DIFFERENTIAL DETECTION OF TERRITORIAL AND NON-TERRITORIAL GREATER SANDHILL CRANES IN SUMMER

Abundance estimates allow wildlife managers to make informed management decisions, but differential detectability of individuals can lead to biased estimates of abundance. Our objective was to quantify detectability for non-territorial and territorial sandhill cranes (Grus canadensis tabida) during summer. We hypothesized that territorial sandhill cranes would be detected more often than non-territorial cranes. In 2009, 3 wetland areas were surveyed 2 days per week during the nesting season near Briggsville, Wisconsin. We created capture histories for color-marked territorial (n = 52) and color-marked nonterritorial cranes (n = 23) and used the Huggins closed capture model in program MARK to estimate detection probability and abundance for each group. A priori models were developed that explained daily crane detection over the sampling period using distance from road, territorial status, observation event, and time of season as variables. The best approximating model included the variables territorial status and observation event (AICc weight = 0.92). Probability of detection was higher for territorial (0.11, 95% CI = 0.08-0.14) than for non-territorial ( 0.03, 95% CI = 0.01-0.07) sandhill cranes. In subsequent observation events, detection probability almost doubled to 0.18 (95% CI = 0.17-0.20) for territorial cranes, and almost tripled to 0.11 (95% CI = 0.09-0.14) for non-territorial cranes. Potential reasons for differential detection during subsequent observations include differing degrees of movement by birds and/or an observer effect in which the ability to observe birds or the perception by technicians of birds increased over time

To What Extent Does Text Simplification Entail a More Optimized Comprehension in Human-Oriented CNLs?

International audienceThe main goal of the current study is to develop a new cockpit controlled language for future Airbus aircraft by using psycholinguistic testing to optimize pilot comprehension. Pilots are aided by cockpit messages in order to deal with different situations during aircraft operations. The current controlled languages used on the Airbus aircraft have been carefully constructed to avoid ambiguity, inaccuracy, inconsistency, and inadequacy (Spaggiari, Beaujard, Cannesson (2003)) in order to ensure the safety of the navigation, operational needs, and the adaptability of the human-computer interaction to different situations in the cockpit. However, this controlled language has several limitations, mostly due to small screen sizes (limited number of words and sentences) and is highly codified (non-conforming to natural language syntax, color-coded and so on) so that it requires prior pilot training in order to achieve fluency. As future cockpit design is under construction, we might be looking at a different flexibility margin. Our experimentation plan is to go against the tide of common CNL (Controlled Natural Language) construction, in the sense that we will not be taking natural language and simplifying it, but rather taking a highly controlled codified language (therefore theoretically most simple) and " complexifying " it (bring it closer to natural language: theoretically most complex) in order to make it more accessible, and limit prior training needs

Theory of superconductivity of carbon nanotubes and graphene

We present a new mechanism of carbon nanotube superconductivity that originates from edge states which are specific to graphene. Using on-site and boundary deformation potentials which do not cause bulk superconductivity, we obtain an appreciable transition temperature for the edge state. As a consequence, a metallic zigzag carbon nanotube having open boundaries can be regarded as a natural superconductor/normal metal/superconductor junction system, in which superconducting states are developed locally at both ends of the nanotube and a normal metal exists in the middle. In this case, a signal of the edge state superconductivity appears as the Josephson current which is sensitive to the length of a nanotube and the position of the Fermi energy. Such a dependence distinguishs edge state superconductivity from bulk superconductivity.Comment: 5 pages, 2 figure

Risk Factors for Urinary Complications After Renal Transplantation

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/73788/1/j.1600-6143.2007.01790.x.pd

Autophagosome-based strategy to monitor apparent tumor-specific CD8 T cells in patients with prostate cancer

The immune system plays an essential role in eradicating cancer in concert with various treatment modalities. In the absence of autologous tumor material, no standardized method exists to assess T cell responses against the many antigens that may serve as cancer rejection antigens. Thus, development of methods to screen for therapy-induced anti-tumor responses is a high priority that could help tailor therapy. Here we tested whether a tumor-derived antigen source called DRibbles®, which contain a pool of defective ribosomal products (DRiPs), long-lived and short-lived proteins (SLiPs) and danger-associated molecular patterns (DAMPs), can be used to identify tumor-associated antigen (TAA)-specific responses in patients before or after immunotherapy treatment. Protein content, gene expression and non-synonymous – single nucleotide variants (ns-SNVs) present in UbiLT3 DRibbles were compared with prostate adenocarcinomas and the prostate GVAX vaccine cell lines (PC3/LNCaP). UbiLT3 DRibbles were found to share proteins, as well as match tumor sequences for ns-SNVs with prostate adenocarcinomas and with the cell lines PC3 and LNCaP. UbiLT3 DRibbles were used to monitor anti-tumor responses in patients vaccinated with allogeneic prostate GVAX. UbiLT3-DRibble-reactive CD8+ T-cell responses were detected in post-vaccine PBMC of 6/12 patients (range 0.85–22% of CD8+ cells) after 1 week in vitro stimulation (p = 0.007 vs. pre-vaccine). In conclusion, a cancer-derived autophagosome-enriched preparation, packaging over 100 proteins over-expressed in prostate cancer into microvesicles containing DAMPs, could be used to identify CD8+ T cells in peripheral blood from patients after prostate GVAX vaccination and may represent a general method to monitor anti-cancer T cell responses following immunotherapy

The role of the chemokine receptor CXCR4 in infection with feline immunodeficiency virus

Infection with feline immunodeficiency virus (FIV) leads to the development of a disease state similar to AIDS in man. Recent studies have identified the chemokine receptor CXCR4 as the major receptor for cell culture-adapted strains of FIV, suggesting that FIV and human immunodeficiency virus (HIV) share a common mechanism of infection involving an interaction between the virus and a member of the seven transmembrane domain superfamily of molecules. This article reviews the evidence for the involvement of chemokine receptors in FIV infection and contrasts these findings with similar studies on the primate lentiviruses HIV and SIV (simian immunodeficiency virus)

Studying the local character of Raman features of single-walled carbon nanotubes along a bundle using TERS

Here, we show that the Raman intensity of the G-mode in tip-enhanced Raman spectroscopy (TERS) is strongly dependent on the height of the bundle. Moreover, using TERS we are able to position different single-walled carbon nanotubes along a bundle, by correlating the observed radial breathing mode (RBM) with the AFM topography at the measuring point. The frequency of the G- mode behaves differently in TERS as compared to far-field Raman. Using the RBM frequency, the diameters of the tubes were calculated and a very good agreement with the G--mode frequency was observed

Amine functionalization of cholecyst-derived extracellular matrix with generation 1 PAMAM dendrimer

This document is the unedited author's version of a Submitted Work that was subsequently accepted for publication in Biomacromolecules, copyright © American Chemical Society after peer review. To access the final edited and published work, see http://pubs.acs.org/doi/pdf/10.1021/bm701055k.A method to functionalize cholecyst-derived extracellular matrix (CEM) with free amine groups was established in an attempt to improve its potential for tethering of bioactive molecules. CEM was incorporated with Generation-1 polyamidoamine (G1 PAMAM) dendrimer by using N-(3-dimethylaminopropyl)-N′-ethylcarbodiimide and N-hydroxysuccinimide cross-linking system. The nature of incorporation of PAMAM dendrimer was evaluated using shrink temperature measurements, Fourier transform infrared (FTIR) assessment, ninhydrin assay, and swellability. The effects of PAMAM incorporation on mechanical and degradation properties of CEM were evaluated using a uniaxial mechanical test and collagenase degradation assay, respectively. Ninhydrin assay and FTIR assessment confirmed the presence of increasing free amine groups with increasing quantity of PAMAM in dendrimer-incorporated CEM (DENCEM) scaffolds. The amount of dendrimer used was found to be critical in controlling scaffold degradation, shrink temperature, and free amine content. Cell culture studies showed that fibroblasts seeded on DENCEM maintained their metabolic activity and ability to proliferate in vitro. In addition, fluorescence cell staining and scanning electron microscopy analysis of cell-seeded DENCEM showed preservation of normal fibroblast morphology and phenotype

Stented ureterovesical anastomosis in renal transplantation: does it influence the rate of urinary tract infections?

<p>Abstract</p> <p>Objective</p> <p>Our objective was to evaluate the impact of routine use of double-J stents on the incidence of urinary tract infection after renal transplantation.</p> <p>Methods</p> <p>We conducted a retrospective-comparative single-centre study in 310 consecutive adult deceased donor kidney recipients transplanted from 2002 to 2006. Patients were divided in two groups, with or without urinary stent implantation. To evaluate the predictive factors for UTI, donor and recipients pre- and post-transplantation data were analysed. Early urological complications and renal function within 12 months of transplantation were included as well.</p> <p>Results</p> <p>A total of 157 patients were enrolled to a stent (ST) and 153 patients to a no-stent (NST) group. The rate of urinary tract infection at three months was similar between the two groups (43.3% ST vs. 40.1% NST, p = 0.65). Of the identified pathogens Enterococcus and Escherichia coli were the most common species. In multivariate analysis neither age nor immunosuppressive agents, BMI or diabetes seemed to have influence on the rate of UTI. When compared to males, females had a significantly higher risk for UTI (54.0% vs. 33.5%).</p> <p>Conclusion</p> <p>Prophylactic stenting of the ureterovesical anastomosis does not increase the risk of urinary tract infection in the early postoperative period.</p

Prediction of peptide and protein propensity for amyloid formation

Understanding which peptides and proteins have the potential to undergo amyloid formation and what driving forces are responsible for amyloid-like fiber formation and stabilization remains limited. This is mainly because proteins that can undergo structural changes, which lead to amyloid formation, are quite diverse and share no obvious sequence or structural homology, despite the structural similarity found in the fibrils. To address these issues, a novel approach based on recursive feature selection and feed-forward neural networks was undertaken to identify key features highly correlated with the self-assembly problem. This approach allowed the identification of seven physicochemical and biochemical properties of the amino acids highly associated with the self-assembly of peptides and proteins into amyloid-like fibrils (normalized frequency of β-sheet, normalized frequency of β-sheet from LG, weights for β-sheet at the window position of 1, isoelectric point, atom-based hydrophobic moment, helix termination parameter at position j+1 and ΔGº values for peptides extrapolated in 0 M urea). Moreover, these features enabled the development of a new predictor (available at http://cran.r-project.org/web/packages/appnn/index.html) capable of accurately and reliably predicting the amyloidogenic propensity from the polypeptide sequence alone with a prediction accuracy of 84.9 % against an external validation dataset of sequences with experimental in vitro, evidence of amyloid formation