Classification of Sensory Neural Signals through Deep Learning Methods

The recording and analysis of peripheral neural signals can be beneficial to provide feedback to prosthetic limbs and recover the sensory functionality in people with nerve injuries. Nevertheless, the interpretation of sensory recordings extracted from the nerve is not trivial, and only few studies have applied classifiers on sequences of neural signals without previous feature extraction. This paper evaluates the classification performance of two deep learning (DL) models (CNN and ConvLSTM) applied to the electroneurographic (ENG) activity recorded from the sciatic nerve of rats. The ENG signals, available from two public datasets, were recorded using multi-channel cuff electrodes in response to four sensory inputs (plantarflexion, dorsiflexion, nociception, and touch) elicited in response to mechanical stimulation applied to the hind paw of the rats. Different temporal lengths of the signals were considered (2.5 s, 1 s, 500 ms, 200 ms, and 100 ms), Both the two DL models proved to correctly discriminate sensory stimuli without the need of hand-engineering feature extraction. Moreover, ConvLSTM outperformed state-of-the-art results in classifying sensory ENG activity (more than 90% F1-score for sequences greater than 500 ms), and it showed promising results for real-time application scenarios

Hormone-sensitive cyclic GMP-inhibited cyclic AMP phosphodiesterase in rat adipocytes. Regulation of insulin- and cAMP-dependent activation by phosphorylation.

In 32PO4-labeled adipocytes, isoproterenol (ISO) or physiologically relevant concentrations of insulin rapidly increased phosphorylation of a particulate 135-kDa protein which has been identified as a cGMP-inhibited "low Km" cAMP phosphodiesterase (CGI-PDE) by several criteria, including selective immunoprecipitation with anti-CGI-PDE IgG (Degerman, E., Smith, C.J., Tornqvist, H., Vasta, V., Belfrage, P., and Manganiello, V.C. (1990) Proc. Natl. Acad. Sci. U.S.A. 87, 533-537). The time courses and concentration dependences for phosphorylation of CGI-PDE by ISO and insulin correlated with CGI-PDE activation in the presence of these agents; effects of ISO were somewhat more rapid than those of insulin. Adenosine deaminase, which metabolizes the adenylate cyclase inhibitor adenosine, also rapidly induced phosphorylation and activation of CGI-PDE. Phenylisopropyladenosine (an adenosine deaminase-resistant adenosine analog) prevented or reversed both adenosine deaminase-stimulated phosphorylation and activation of CGI-PDE (IC50 approximately 0.2 nM). Incubation of adipocytes with 0.1 nM insulin in the presence of ISO rapidly produced 30-200% greater activation and phosphorylation of CGI-PDE than the expected added effects of insulin and ISO individually; both effects preceded the insulin-induced decreases in protein kinase A activity and inhibition of lipolysis. These and other results indicate that CGI-PDE can be phosphorylated at distinct sites and activated by cAMP-dependent and insulin-dependent serine kinase(s), that the activation state of CGI-PDE reflects its relative phosphorylation state, and that synergistic phosphorylation/activation of CGI-PDE may be important in the antilipolytic action of insulin

Life Fertility Tables of Piophila casei L. (Diptera: Piophilidae) Reared at Five Different Temperatures

Abstract Piophila casei L. or cheese skipper is a well-known fly with a controversial role: it is considered harmful in the food industries but important in nature as a detritivore and useful for studies in forensic entomology. The temperature response of P. casei was studied at five constant temperatures: 15, 19, 25, 28, and 32°C. The lowest mortality percentage of eggs was recorded at 15°C and the highest at 32°C. Conversely, less mortality was observed for maggots at higher temperatures. The developmental time from first instar to adult decreased with temperature reaching the lowest value at 32°C (13.7 d). Adult longevity was strongly affected by temperature, decreasing from 20.5 d at 15°C to 6.6 d at 32°C. Mean total fecundity per female was higher at 25°C and lower at 15 and 19°C, whereas the best performance in mean daily total fecundity per female was recorded at 32°C. Male longevity followed a similar trend to the one observed for females. The net reproductive rate (R0) was greatest at 25°C, where..

A case of double cystic esophageal duplication in VACTERL syndrome: the first case report and a review of the literature

BackgroundAn esophageal duplication cyst (EDC) is a rare malformation resulting from the embryonic foregut. VACTERL syndrome is a genetic disorder affecting many systems of the human body. We report the first case of VACTERL syndrome associated to asymptomatic double EDC.Case reportA girl with anorectal malformation and rectovestibular fistula, kidney malformation, and various vertebral defects came to our attention at the time of birth. VACTERL disease was diagnosed. She underwent Peña anoplasty at 4 months of life without complications. MRI was conducted at the age of 2. It accidentally showed a double esophageal duplication (12 mm × 35 mm × 10 mm) at the D7–D9 level. We planned a thoracoscopy; previous intraoperative esophagogastroduodenoscopy showed an external compression of the native esophagus. Two duplicated esophageal lesions were removed. The patient made an uneventful recovery and was completely asymptomatic at long-term follow-up.ConclusionsVACTERL syndrome is still a not well-defined disease. Based on the current literature, this is the first case of a double esophageal duplication in a patient affected by VACTERL syndrome. According to us, the thoracoscopic approach of esophageal duplications can be followed by experts. Complete surgical excision is possible even if the cyst shares a common muscular wall with the esophagus. For this reason, we suggest to close the muscular wall by a simple interrupted suture

Predictors for readmission following primary total hip and total knee arthroplasty.

Background: Readmission following total joint arthroplasty has become a closely watched metric for many hospitals in the United States due to financial penalties imposed by Centers for Medicare and Medicaid Services. The purpose of this study was to identify both preoperative and postoperative reasons for readmission within 30 days following primary total hip and total knee arthroplasty (TKA). Methods: Retrospective data were collected for patients who underwent elective primary total hip arthroplasty (THA; CPT code 27130) and TKA (27447) from 2008 to 2013 at our institution. The sample was separated into readmitted and nonreadmitted cohorts. Demography, comorbidities, Charlson comorbidity index (CCI), operative parameters, readmission rates, and causes of readmission were compared between the groups using univariate and multivariate regression analysis. Results: There were 42 (3.4%) and 28 (2.2%) readmissions within 30 days for THA and TKA, respectively. The most common cause of readmission within 30 days following total joint arthroplasty was infection. Trauma was the second most common reason for readmission of a THA while wound dehiscence was the second most common cause for readmission following TKA. With univariate regression, there were multiple associated factors for readmission among THA and TKA patients, including body mass index, metabolic equivalent (MET), and CCI. Multivariate regression revealed that hospital length of stay was significantly associated with 30-day readmission after THA and TKA. Conclusion: Patient comorbidities and preoperative functional capacity significantly affect 30-day readmission rate following total joint arthroplasty. Adjustments for these parameters should be considered and we recommend the use of CCI and METs in risk adjustment models that use 30-day readmission as a marker for quality of patient care. Level of Evidence: Level III/Retrospective cohort stud

The Herschel HIFI water line survey in the low-mass proto-stellar outflow L1448

As part of the WISH (Water In Star-forming regions with Herschel) key project, we report on the observations of several ortho- and para-H2O lines performed with the HIFI instrument towards two bright shock spots (R4 and B2) along the outflow driven by the L1448 low-mass proto-stellar system, located in the Perseus cloud. These data are used to identify the physical conditions giving rise to the H2O emission and infer any dependence with velocity. These observations provide evidence that the observed water lines probe a warm (T_kin~400-600 K) and very dense (n 10^6 - 10^7 cm^-3) gas, not traced by other molecules, such as low-J CO and SiO, but rather traced by mid-IR H2 emission. In particular, H2O shows strong differences with SiO in the excitation conditions and in the line profiles in the two observed shocked positions, pointing to chemical variations across the various velocity regimes and chemical evolution in the different shock spots. Physical and kinematical differences can be seen at the two shocked positions. At the R4 position, two velocity components with different excitation can be distinguished, with the component at higher velocity (R4-HV) being less extended and less dense than the low velocity component (R4-LV). H2O column densities of about 2 10^13 and 4 10^14 cm^-2 have been derived for the R4-LV and the R4-HV components, respectively. The conditions inferred for the B2 position are similar to those of the R4-HV component, with H2O column density in the range 10^14 - 5 10^14 cm^-2, corresponding to H2O/H2 abundances in the range 0.5 - 1 10^-5. The observed line ratios and the derived physical conditions seem to be more consistent with excitation in a low velocity J-type shock with large compression rather than in a stationary C-shock, although none of these stationary models seems able to reproduce all the characteristics of the observed emission.Comment: Accepted for publication in A&

Comparison of proteomic profiles in the zebrafish retina during experimental degeneration and regeneration

Zebrafish spontaneously regenerate the retina after injury. Although the gene expression profile has been extensively studied in this species during regeneration, this does not reflect protein function. To further understand the regenerative process in the zebrafish, we compared the proteomic profile of the retina during injury and upon regeneration. Using two-dimensional difference gel electrophoresis (2D-DIGE) and label-free quantitative proteomics (quadrupole time of flight LC-MS/MS), we analysed the retina of adult longfin wildtype zebrafish at 0, 3 and 18 days after Ouabain injection. Gene ontology analysis indicates reduced metabolic processing, and increase in fibrin clot formation, with significant upregulation of fibrinogen gamma polypeptide, apolipoproteins A-Ib and A-II, galectin-1, and vitellogenin-6 during degeneration when compared to normal retina. In addition, cytoskeleton and membrane transport proteins were considerably altered during regeneration, with the highest fold upregulation observed for tubulin beta 2 A, histone H2B and brain type fatty acid binding protein. Key proteins identified in this study may play an important role in the regeneration of the zebrafish retina and investigations on the potential regulation of these proteins may lead to the design of protocols to promote endogenous regeneration of the mammalian retina following retinal degenerative disease

Effect of biotic and abiotic factors on in vitro proliferation, encystment, and excystment of Pfiesteria piscicida

Pfiesteria spp. are mixotrophic armored dinoflagellates populating the Atlantic coastal waters of the United States. They have been a focus of intense research due to their reported association with several fish mortality events. We have now used a clonal culture of Pfiesteria piscicida and several new environmental isolates to describe growth characteristics, feeding, and factors contributing to the encystment and germination of the organism in both laboratory and environmental samples. We also discuss applied methods of detection of the different morphological forms of Pfiesteria in environmental samples. In summary, Pfiesteria, when grown with its algal prey, Rhodomonas sp., presents a typical growth curve with lag, exponential, and stationary phases, followed by encystment. The doubling time in exponential phase is about 12 h. The profiles of proliferation under a standard light cycle and in the dark were similar, although the peak cell densities were markedly lower when cells were grown in the dark. The addition of urea, chicken manure, and soil extracts did not enhance Pfiesteria proliferation, but crude unfiltered spent aquarium water did. Under conditions of food deprivation or cold (4°C), Pfiesteria readily formed harvestable cysts that were further analyzed by PCR and scanning electron microscopy. The germination of Pfiesteria cysts in environmental sediment was enhanced by the presence of live fish: dinospores could be detected 13 to 15 days earlier and reached 5- to 10-times-higher peak cell densities with live fish than with artificial seawater or f/2 medium alone. The addition of ammonia, urea, nitrate, phosphate, or surprisingly, spent fish aquarium water had no effect.Facultad de Ciencias Exacta

Cyclic AMP-specific phosphodiesterase, PDE8A1, is activated by protein kinase A-mediated phosphorylation

The cyclic AMP-specific phosphodiesterase PDE8 has been shown to play a pivotal role in important processes such as steroidogenesis, T cell adhesion, regulation of heart beat and chemotaxis. However, no information exists on how the activity of this enzyme is regulated. We show that under elevated cAMP conditions, PKA acts to phosphorylate PDE8A on serine 359 and this action serves to enhance the activity of the enzyme. This is the first indication that PDE8 activity can be modulated by a kinase, and we propose that this mechanism forms a feedback loop that results in the restoration of basal cAMP levels. (C) 2012 Federation of European Biochemical Societies. Published by Elsevier B. V. All rights reserve