62 research outputs found

    Accumulation of metals in GOLD4 COPD lungs is associated with decreased CFTR levels

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    Abstract Background The Cystic Fibrosis Transmembrane conductance Regulator (CFTR) is a chloride channel that primarily resides in airway epithelial cells. Decreased CFTR expression and/or function lead to impaired airway surface liquid (ASL) volume homeostasis, resulting in accumulation of mucus, reduced clearance of bacteria, and chronic infection and inflammation. Methods Expression of CFTR and the cigarette smoke metal content were assessed in lung samples of controls and COPD patients with established GOLD stage 4. CFTR protein and mRNA were quantified by immunohistochemistry and quantitative RT-PCR, respectively. Metals present in lung samples were quantified by ICP-AES. The effect of cigarette smoke on down-regulation of CFTR expression and function was assessed using primary human airway epithelial cells. The role of leading metal(s) found in lung samples of GOLD 4 COPD patients involved in the alteration of CFTR was confirmed by exposing human bronchial epithelial cells 16HBE14o- to metal-depleted cigarette smoke extracts. Results We found that CFTR expression is reduced in the lungs of GOLD 4 COPD patients, especially in bronchial epithelial cells. Assessment of metals present in lung samples revealed that cadmium and manganese were significantly higher in GOLD 4 COPD patients when compared to control smokers (GOLD 0). Primary human airway epithelial cells exposed to cigarette smoke resulted in decreased expression of CFTR protein and reduced airway surface liquid height. 16HBE14o-cells exposed to cigarette smoke also exhibited reduced levels of CFTR protein and mRNA. Removal and/or addition of metals to cigarette smoke extracts before exposure established their role in decrease of CFTR in airway epithelial cells. Conclusions CFTR expression is reduced in the lungs of patients with severe COPD. This effect is associated with the accumulation of cadmium and manganese suggesting a role for these metals in the pathogenesis of COPD

    Genome-wide association and Mendelian randomisation analysis provide insights into the pathogenesis of heart failure

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    Heart failure (HF) is a leading cause of morbidity and mortality worldwide. A small proportion of HF cases are attributable to monogenic cardiomyopathies and existing genome-wide association studies (GWAS) have yielded only limited insights, leaving the observed heritability of HF largely unexplained. We report results from a GWAS meta-analysis of HF comprising 47,309 cases and 930,014 controls. Twelve independent variants at 11 genomic loci are associated with HF, all of which demonstrate one or more associations with coronary artery disease (CAD), atrial fibrillation, or reduced left ventricular function, suggesting shared genetic aetiology. Functional analysis of non-CAD-associated loci implicate genes involved in cardiac development (MYOZ1, SYNPO2L), protein homoeostasis (BAG3), and cellular senescence (CDKN1A). Mendelian randomisation analysis supports causal roles for several HF risk factors, and demonstrates CAD-independent effects for atrial fibrillation, body mass index, and hypertension. These findings extend our knowledge of the pathways underlying HF and may inform new therapeutic strategies

    Genome-wide association and Mendelian randomisation analysis provide insights into the pathogenesis of heart failure

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    Abstract: Heart failure (HF) is a leading cause of morbidity and mortality worldwide. A small proportion of HF cases are attributable to monogenic cardiomyopathies and existing genome-wide association studies (GWAS) have yielded only limited insights, leaving the observed heritability of HF largely unexplained. We report results from a GWAS meta-analysis of HF comprising 47,309 cases and 930,014 controls. Twelve independent variants at 11 genomic loci are associated with HF, all of which demonstrate one or more associations with coronary artery disease (CAD), atrial fibrillation, or reduced left ventricular function, suggesting shared genetic aetiology. Functional analysis of non-CAD-associated loci implicate genes involved in cardiac development (MYOZ1, SYNPO2L), protein homoeostasis (BAG3), and cellular senescence (CDKN1A). Mendelian randomisation analysis supports causal roles for several HF risk factors, and demonstrates CAD-independent effects for atrial fibrillation, body mass index, and hypertension. These findings extend our knowledge of the pathways underlying HF and may inform new therapeutic strategies

    Change point inference in high-dimensional regression models under temporal dependence

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    This paper concerns about the limiting distributions of change point estimators, in a high- dimensional linear regression time series context, where a regression object (yt, Xt) ∈ R × Rp is observed at every time point t ∈ {1, . . . , n}. At unknown time points, called change points, the regression coefficients change, with the jump sizes measured in l2-norm. We provide limiting distributions of the change point estimators in the regimes where the minimal jump size vanishes and where it remains a constant. We allow for both the covariate and noise sequences to be temporally dependent, in the functional dependence framework, which is the first time seen in the change point inference literature. We show that a block-type long-run variance estimator is consistent under the functional dependence, which facilitates the practical implementation of our derived limiting distributions. We also present a few important byproducts of our analysis, which are of their own interest. These include a novel variant of the dynamic programming algorithm to boost the computational efficiency, consistent change point localisation rates under temporal dependence and a new Bernstein inequality for data possessing functional dependence. Extensive numerical results are provided to support our theoretical results. The proposed methods are implemented in the R package changepoints (Xu et al., 2021)

    Estimation and Inference for Change Points in Functional Regression Time Series

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    In this paper, we study the estimation and inference of change points under a functional linear regression model with changes in the slope function. We present a novel Functional Regression Binary Segmentation (FRBS) algorithm which is computationally efficient as well as achieving consistency in multiple change point detection. This algorithm utilizes the predictive power of piece-wise constant functional linear regression models in the reproducing kernel Hilbert space framework. We further propose a refinement step that improves the localization rate of the initial estimator output by FRBS, and derive asymptotic distributions of the refined estimators for two different regimes determined by the magnitude of a change. To facilitate the construction of confidence intervals for underlying change points based on the limiting distribution, we propose a consistent block-type long-run variance estimator. Our theoretical justifications for the proposed approach accommodate temporal dependence and heavy-tailedness in both the functional covariates and the measurement errors. Empirical effectiveness of our methodology is demonstrated through extensive simulation studies and an application to the Standard and Poor's 500 index dataset

    Magnetic field deformation due to electron drift in a Hall thruster

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    The strength and shape of the magnetic field are the core factors in the design of the Hall thruster. However, Hall current can affect the distribution of static magnetic field. In this paper, the Particle-In-Cell (PIC) method is used to obtain the distribution of Hall current in the discharge channel. The Hall current is separated into a direct and an alternating part to calculate the induced magnetic field using Finite Element Method Magnetics (FEMM). The results show that the direct Hall current decreases the magnetic field strength in the acceleration region and also changes the shape of the magnetic field. The maximum reduction in radial magnetic field strength in the exit plane is 10.8 G for an anode flow rate of 15 mg/s and the maximum angle change of the magnetic field line is close to 3° in the acceleration region. The alternating Hall current induces an oscillating magnetic field in the whole discharge channel. The actual magnetic deformation is shown to contain these two parts

    Droplet-Confined Electroless Deposition of Silver Nanoparticles on Ordered Superhydrophobic Structures for High Uniform SERS Measurements

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    Surface-enhanced Raman scattering spectroscopy (SERS) is a nondestructive testing technique. To increase reproducibility of the SERS measurement is the key issue for improving the performance of SERS. In this article, we demonstrate an efficient method to improve the reproducibility, using confined silver nanoparticles (AgNPs) as a substrate. The AgNPs are formed uniformly on the tops of the prepared nanopillars by droplet-confined electroless deposition on the hydrophobic Si nanopillar arrays. The AgNPs present an excellent reproducibility in Raman measurement; the relative standard deviation is down to 3.40%. There exists a great linear correlation between the concentration of Rhodamine 6G (R6G) and the Raman intensity in the log–log plot; <i>R</i><sup>2</sup> is 0.998, indicating that this SERS substrate can be applied for the quantitative SERS analysis. Meanwhile, the minimum detection concentration is down to 10<sup>–11</sup> M on the hydrophobic substrate, with R6G as a probe molecule
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