-binding structures before breaking and studied them in detail using an ab initio method based on the DFT. By pulling the wire quasi-statically in this case, we also observed the breaking of the wire at similar distances as in the TBMD. This result was independent of the exchange-correlation potential used-either the local density approximation (LDA) or the generalized gradient approximation (GGA). The pulling force before rupture was obtained as 2.4 nN for the LDA, and 1.9 nN for the GGA. Finally, we also present a detailed analysis of the electronic structure properties for the Au neck atoms, such as the density of states and charge densities, for some configurations before the rupture.691

Antihyperthermic treatment decreases perihematomal hypodensity

OBJECTIVE: To investigate the effect on perihematomal hypodensity and outcome of a decrease in body temperature in the first 24 hours in patients with intracerebral hemorrhage (ICH). METHODS: In this retrospective study on a prospectively registered database, among the 1,100 patients, 795 met all the inclusion criteria. Temperature variations in the first 24 hours and perihematomal hypodensity (PHHD) were recorded. Patients >/=37.5 degrees C were treated with antihyperthermic drugs for at least 48 hours. The main objective was to determine the association among temperature variation, PHHD, and outcome at 3 months. RESULTS: The decrease in temperature in the first 24 hours increased the possibility of good outcome 11-fold. Temperature decrease, lower PHHD volume, and a good outcome were observed in 31.8% of the patients who received antihyperthermic treatment. CONCLUSION: The administration of early antihyperthermic treatment in patients with spontaneous ICH with a basal axillary temperature >/=37.5 degrees C resulted in good outcome in a third of the treated patients

EVALUACIÓN DE LA CALIDAD FISIOLÓGICA DE SEMILLAS COMERCIALES DE Ormosia arborea (Vell.) Harms.

El objetivo de este trabajo fue evaluar la calidad fisiológica de semillas de Ormosia arborea (Vell.) Harms, fueron utilizadas las pruebas de germinación, tetrazolio, conductividad eléctrica y pH del exudado. Se evaluó un lote de 500 g de semillas con una humedad de 26,55%. El porcentaje de germinación obtenido fue de 28,67 y el í­ndice de velocidad de germinación fue de 3,56, considerados bajos en relación al vigor. Para las pruebas de conductividad eléctrica y pH los datos fueron analizados mediante análisis de varianza, los tratamientos fueron 6, 18 y 24 horas siendo los tiempos a los cuales las semillas fueron colocadas en agua. La prueba de conductividad eléctrica indico que el lote presentaba baja cualidad fisiológica, los datos obtenidos de pH mostraron una media de 5,83347, poco acido. Finalmente en la prueba de Tetrazolio se observó una germinación de 70%, no concordando con la prueba de germinación convencional

Identificación molecular de micobacterias no tuberculosas mediante el análisis de los patrones de restricción, Colombia 1995-2005

Introduction. Nontuberculous mycobacteria can be saprophytic, pathogenic or opportunistic. The most common diseases produced by these microorganisms are the post-surgical infections due to anesthetic procedures, infections associated with catheters, disseminated cutaneous diseases and pulmonary and central nervous system diseases that especially affect HIV patients. Identification of the nontuberculous mycobacteria can take several weeks and even then, differentiation of complex members is not possible.Objective. The PCR-restriction analysis (PRA) technique was evaluated as a method for genotypic identification of nontuberculous mycobacteria isolated of clinical samples located in the culture collection of the Instituto Nacional de Salud (National Institute of Health), Bogotá, Colombia.Materials and methods. Seventy clinical isolates of nontuberculous mycobacteria stored in 50% glycerol at -70°C were identified by phenotypic techniques. The genotypic identification was made using the PCR-restriction analysis (PRA) using the restriction enzymes BstEII and HseIII, the restriction products were visualized on gels of agarose to 3%, and the concordance between the methodologies was evaluated.Results. A matching of 100% was obtained in the identification of Mycobacterium terrae, M. szulgai, M. avium, M. chelonae and M. scrofulaceum, the matching between M. fortuitum species, M. abscessus, M. gordonae and M. intracellulare varied from 44 to 89%; there was no concurrence in the identification of species M. flavescens and M. malmoense. Conclusions. PRA provided a fast, inexpensive and accurate alternative for the identification of nontuberculous mycobacteria that permited the differentiation among species of a complex and determining the subtype of each species sample.Introducción. Las micobacterias no tuberculosas pueden ser saprofitas, patógenas u oportunistas; las enfermedades más comunes producidas por estos microorganismos son las infecciones posquirúrgicas, principalmente por procedimiento estéticos, infecciones asociadas con catéteres, enfermedades cutáneas diseminadas, enfermedades pulmonares y del sistema nervioso central que afectan especialmente a pacientes infectados con el virus de la inmunodeficiencia humana. La identificación fenotípica de las micobacterias no tuberculosas incluye pruebas microbiológicas y bioquímicas, las cuales pueden tomar varias semanas y algunas veces no logran diferenciar entre los miembros de un complejo.Objetivo. El objetivo fue evaluar la metodología de reacción en cadena de la polimerasaanálisis de restricción, como método de identificación genotípica de micobacterias no tuberculosas aisladas de muestras clínicas que pertenecen a la colección del Instituto Nacional de Salud.Materiales y métodos. Se estudiaron 70 aislamientos clínicos de micobacterias no tuberculosas, criopreservados en glicerol al 50% e identificados mediante metodologías fenotípicas. La identificación genotípica se realizó por reacción en cadena de la polimerasa-análisis de restricción y se evaluó la concordancia entre las metodologías.Resultados. Se obtuvo una concordancia del 100% en la identificación de Mycobacterium terrae, M. szulgai, M. avium, M. chelonae y M. scrofulaceum, en las especies M. fortuitum, M. abscessus M. gordonae y M. intracellulare varió de 44% a 89%; no se obtuvo concordancia en la identificación de las especies M. flavescens y M. malmoense.Conclusiones. El análisis de restricción es una alternativa para la identificación de especies de micobacterias no tuberculosas, rápida, económica y segura para la identificación, que permite la diferenciación entre especies de un complejo y la determinación del subtipo de cada especie

Autophagy and Apoptosis Have a Role in the Survival or Death of Stallion Spermatozoa during Conservation in Refrigeration

Apoptosis has been recognized as a cause of sperm death during cryopreservation and a cause of infertility in humans, however there is no data on its role in sperm death during conservation in refrigeration; autophagy has not been described to date in mature sperm. We investigated the role of apoptosis and autophagy during cooled storage of stallion spermatozoa. Samples from seven stallions were split; half of the ejaculate was processed by single layer centrifugation, while the other half was extended unprocessed, and stored at 5°C for five days. During the time of storage, sperm motility (CASA, daily) and membrane integrity (flow cytometry, daily) were evaluated. Apoptosis was evaluated on days 1, 3 and 5 (active caspase 3, increase in membrane permeability, phosphatidylserine translocation and mitochondrial membrane potential) using flow cytometry. Furthermore, LC3B processing was investigated by western blotting at the beginning and at the end of the period of storage. The decrease in sperm quality over the period of storage was to a large extent due to apoptosis; single layer centrifugation selected non-apoptotic spermatozoa, but there were no differences in sperm motility between selected and unselected sperm. A high percentage of spermatozoa showed active caspase 3 upon ejaculation, and during the period of storage there was an increase of apoptotic spermatozoa but no changes in the percentage of live sperm, revealed by the SYBR-14/PI assay, were observed. LC3B was differentially processed in sperm after single layer centrifugation compared with native sperm. In processed sperm more LC3B-II was present than in non-processed samples; furthermore, in non-processed sperm there was an increase in LC3B-II after five days of cooled storage. These results indicate that apoptosis plays a major role in the sperm death during storage in refrigeration and that autophagy plays a role in the survival of spermatozoa representing a new pro-survival mechanism in spermatozoa not previously described