Riquesa d'espècies i interès per a la conservació dels ocells a l'àrea metropolitana de Barcelona : relacions amb la xarxa actual d'espais protegits

En aquest treball s'analitza la distribució espacial de la riquesa d'espècies d'ocells i la seva relació amb diverses variables territorials i amb la distribució dels espais del Pla d'Espais d'Interès Natural de Catalunya (PEIN) en tres conjunts d'espècies amb un interès de conservació contrastat: (1) el total d'espècies; (2) les que tenen un estatus de conservació desfavorable a Europa (categories 2 i 3 de la classificació SPEC [Species of European Conservation Concern; Tucker & Heath, 1994]; és a dir, SPEC 2+3); i (3) les incloses a l'Annex I de la Directiva del Consell 79/409/EEC per a la conservació de les aus silvestres (Directiva Ocells). L'estudi es va dur a terme al Vallès Oriental i àrees limítrofes. La riquesa d'espècies d'ocells es va obtenir d'un mostreig de camp previ, realitzat durant vuit anys separadament per a les espècies nidificants (primavera) i hivernants (hivern), i prenent com a unitat d'estudi les quadrícules UTM d'1 km × 1 km. La relació entre els diversos grups d'ocells i entre aquests i les variables territorials més significatives es va dur a terme mitjançant correlacions de Pearson. També es van comparar els valors de riquesa d'espècies dels grups estudiats i de les variables territorials seleccionades dins i fora dels espais del PEIN sobre una mostra aleatòria de les quadrícules. La riquesa total i el nombre d'espècies SPEC 2+3 són significativament més alts fora dels espais del PEIN, i es concentren en els mosaics agroforestals del Moianès i Osona per a les nidificants, i a la plana del Vallès per a les hivernants. Tots aquests grups d'espècies presenten correlacions positives i significatives amb la proporció de conreus i la diversitat de cobertes del sòl. La riquesa d'SPEC 2+3 mostra, a més, unes correlacions moderadament altes amb la riquesa total d'ocells. Contràriament, la riquesa d'espècies incloses a la Directiva Ocells segueix patrons de distribució diferents, amb alguns hot spots locals dins del Parc Natural del Montseny, i com a conseqüència, les correlacions amb la riquesa total i SPEC 2+3 són discretes. L'estudi posa de manifest un panorama de conservació complex al Vallès Oriental, amb uns espais protegits que afavoreixen la conservació d'algunes espècies de la Directiva Ocells i uns espais agroforestals molt rics en espècies, però no protegits per cap figura especial. També cal destacar la necessitat de potenciar i conservar els hàbitats oberts resultants d'un aprofitament agroramader extensiu,tant dins com fora dels espais protegits

Airborne LiDAR reveals a vast archaeological landscape at the Nan MadolWorld Heritage Site

An airborne LiDAR survey of the Nan MadolWorld Heritage Site and adjacent Temwen Island revealed a complex, irrigated cultivation system, the first found in the Central and Eastern Caroline Islands. This informs the goals of the sustainable conservation project, funded by the U.S. Department of State Ambassadors Fund for Cultural Preservation, that inspired the survey, and expands understanding of Nan Madol and its place in the network of Pacific island interaction and trade. Fieldwork verified the presence, across Temwen, of low, wet, cultivable areas, many of which are connected by water channels or separated by earthen berms. The berms themselves may also have been cultivated. In complexity, labor investment, and organization, the system is comparable to Nan Madol itself, the largest archaeological site in Micronesia, with structures on about 100 artificial islets built of stone and coral on a reef flat. Constructed over a millennium, Nan Madol was the seat of the Saudeleur Dynasty, which persisted from about 1200 to 1600 CE. The cultivation system appears to have been able to provide ample food for consumption, feasting, and redistribution or trade. If the landscape alteration described here proves to date to the time of the Saudeleur Dynasty, it will offer many avenues of research into the economic basis of Nan Madol's regional dominance.This research was funded by the U.S. Department of State via an Ambassadors Fund for Cultural Preservation large grant, award number SLMAQM18GR222

Transplacental Transmission of Leishmania infantum as a Means for Continued Disease Incidence in North America

Dogs are a favored feeding source for sand flies that transmit human L. infantum infection. Zoonotic visceral leishmaniasis (ZVL) is an emerging problem in some U.S. dog breeds, with over 20% of at-risk Foxhounds infected. Although classically Leishmania is transmitted by infected sand flies which exist in the United States, no role has yet been determined for vector-borne transmission. Means of ongoing L. infantum transmission in U.S. dogs is unknown. Possibilities include transplacental and horizontal/venereal transmission. Aims for this study were to establish whether transplacental transmission occurred in Leishmania-infected U.S. dogs and determine the effect of this transmission on immune recognition of Leishmania. This novel report describes wide-spread infection as identified by kqPCR in 8 day-old pups born to a naturally-infected, seropositive U.S. dog with no travel history. This is the first report of transplacental transmission of L. infantum in naturally-infected dogs in North America. Evidence that mom-to-pup transmission of ZVL may continue disease in an otherwise non-endemic region has significant implications on current control strategies for ZVL. Determining frequency of vertical transmission and incorporating canine sterilization with vector control may have a more significant impact on ZVL transmission to people in endemic areas than current control efforts

The James Webb Space Telescope Mission

Twenty-six years ago a small committee report, building on earlier studies, expounded a compelling and poetic vision for the future of astronomy, calling for an infrared-optimized space telescope with an aperture of at least $4m$. With the support of their governments in the US, Europe, and Canada, 20,000 people realized that vision as the $6.5m$ James Webb Space Telescope. A generation of astronomers will celebrate their accomplishments for the life of the mission, potentially as long as 20 years, and beyond. This report and the scientific discoveries that follow are extended thank-you notes to the 20,000 team members. The telescope is working perfectly, with much better image quality than expected. In this and accompanying papers, we give a brief history, describe the observatory, outline its objectives and current observing program, and discuss the inventions and people who made it possible. We cite detailed reports on the design and the measured performance on orbit.Comment: Accepted by PASP for the special issue on The James Webb Space Telescope Overview, 29 pages, 4 figure

Determining crystal structures through crowdsourcing and coursework

We show here that computer game players can build high-quality crystal structures. Introduction of a new feature into the computer game Foldit allows players to build and real-space refine structures into electron density maps. To assess the usefulness of this feature, we held a crystallographic model-building competition between trained crystallographers, undergraduate students, Foldit players and automatic model-building algorithms. After removal of disordered residues, a team of Foldit players achieved the most accurate structure. Analysing the target protein of the competition, YPL067C, uncovered a new family of histidine triad proteins apparently involved in the prevention of amyloid toxicity. From this study, we conclude that crystallographers can utilize crowdsourcing to interpret electron density information and to produce structure solutions of the highest quality

Comparison of Severe Acute Respiratory Syndrome Coronavirus 2 Screening Using Reverse Transcriptase-Quantitative Polymerase Chain Reaction or CRISPR-Based Assays in Asymptomatic College Students.

ImportanceThe reopening of colleges and universities in the US during the coronavirus disease 2019 (COVID-19) pandemic is a significant public health challenge. The development of accessible and practical approaches for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) detection in the college population is paramount for deploying recurrent surveillance testing as an essential strategy for virus detection, containment, and mitigation.ObjectiveTo determine the prevalence of SARS-CoV-2 in asymptomatic participants in a university community by using CREST (Cas13-based, rugged, equitable, scalable testing), a CRISPR-based test developed for accessible and large-scale viral screening.Design, setting, and participantsFor this cohort study, a total of 1808 asymptomatic participants were screened for SARS-CoV-2 using a CRISPR-based assay and a point-of-reference reverse transcriptase-quantitative polymerase chain reaction (RT-qPCR) test. Viral prevalence in self-collected oropharyngeal swab samples collected from May 28 to June 11, 2020, and from June 23 to July 2, 2020, was evaluated.ExposuresTesting for SARS-CoV-2.Main outcomes and measuresSARS-CoV-2 status, viral load, and demographic information of the study participants were collected.ResultsAmong the 1808 participants (mean [SD] age, 27.3 [11.0] years; 955 [52.8%] female), 732 underwent testing from May to early June (mean [SD] age, 28.4 [11.7] years; 392 [53.6%] female). All test results in this cohort were negative. In contrast, 1076 participants underwent testing from late June to early July (mean [SD] age, 26.6 [10.5] years; 563 [52.3%] female), with 9 positive results by RT-qPCR. Eight of these positive samples were detected by the CRISPR-based assay and confirmed by Clinical Laboratory Improvement Amendments-certified diagnostic testing. The mean (SD) age of the positive cases was 21.7 (3.3) years; all 8 individuals self-identified as students. These metrics showed that a CRISPR-based assay was effective at capturing positive SARS-CoV-2 cases in this student population. Notably, the viral loads detected in these asymptomatic cases resemble those seen in clinical samples, highlighting the potential of covert viral transmission. The shift in viral prevalence coincided with the relaxation of stay-at-home measures.Conclusions and relevanceThese findings reveal a shift in SARS-CoV-2 prevalence in a young and asymptomatic population and uncover the leading edge of a local outbreak that coincided with rising case counts in the surrounding county and the state of California. The concordance between CRISPR-based and RT-qPCR testing suggests that CRISPR-based assays are reliable and offer alternative options for surveillance testing and detection of SARS-CoV-2 outbreaks, as is required to resume operations in higher-education institutions in the US and abroad

Comparison of Severe Acute Respiratory Syndrome Coronavirus 2 Screening Using Reverse Transcriptase-Quantitative Polymerase Chain Reaction or CRISPR-Based Assays in Asymptomatic College Students.

ImportanceThe reopening of colleges and universities in the US during the coronavirus disease 2019 (COVID-19) pandemic is a significant public health challenge. The development of accessible and practical approaches for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) detection in the college population is paramount for deploying recurrent surveillance testing as an essential strategy for virus detection, containment, and mitigation.ObjectiveTo determine the prevalence of SARS-CoV-2 in asymptomatic participants in a university community by using CREST (Cas13-based, rugged, equitable, scalable testing), a CRISPR-based test developed for accessible and large-scale viral screening.Design, setting, and participantsFor this cohort study, a total of 1808 asymptomatic participants were screened for SARS-CoV-2 using a CRISPR-based assay and a point-of-reference reverse transcriptase-quantitative polymerase chain reaction (RT-qPCR) test. Viral prevalence in self-collected oropharyngeal swab samples collected from May 28 to June 11, 2020, and from June 23 to July 2, 2020, was evaluated.ExposuresTesting for SARS-CoV-2.Main outcomes and measuresSARS-CoV-2 status, viral load, and demographic information of the study participants were collected.ResultsAmong the 1808 participants (mean [SD] age, 27.3 [11.0] years; 955 [52.8%] female), 732 underwent testing from May to early June (mean [SD] age, 28.4 [11.7] years; 392 [53.6%] female). All test results in this cohort were negative. In contrast, 1076 participants underwent testing from late June to early July (mean [SD] age, 26.6 [10.5] years; 563 [52.3%] female), with 9 positive results by RT-qPCR. Eight of these positive samples were detected by the CRISPR-based assay and confirmed by Clinical Laboratory Improvement Amendments-certified diagnostic testing. The mean (SD) age of the positive cases was 21.7 (3.3) years; all 8 individuals self-identified as students. These metrics showed that a CRISPR-based assay was effective at capturing positive SARS-CoV-2 cases in this student population. Notably, the viral loads detected in these asymptomatic cases resemble those seen in clinical samples, highlighting the potential of covert viral transmission. The shift in viral prevalence coincided with the relaxation of stay-at-home measures.Conclusions and relevanceThese findings reveal a shift in SARS-CoV-2 prevalence in a young and asymptomatic population and uncover the leading edge of a local outbreak that coincided with rising case counts in the surrounding county and the state of California. The concordance between CRISPR-based and RT-qPCR testing suggests that CRISPR-based assays are reliable and offer alternative options for surveillance testing and detection of SARS-CoV-2 outbreaks, as is required to resume operations in higher-education institutions in the US and abroad