588 research outputs found
Anaerobic consumers of monosaccharides in a moderately acidic fen
16S rRNA-based stable isotope probing identified active xylose- and glucose-fermenting Bacteria and active Archaea, including methanogens, in anoxic slurries of material obtained from a moderately acidic, CH4-emitting fen. Xylose and glucose were converted to fatty acids, CO2, H2, and CH4 under moderately acidic, anoxic conditions, indicating that the fen harbors moderately acid-tolerant xylose- and glucose-using fermenters, as well as moderately acid-tolerant methanogens. Organisms of the families Acidaminococcaceae, Aeromonadaceae, Clostridiaceae, Enterobacteriaceae, and Pseudomonadaceae and the order Actinomycetales, including hitherto unknown organisms, utilized xylose- or glucose-derived carbon, suggesting that highly diverse facultative aerobes and obligate anaerobes contribute to the flow of carbon in the fen under anoxic conditions. Uncultured Euryarchaeota (i.e., Methanosarcinaceae and Methanobacteriaceae) and Crenarchaeota species were identified by 16S rRNA analysis of anoxic slurries, demonstrating that the acidic fen harbors novel methanogens and Crenarchaeota organisms capable of anaerobiosis. Fermentation-derived molecules are conceived to be the primary drivers of methanogenesis when electron acceptors other than CO2 are absent, and the collective findings of this study indicate that fen soils harbor diverse, acid-tolerant, and novel xylose-utilizing as well as glucose-utilizing facultative aerobes and obligate anaerobes that form trophic links to novel moderately acid-tolerant methanogen
Diversity and impact of rare variants in genes encoding the platelet G protein-coupled receptors
Platelet responses to activating agonists are influenced by common
population variants within or near G protein-coupled receptor (GPCR)
genes that affect receptor activity. However, the impact of rare GPCR
gene variants is unknown. We describe the rare single nucleotide variants
(SNVs) in the coding and splice regions of 18 GPCR genes in
7,595 exomes from the 1,000-genomes and Exome Sequencing
Project databases and in 31 cases with inherited platelet function disorders
(IPFDs). In the population databases, the GPCR gene target
regions contained 740 SNVs (318 synonymous, 410 missense, 7 stop
gain and 6 splice region) of which 70 % had global minor allele frequency
(MAF) < 0.05 %. Functional annotation using six computational
algorithms, experimental evidence and structural data identified
156/740 (21 %) SNVs as potentially damaging to GPCR function, most
commonly in regions encoding the transmembrane and C-terminal intracellular
receptor domains. In 31 index cases with IPFDs (Gi-pathway
defect n=15; secretion defect n=11; thromboxane pathway defect
n=3 and complex defect n=2) there were 256 SNVs in the target
regions of 15 stimulatory platelet GPCRs (34 unique; 12 with
MAF< 1 % and 22 with MAF≥ 1 %). These included rare variants predicting
R122H, P258T and V207A substitutions in the P2Y12 receptor
that were annotated as potentially damaging, but only partially explained
the platelet function defects in each case. Our data highlight
that potentially damaging variants in platelet GPCR genes have low
individual frequencies, but are collectively abundant in the population.
Potentially damaging variants are also present in pedigrees with IPFDs
and may contribute to complex laboratory phenotypes
Illness Beliefs Predict Mortality in Patients with Diabetic Foot Ulcers
Background - Patients’ illness beliefs have been associated with glycaemic control in diabetes and survival in other conditions.
Objective - We examined whether illness beliefs independently predicted survival in patients with diabetes and foot ulceration.
Methods - Patients (n = 169) were recruited between 2002 and 2007. Data on illness beliefs were collected at baseline. Data on survival were extracted on 1st November 2011. Number of days survived reflected the number of days from date of recruitment to 1st November 2011.
Results - Cox regressions examined the predictors of time to death and identified ischemia and identity beliefs (beliefs regarding symptoms associated with foot ulceration) as significant predictors of time to death.
Conclusions - Our data indicate that illness beliefs have a significant independent effect on survival in patients with diabetes and foot ulceration. These findings suggest that illness beliefs could improve our understanding of mortality risk in this patient group and could also be the basis for future therapeutic interventions to improve survival
Trouble in Paradise - A disabled person's right to the satisfaction of a self-defined need:Some conceptual and practical problems
This paper questions the usefulness of the rights-based approach to ameliorating the social situation of disabled people in Britain and advances two criticisms. First, that rights and self-de? ned needs have been under-theorised by disability theorists to the extent that they have insuf? ciently appreciated the problems that these approaches pose. The paper suggests that rights to appropriate resources to satisfy self-de? ned needs will generate vast numbers of competing rights claims and that the resulting tendency of rights to con? ict has been under-appreciated. Secondly, that there has been little consideration of how these con? icts might be reconciled. The ? rst two sections of the paper look at the concepts of ascribed and self-de? ned needs, respectively, whilst the ? nal one looks at some of the problems of the rights approach and some of the dif? culties of making self-de? ned need the basis of rights claims
Recent Advances in Understanding Particle Acceleration Processes in Solar Flares
We review basic theoretical concepts in particle acceleration, with
particular emphasis on processes likely to occur in regions of magnetic
reconnection. Several new developments are discussed, including detailed
studies of reconnection in three-dimensional magnetic field configurations
(e.g., current sheets, collapsing traps, separatrix regions) and stochastic
acceleration in a turbulent environment. Fluid, test-particle, and
particle-in-cell approaches are used and results compared. While these studies
show considerable promise in accounting for the various observational
manifestations of solar flares, they are limited by a number of factors, mostly
relating to available computational power. Not the least of these issues is the
need to explicitly incorporate the electrodynamic feedback of the accelerated
particles themselves on the environment in which they are accelerated. A brief
prognosis for future advancement is offered.Comment: This is a chapter in a monograph on the physics of solar flares,
inspired by RHESSI observations. The individual articles are to appear in
Space Science Reviews (2011
The Factory and the Beehive. IV. A Comprehensive Study of the Rotation X-Ray Activity Relation in Praesepe and the Hyades
X-ray observations of low-mass stars in open clusters are critical to understanding the dependence of magnetic activity on stellar properties and their evolution. Praesepe and the Hyades, two of the nearest, most-studied open clusters, are among the best available laboratories for examining the dependence of magnetic activity on rotation for stars with masses 21 M . We present an updated study of the rotation-X-ray activity relation in the two clusters. We updated membership catalogs that combine pre-Gaia catalogs with new catalogs based on Gaia Data Release 2. The resulting catalogs are the most inclusive ones for both clusters: 1739 Praesepe and 1315 Hyades stars. We collected X-ray detections for cluster members, for which we analyzed, re-analyzed, or collated data from ROSAT, the Chandra X-ray Observatory, the Neil Gehrels Swift Observatory, and XMM-Newton. We have detections for 326 Praesepe and 462 Hyades members, of which 273 and 164, respectively, have rotation periods - an increase of 6× relative to what was previously available. We find that at ≈700 Myr, only M dwarfs remain saturated in X-rays, with only tentative evidence for supersaturation. We also find a tight relation between the Rossby number and fractional X-ray luminosity L X/L bol in unsaturated single members, suggesting a power-law index between -3.2 and -3.9. Lastly, we find no difference in the coronal parameters between binary and single members. These results provide essential insight into the relative efficiency of magnetic heating of the stars' atmospheres, thereby informing the development of robust age-rotation-activity relations
Magnetoluminescence
Pulsar Wind Nebulae, Blazars, Gamma Ray Bursts and Magnetars all contain
regions where the electromagnetic energy density greatly exceeds the plasma
energy density. These sources exhibit dramatic flaring activity where the
electromagnetic energy distributed over large volumes, appears to be converted
efficiently into high energy particles and gamma-rays. We call this general
process magnetoluminescence. Global requirements on the underlying, extreme
particle acceleration processes are described and the likely importance of
relativistic beaming in enhancing the observed radiation from a flare is
emphasized. Recent research on fluid descriptions of unstable electromagnetic
configurations are summarized and progress on the associated kinetic
simulations that are needed to account for the acceleration and radiation is
discussed. Future observational, simulation and experimental opportunities are
briefly summarized.Comment: To appear in "Jets and Winds in Pulsar Wind Nebulae, Gamma-ray Bursts
and Blazars: Physics of Extreme Energy Release" of the Space Science Reviews
serie
Theory and Applications of Non-Relativistic and Relativistic Turbulent Reconnection
Realistic astrophysical environments are turbulent due to the extremely high
Reynolds numbers. Therefore, the theories of reconnection intended for
describing astrophysical reconnection should not ignore the effects of
turbulence on magnetic reconnection. Turbulence is known to change the nature
of many physical processes dramatically and in this review we claim that
magnetic reconnection is not an exception. We stress that not only
astrophysical turbulence is ubiquitous, but also magnetic reconnection itself
induces turbulence. Thus turbulence must be accounted for in any realistic
astrophysical reconnection setup. We argue that due to the similarities of MHD
turbulence in relativistic and non-relativistic cases the theory of magnetic
reconnection developed for the non-relativistic case can be extended to the
relativistic case and we provide numerical simulations that support this
conjecture. We also provide quantitative comparisons of the theoretical
predictions and results of numerical experiments, including the situations when
turbulent reconnection is self-driven, i.e. the turbulence in the system is
generated by the reconnection process itself. We show how turbulent
reconnection entails the violation of magnetic flux freezing, the conclusion
that has really far reaching consequences for many realistically turbulent
astrophysical environments. In addition, we consider observational testing of
turbulent reconnection as well as numerous implications of the theory. The
former includes the Sun and solar wind reconnection, while the latter include
the process of reconnection diffusion induced by turbulent reconnection, the
acceleration of energetic particles, bursts of turbulent reconnection related
to black hole sources as well as gamma ray bursts. Finally, we explain why
turbulent reconnection cannot be explained by turbulent resistivity or derived
through the mean field approach.Comment: 66 pages, 24 figures, a chapter of the book "Magnetic Reconnection -
Concepts and Applications", editors W. Gonzalez, E. N. Parke
Sand bodies at the shelf edge in the Gulf of Lions (Western Mediterranean): Deglacial history and modern processes
A Helicity-Based Method to Infer the CME Magnetic Field Magnitude in Sun and Geospace: Generalization and Extension to Sun-Like and M-Dwarf Stars and Implications for Exoplanet Habitability
Patsourakos et al. (Astrophys. J. 817, 14, 2016) and Patsourakos and
Georgoulis (Astron. Astrophys. 595, A121, 2016) introduced a method to infer
the axial magnetic field in flux-rope coronal mass ejections (CMEs) in the
solar corona and farther away in the interplanetary medium. The method, based
on the conservation principle of magnetic helicity, uses the relative magnetic
helicity of the solar source region as input estimates, along with the radius
and length of the corresponding CME flux rope. The method was initially applied
to cylindrical force-free flux ropes, with encouraging results. We hereby
extend our framework along two distinct lines. First, we generalize our
formalism to several possible flux-rope configurations (linear and nonlinear
force-free, non-force-free, spheromak, and torus) to investigate the dependence
of the resulting CME axial magnetic field on input parameters and the employed
flux-rope configuration. Second, we generalize our framework to both Sun-like
and active M-dwarf stars hosting superflares. In a qualitative sense, we find
that Earth may not experience severe atmosphere-eroding magnetospheric
compression even for eruptive solar superflares with energies ~ 10^4 times
higher than those of the largest Geostationary Operational Environmental
Satellite (GOES) X-class flares currently observed. In addition, the two
recently discovered exoplanets with the highest Earth-similarity index, Kepler
438b and Proxima b, seem to lie in the prohibitive zone of atmospheric erosion
due to interplanetary CMEs (ICMEs), except when they possess planetary magnetic
fields that are much higher than that of Earth.Comment: http://adsabs.harvard.edu/abs/2017SoPh..292...89
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