7 research outputs found

    Population differentiation and historical demography of the threatened snowy plover Charadrius nivosus (Cassin, 1858)

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    Delineating conservation units is a complex and often controversial process that is particularly challenging for highly vagile species. Here, we reassess population genetic structure and identify those populations of highest conservation value in the threatened snowy plover (Charadrius nivosus, Cassin, 1858), a partial migrant shorebird endemic to the Americas. We use four categories of genetic data—mitochondrial DNA (mtDNA), microsatellites, Z-linked and autosomal single nucleotide polymorphisms (SNPs)—to: (1) assess subspecies delineation and examine population structure (2) compare the sensitivity of the different types of genetic data to detect spatial genetic patterns, and (3) reconstruct demographic history of the populations analysed. Delineation of two traditionally recognised subspecies was broadly supported by all data. In addition, microsatellite and SNPs but not mtDNA supported the recognition of Caribbean snowy plovers (C. n. tenuirostris) and Floridian populations (eastern C. n. nivosus) as distinct genetic lineage and deme, respectively. Low migration rates estimated from autosomal SNPs (m < 0.03) reflect a general paucity of exchange between genetic lineages. In contrast, we detected strong unidirectional migration (m = 0.26) from the western into the eastern nivosus deme. Within western nivosus, we found no genetic differentiation between coastal Pacific and inland populations. The correlation between geographic and genetic distances was weak but significant for all genetic data sets. All demes showed signatures of bottlenecks occurring during the past 1000 years. We conclude that at least four snowy plover conservation units are warranted: in addition to subspecies nivosus and occidentalis, a third unit comprises the Caribbean tenuirostris lineage and a fourth unit the distinct eastern nivosus deme

    Standards of conduct and reporting in evidence syntheses that could inform environmental policy and management decisions

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    Accurate, unbiased and concise synthesis of available evidence following clear methodology and transparent report‑ ing is necessary to support effective environmental policy and management decisions. Without this, less reliable and/ or less objective reviews of evidence could inform decision making, leading to ineffective, resource wasteful inter‑ ventions with potential for unintended consequences. We evaluated the reliability of over 1000 evidence syntheses (reviews and overviews) published between 2018 and 2020 that provide evidence on the impacts of human activities or effectiveness of interventions relevant to environmental management. The syntheses are drawn from the Col‑ laboration for Environmental Evidence Database of Evidence Reviews (CEEDER), an online, freely available evidence service for evidence users that assesses the reliability of evidence syntheses using a series of published criteria. We found that the majority of syntheses have problems with transparency, replicability and potential for bias. Overall, our results suggest that most recently published evidence syntheses are of low reliability to inform decision making. Reviews that followed guidance and reporting standards for evidence synthesis had improved assessment ratings, but there remains substantial variation in the standard of reviews amongst even these. Furthermore, the term ‘system‑ atic review’, which implies conformity with a methodological standard, was frequently misused. A major objective of the CEEDER project is to improve the reliability of the global body of environmental evidence reviews. To this end we outline freely available online resources to help improve review conduct and reporting. We call on authors, editors and peer reviewers to use these resources to ensure more reliable syntheses in the future

    Successful breeding predicts divorce in plovers

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    When individuals breed more than once, parents are faced with the choice of whether to re-mate with their old partner or divorce and select a new mate. Evolutionary theory predicts that, following successful reproduction with a given partner, that partner should be retained for future reproduction. However, recent work in a polygamous bird, has instead indicated that successful parents divorced more often than failed breeders (Halimubieke et al. in Ecol Evol 9:10734–10745, 2019), because one parent can benefit by mating with a new partner and reproducing shortly after divorce. Here we investigate whether successful breeding predicts divorce using data from 14 well-monitored populations of plovers (Charadrius spp.). We show that successful nesting leads to divorce, whereas nest failure leads to retention of the mate for follow-up breeding. Plovers that divorced their partners and simultaneously deserted their broods produced more offspring within a season than parents that retained their mate. Our work provides a counterpoint to theoretical expectations that divorce is triggered by low reproductive success, and supports adaptive explanations of divorce as a strategy to improve individual reproductive success. In addition, we show that temperature may modulate these costs and benefits, and contribute to dynamic variation in patterns of divorce across plover breeding systems

    Ecology, conservation, and phylogenetic position of the Madagascar Jacana Actophilornis albinucha

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    The Madagascar Jacana Actophilornis albinucha (Jacanidae) is an endemic shorebird found in the threatened wetlands of western Madagascar. This species is presumed to exhibit classical polyandry; however, few data are available to support that assumption. More generally, a lack of basic understanding of this species hinders conservation efforts. We conducted the most extensive study of the Madagascar Jacana to date, and report on its: 1) distribution, population size and density; 2) degree of sexual size dimorphism; and 3) phylogenetic position. The surveys were conducted at 54 lakes, between January and October in 2016. Madagascar Jacana were found at 22 lakes, and within these were distributed at a mean density of 3.5 ± 0.74 [SE] individuals per hectare of surveyed habitat. We estimate the global population size to be between 975 and 2 064 individuals, and habitat destruction appears to be the main threat to the species. Females were significantly larger than males, consistent with reports for other Jacanidae species. Using a mitochondrial DNA fragment, we expanded the Jacanidae genetic phylogeny, and confirmed that Madagascar Jacana is the sister species to the African Jacana Actophilornis africanus. Further studies are urgently needed to thoroughly re-assess the threat status and population trend of the Madagascar Jacana.Ecologie et conservation du Jacana malgache Actophilornis albinuchaLe Jacana Malgache Actophilornis albinucha (famille Jacanidae) est un oiseau de rivage endĂ©mique trouvĂ© dans les zones humides menacĂ©es de l’ouest de Madagascar. Cette espĂšce est prĂ©sumĂ©e une polyandrie classique, cependant, peu de donnĂ©es sont disponibles pour soutenir ces hypothĂšses. Plus gĂ©nĂ©ralement, un manque de comprĂ©hension de base de cette espĂšce entrave les efforts de conservation. À ce jour, nous avons menĂ© une Ă©tude plus extensive sur le Jacana Malgache pour mettre Ă  jour et rapporter sa: 1) rĂ©partition, taille de la population et sa densitĂ©; 2) le degrĂ© de dimorphisme sexuel; et 3) la position phylogĂ©nĂ©tique. Des recensements ont Ă©tĂ© menĂ©s dans 54 lacs entre janvier et octobre 2016. Le Jacana Malgache a Ă©tĂ© trouvĂ© dans 22 lacs auxquels il Ă©tait rĂ©parti Ă  une densitĂ© de 3.5 ± 0.74 [SE] par hectare de l’habitat inventoriĂ©. Nous avons estimĂ© la taille de la population globale entre 975 et 2 064 individus et la destruction de l’habitat semble ĂȘtre la principale menace pour cette espĂšce. Les femelles Ă©taient significativement plus grandes que les mĂąles, cette observation concorde avec les dĂ©clarations d’autres espĂšces de Jacana. À l’aide d’un fragment d’ADN mitochondrial, nous avons Ă©largi la phylogĂ©nie gĂ©nĂ©tique des Jacanidae et confirmĂ© que le Jacana Malgache est l’espĂšce sƓur du Jacana Africain Actophilornis africanus. D’autres Ă©tudes sont nĂ©cessaires d’urgence pour rĂ©Ă©valuer en profondeur l’état de la menace et les tendances de la population du Jacana malgache.Keywords: African wetlands, Jacanidae, mtDNA, phylogeny, population density, sexual size dimorphism, shorebirds, visual surve

    Integration of close‐range underwater photogrammetry with inspection and mesh processing software: a novel approach for quantifying ecological dynamics of temperate biogenic reefs

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    Characterizing and monitoring changes in biogenic 3‐dimensional (3D) structures at multiple scales over time is challenging within the practical constraints of conventional ecological tools. Therefore, we developed a structure‐from‐motion (SfM)‐based photogrammetry method, coupled with inspection and mesh processing software, to estimate important ecological parameters of underwater worm colonies (hummocks) constructed by the sabellariid polychaete Sabellaria alveolata, using non‐destructive, 3D modeling and mesh analysis. High resolution digital images of bioconstructions (hummocks) were taken in situ under natural conditions to generate digital 3D models over different sampling periods to analyse the morphological evolution of four targeted hummocks. 3D models were analysed in GOM Inspect software, a powerful and freely available mesh processing software to follow growth as well as morphology changes over time of each hummock. Linear regressions showed 3D models only slightly overestimated the real dimensions of the reference objects with an average error < 5% between measured and model‐estimated dimensions for both length and volume. Manual inspection of models and semi‐automated surface‐to‐surface comparison allowed the computation of important metrics linked to the ecology of temperate reefs such as volume, surface area, surface complexity/rugosity, number and size of holes and creeks and the mean density of living worms per colony. Moreover we demonstrated the reliability of 3D surface complexity estimates against two linear rugosity measures: a traditional and a virtual variant of the ‘chain‐and‐tape’ method. Finally, besides 3D models deviation analysis via surface comparison, a Bayesian latent variable model approach was adopted to highlight the significative effects of sea state conditions on S. alveolata hummocks metrics. We demonstrated without damaging the benthic organisms that SfM approach allow continuous study of temperate bioconstruction leading to a fine description of short‐term structural modification mediated by hydrodynamics, making this technique accessible and repeatable to many other areas of ecological research

    Methods to study organogenesis in decapod crustacean larvae. I. larval rearing, preparation, and fixation

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