Constraints on grain formation around carbon stars from laboratory studies of presolar graphite

We report the results of an investigation into the physical conditions in the mass outflows of asymptotic giant branch (AGB) carbon stars that are required for the formation of micron-sized presolar graphite grains, with and without previously formed internal crystals of titanium carbide (TiC). A lower mass limit of 1.1 M⊙ for stars capable of contributing grains to the solar nebula is derived. This mass limit, in conjunction with a mass-luminosity relation for carbon stars, identifies the region of the H-R diagram relevant to the production of presolar graphite. Detailed dynamical models of AGB outflows, along with constraints provided by kinetics and equilibrium thermodynamics, indicate that grain formation occurs at radii from 2.3 to 3.7 AU for AGB carbon stars in the 1.1-5 M⊙ range. This analysis also yields time intervals available for graphite growth that are on the order of a few years. By considering the luminosity variations of carbon stars, we show that grains formed during minima in the luminosity are likely to be evaporated subsequently, while those formed at luminosity maxima will survive. We calculate strict upper limits on grain sizes for graphite and TiC in spherically symmetric AGB outflows. Graphite grains can reach diameters in the observed micron size range (1-2 µm) only under ideal growth conditions (perfect sticking efficiency, no evaporation, no depletion of gas species contributing to grain growth), and then only in outflows from carbon stars with masses ≲ 2.5 M⊙. The same is true for TiC grains that are found within presolar graphite, which have mean diameters of 24 ± 14 nm. In general, the mass-loss rates that would be required to produce the observed grain sizes in spherically symmetric outflows are at least an order of magnitude larger than the maximum observed AGB carbon star mass-loss rates. These results, as well as pressure constraints derived from equilibrium thermodynamics, force us to conclude that presolar graphite and TiC must form in regions of enhanced density (clumps, jets) in AGB outflows having small angular scales. As shown in the companion paper by Croat et al., the enrichment of 12C in many AGB graphites, and the overabundances of the s-process elements Mo, Zr, and Ru in the carbides found within them, often greatly exceed the values observed astronomically in AGB outflows. These observations not only lend further support to the idea that the outflows are clumpy, but also imply that the outflowing matter is not well mixed in the circumstellar envelope out to the radii where grain condensation takes place

Lianas Have A Seasonal Growth Advantage Over Co‐Occurring Trees

The seasonal growth advantage hypothesis posits that plant species that grow well during seasonal drought will increase in abundance in forests with increasing seasonality of rainfall both in absolute numbers and also relative to co‐occurring plant species that grow poorly during seasonal drought. That is, seasonal drought will give some plant species a growth advantage that they lack in aseasonal forests, thus allowing them attain higher abundance. For tropical forest plants, the seasonal growth advantage hypothesis may explain the distribution of drought‐adapted species across large‐scale gradients of rainfall and seasonality. We tested the seasonal growth advantage hypothesis with lianas and trees in a seasonal tropical forest in central Panama. We measured the dry‐season and wet‐season diameter growth of 1,117 canopy trees and 648 canopy lianas from 2011 to 2016. We also evaluated how lianas and trees responded to the 2015–2016 El Niño, which was the third strongest el Niño drought on record in Panama. We found that liana growth rate was considerably higher during the dry‐season months than the wet‐season months in each of the five years. Lianas achieved one‐half of their annual growth during the 4‐month dry season. By contrast, trees grew far more during the wet season; they realized only one‐quarter of their annual growth during the dry season. During the strong 2015–2016 El Niño dry season, trees essentially stopped growing, whereas lianas grew unimpeded and as well as during any of the previous four dry seasons. Our findings support the hypothesis that seasonal growth gives lianas a decided growth advantage over trees in seasonal forests compared to aseasonal forests, and may explain why lianas peak in both absolute and relative abundance in highly seasonal tropical forests. Furthermore, the ability of lianas to grow during a strong el Niño drought suggests that lianas will benefit from the predicted increasing drought severity, whereas trees will suffer, and thus lianas are predicted to increase in relative abundance in seasonal tropical forests

Lianas Reduce Community-level Canopy Tree Reproduction in a Panamanian Forest

Lianas are a key component of tropical forests, where they compete intensely with trees, reducing tree recruitment, growth and survival. One of the most important potential outcomes of liana competition is the reduction of tree reproduction; however, no previous study has experimentally determined the effects of lianas on tree reproduction beyond a single tree species. We used a large‐scale liana removal experiment to quantify the effect of lianas on community‐level canopy and understorey tree and palm reproduction. In 2011, we removed lianas from eight 6,400‐m2 plots (eight plots served as controls) and surveyed understorey tree reproduction in 2012, canopy tree and palm reproduction in 2013, and a second census of all plants in 2016. We found that lianas significantly reduced canopy tree community flowering and fruiting after liana removal. Two years after liana removal, the number of canopy trees with fruits was 173% higher, fruiting individuals had 50% more of their canopy covered by fruits and the number of tree species with fruits was 169% higher than in control plots where lianas were present. Five years after liana removal, the number of canopy trees with fruits was 150% higher, fruiting individuals had 31% more of their canopy covered by fruits and the number of tree species with fruits was 109% higher than in unmanipulated control plots. Liana removal had only a slight positive effect on palms and on understorey tree flower and fruit production, even though understorey light levels had increased 20% following liana cutting. Synthesis. Our findings provide the first experimental demonstration that competition from lianas significantly reduces community‐level canopy tree reproduction. Reduced reproduction increases canopy tree seed and dispersal limitations, and may interfere with deterministic mechanisms thought to maintain tropical canopy tree species diversity, as well as reduce food availability to many animal species. Because lianas are increasing in abundance in many neotropical forests, the effects of lianas on tree reproduction will likely increase, and if the effects of lianas on tree reproduction vary with tree species identity, lianas ultimately could have a destabilizing effect on both tree and animal population dynamics

Tree Species Vary Widely in Their Tolerance for Liana Infestation: A Case Study of Differential Host Response to Generalist Parasites

Lianas are structural parasites of trees and reduce individual host tree growth, survival and fecundity. Thus, liana infestation is expected to affect tree population growth rates, with potentially different effects in different species depending on the frequency of liana infestation and the impact of liana infestation on population growth rates. Previous studies have documented the myriad negative effects of lianas on trees and variation in liana infestation among tree species; however, no study has quantified the impact of liana infestation on individual tree species population growth rates. Lianas are increasing in abundance in multiple Neotropical sites, which may have profound consequences for tree species composition if lianas differentially affect host tree species population growth. Here, we use long‐term data to evaluate the effects of liana infestation on the reproduction, growth, survival and ultimately population growth rates of dozens of tree species from Barro Colorado Island, Panama. We then test whether liana infestation affects tree species differentially with respect to two axes of life‐history variation: adult stature and position along the fast–slow axis, a measure of shade tolerance. Liana infestation decreased tree growth, survival and reproduction, with the strongest effects on survival in fast‐growing, light‐demanding species and on reproduction in large‐statured species. In combination, these effects reduced tree population growth rates such that liana‐infested populations declined by an average of 1.4% annually relative to conspecific liana‐free populations. The reduction in population growth rates was greatest among fast‐growing species and smaller in slow‐growing species. Synthesis. Our results demonstrate that liana infestation has strong negative effects on tree population growth rates, which vary systematically among tree species with tree life history. The finding that liana infestation is more harmful to fast‐growing tree species appears to be at odds with the general expectations in the literature. We propose that this is likely due to survivorship bias, as infestation greatly decreases survival in fast‐growing species such that the observable sample is biased towards those that survived and liana‐free. In combination with data on how tree species vary in liana infestation rates, these results provide a basis for predicting the impacts of changes in liana abundance on tree species composition

Chloroplast genome evolution in the Dracunculus clade (Aroideae, Araceae)

Chloroplast (cp) genomes are considered important for the study of lineage-specific molecular evolution, population genetics, and phylogenetics. Our aim here was to elucidate the molecular evolution in cp genomes of species in the Dracunculus clade (Aroideae, Araceae). We report de novo assembled cp genomes for eight species from eight genera and also retrieved cp genomes of four species from the National Center for Biotechnology Information (NCBI). The cp genomes varied in size from 162,424 bp to 176,835 bp. Large Single Copy (LSC) region ranged in size from 87,141 bp to 95,475 bp; Small Single Copy (SSC) from 14,338 bp to 23,981 bp; and Inverted Repeats (IRa and IRb) from 25,131 bp to 32,708 bp. The expansion in inverted repeats led to duplication of ycf1 genes in four species. The genera showed high similarity in gene content and yielded 113 unique genes (79 protein-coding, 4 rRNA, and 30 tRNA genes). Codon usage, amino acid frequency, RNA editing sites, microsatellites repeats, transition and transversion substitutions, and synonymous and non-synonymous substitutions were also similar across the clade. A previous study reported deletion of ycf1, accD, psbE, trnL-CAA, and trnG-GCC genes in four Amorphophallus species. Our study supports conservative structure of cp genomes in the Dracunculus clade including Amorphophallus species and does not support gene deletion mentioned above. We also report suitable polymorphic loci based on comparative analyses of Dracunculus clade species, which could be useful for phylogenetic inference. Overall, the current study broad our knowledge about the molecular evolution of chloroplast genome in aroids.Peer reviewe

Genome size in Anthurium evaluated in the context of karyotypes and phenotypes

Little is known about the genome of Anthurium other than chromosome observations, which frequently indicate supernumerary (“B”) chromosomes. New genome size estimates for 34 species and nine cultivars presented here provide insights into genome organization and evolution in this very large genus

Phylogenetic and ecological correlates of pollen morphological diversity in a Neotropical rainforest

Morphology varies enormously across clades, and the morphology of a trait may reflect ecological function or the retention of ancestral features. We examine the tension between ecological and phylogenetic correlates of morphological diversity through a case study of pollen grains produced by angiosperms in Barro Colorado Island, Panama (BCI). Using a molecular phylogeny of 730 taxa, we demonstrate a statistically significant association between morphological and genetic distance for these plants. However, the relationship is non‐linear, and while close relatives share more morphological features than distant relatives, above a genetic distance of ~ 0.7 increasingly distant relatives are not more divergent in phenotype. The pollen grains of biotically pollinated and abiotically pollinated plants overlap in morphological space, but certain pollen morphotypes and individual morphological traits are unique to these pollination ecologies. Our data show that the pollen grains of biotically pollinated plants are significantly more morphologically diverse than those of abiotically pollinated plants

Interactive web-taxonomy for the Araceae: www.cate-araceae.org

CATE (Creating a Taxonomic E-science) is a pilot project funded by the UK Natural Environment Research Council (NERC) to test a model of internet taxonomy which aims to construct and maintain online a full descriptive taxonomic revision as a collective enterprise carried out by the specialist taxonomic community. The software application includes the functionality to allow taxonomists to make contributions and proposals for change that are passed for peer review to an editorial and moderating body drawn from the taxonomic community. The model is being tested on the Hawkmoths (Sphingidae) and Aroid (Araceae) families. The paper describes the aims of the project and current progress on the Araceae e-revision