3,210 research outputs found
Student Satisfaction and Quality Improvement for an Alzheimer’s Virtual Interprofessional Training (AVIT) Program
Learning Objectives Identify key areas of focus for addressing student satisfaction in 3-DVW IPE simulations Discuss specific quality improvement strategies targeting student satisfaction and engagement based on the Flexible Learning Model Apply findings of the continuous quality improvement (CQI) strategies used in the AVIT 3-D virtual world simulation to their own approaches to CQI for virtual simulation
Machine learning algorithms for systematic review: reducing workload in a preclinical review of animal studies and reducing human screening error
BACKGROUND: Here, we outline a method of applying existing machine learning (ML) approaches to aid citation screening in an on-going broad and shallow systematic review of preclinical animal studies. The aim is to achieve a high-performing algorithm comparable to human screening that can reduce human resources required for carrying out this step of a systematic review. METHODS: We applied ML approaches to a broad systematic review of animal models of depression at the citation screening stage. We tested two independently developed ML approaches which used different classification models and feature sets. We recorded the performance of the ML approaches on an unseen validation set of papers using sensitivity, specificity and accuracy. We aimed to achieve 95% sensitivity and to maximise specificity. The classification model providing the most accurate predictions was applied to the remaining unseen records in the dataset and will be used in the next stage of the preclinical biomedical sciences systematic review. We used a cross-validation technique to assign ML inclusion likelihood scores to the human screened records, to identify potential errors made during the human screening process (error analysis). RESULTS: ML approaches reached 98.7% sensitivity based on learning from a training set of 5749 records, with an inclusion prevalence of 13.2%. The highest level of specificity reached was 86%. Performance was assessed on an independent validation dataset. Human errors in the training and validation sets were successfully identified using the assigned inclusion likelihood from the ML model to highlight discrepancies. Training the ML algorithm on the corrected dataset improved the specificity of the algorithm without compromising sensitivity. Error analysis correction leads to a 3% improvement in sensitivity and specificity, which increases precision and accuracy of the ML algorithm. CONCLUSIONS: This work has confirmed the performance and application of ML algorithms for screening in systematic reviews of preclinical animal studies. It has highlighted the novel use of ML algorithms to identify human error. This needs to be confirmed in other reviews with different inclusion prevalence levels, but represents a promising approach to integrating human decisions and automation in systematic review methodology
Supporting systematic reviews using LDA-based document representations
BACKGROUND: Identifying relevant studies for inclusion in a systematic review (i.e. screening) is a complex, laborious and expensive task. Recently, a number of studies has shown that the use of machine learning and text mining methods to automatically identify relevant studies has the potential to drastically decrease the workload involved in the screening phase. The vast majority of these machine learning methods exploit the same underlying principle, i.e. a study is modelled as a bag-of-words (BOW). METHODS: We explore the use of topic modelling methods to derive a more informative representation of studies. We apply Latent Dirichlet allocation (LDA), an unsupervised topic modelling approach, to automatically identify topics in a collection of studies. We then represent each study as a distribution of LDA topics. Additionally, we enrich topics derived using LDA with multi-word terms identified by using an automatic term recognition (ATR) tool. For evaluation purposes, we carry out automatic identification of relevant studies using support vector machine (SVM)-based classifiers that employ both our novel topic-based representation and the BOW representation. RESULTS: Our results show that the SVM classifier is able to identify a greater number of relevant studies when using the LDA representation than the BOW representation. These observations hold for two systematic reviews of the clinical domain and three reviews of the social science domain. CONCLUSIONS: A topic-based feature representation of documents outperforms the BOW representation when applied to the task of automatic citation screening. The proposed term-enriched topics are more informative and less ambiguous to systematic reviewers. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13643-015-0117-0) contains supplementary material, which is available to authorized users
Gate-Controlled Ionization and Screening of Cobalt Adatoms on a Graphene Surface
We describe scanning tunneling spectroscopy (STS) measurements performed on
individual cobalt (Co) atoms deposited onto backgated graphene devices. We find
that Co adatoms on graphene can be ionized by either the application of a
global backgate voltage or by the application of a local electric field from a
scanning tunneling microscope (STM) tip. Large screening clouds are observed to
form around Co adatoms ionized in this way, and we observe that some intrinsic
graphene defects display a similar behavior. Our results provide new insight
into charged impurity scattering in graphene, as well as the possibility of
using graphene devices as chemical sensors.Comment: 19 pages, 4 figure
CP Violation in Supersymmetry with Effective Minimal Flavour Violation
We analyze CP violation in supersymmetry with Effective Minimal Flavour
Violation, as recently proposed in arXiv:1011.0730. Unlike the case of standard
Minimal Flavour Violation, we show that all the phases allowed by the flavour
symmetry can be sizable without violating existing Electric Dipole Moment
constraints, thus solving the SUSY CP problem. The EDMs at one and two loops
are precisely analyzed as well as their correlations with the expected CP
asymmetries in B physics.Comment: 22 pages, 7 figures. v2: Discussion in section 2 extended,
conclusions unchanged. Matches published versio
Evidence maps and evidence gaps: evidence review mapping as a method for collating and appraising evidence reviews to inform research and policy
Evidence reviews are a key mechanism for incorporating extensive, complex and specialised evidence into policy and practice, and in guiding future research. However, evidence reviews vary in scope and methodological rigour, creating several risks for decision-makers: decisions may be informed by less reliable reviews; apparently conflicting interpretations of evidence may obfuscate decisions; and low quality reviews may create the perception that a topic has been adequately addressed, deterring new syntheses (cryptic evidence gaps). We present a new approach, evidence review mapping, designed to produce a visual representation and critical assessment of the review landscape for a particular environmental topic or question. By systematically selecting and describing the scope and rigour of each review, this helps guide non-specialists to the most relevant and methodologically reliable reviews. The map can also direct future research through the identification of evidence gaps (whether cryptic or otherwise) and redundancy (multiple reviews on similar questions). We consider evidence review mapping a complementary approach to systematic reviews and systematic maps of primary literature and an important tool for facilitating evidence-based decision-making and research efficiency
Transposed Genes in Arabidopsis Are Often Associated with Flanking Repeats
Much of the eukaryotic genome is known to be mobile, largely due to the movement of transposons and other parasitic elements. Recent work in plants and Drosophila suggests that mobility is also a feature of many nontransposon genes and gene families. Indeed, analysis of the Arabidopsis genome suggested that as many as half of all genes had moved to unlinked positions since Arabidopsis diverged from papaya roughly 72 million years ago, and that these mobile genes tend to fall into distinct gene families. However, the mechanism by which single gene transposition occurred was not deduced. By comparing two closely related species, Arabidopsis thaliana and Arabidopsis lyrata, we sought to determine the nature of gene transposition in Arabidopsis. We found that certain categories of genes are much more likely to have transposed than others, and that many of these transposed genes are flanked by direct repeat sequence that was homologous to sequence within the orthologous target site in A. lyrata and which was predominantly genic in identity. We suggest that intrachromosomal recombination between tandemly duplicated sequences, and subsequent insertion of the circular product, is the predominant mechanism of gene transposition
Russian Artistic Gymnastics as a Sports Tourism Product: Some Observations and a Research Agenda
Tourism and its importance to the Russian Federation are very much in the headlines at present. Considering the huge investment made in facilities for the Winter Olympics, the building of new sports facilities for such mega events as the Football World Cup, and the status of St Petersburg as a candidate city for the 2028 Olympics, it is clear that Russia has long term plans to attract visitors to their sporting events. The purpose of this paper is to develop a research agenda to explore the potential of artistic gymnastics, a sport in which the Russian Federation has excelled for many years, as an agent of tourism development.
The paper will take a case study approach, considering the nature of fandom and identifying features of artistic gymnastics as cultural heritage and sports tourism product. The national and international environment within which it is set are examined, prior to the development of a research agenda. A detailed review of literature on the historic, current and emerging trends in Russian artistic gymnastics; the place of artistic gymnastics in tourism development and sports tourism in Russia will be carried out.
The paper’s findings will include considerations of:
• The nature of gymnastics fandom, both in Russia and internationally
• The nature of sports tourism development in the Russian Federation
• The nature of gymnastics as a sport and its competition cycle
• Artistic gymnastics as cultural heritage, and its potential as an autonomous means of promoting Russian national identity
• The relationship between Russia’s sometimes fading gymnastics competition results, and its potential to leverage the sport for tourism interest
• The potential for tourism product development linked to artistic gymnastics in the Russian Federation.
The paper contributes to the literature on the nature of sports tourism as it relates to artistic gymnastics in the Russian Federation in particular
Media coverage of climate change: an international comparison
We present an international comparison of broadsheet newspaper coverage of climate change. We employ two complementary theoretical lenses, multiple streams theory and institutional theory, to explore why climate change has become headline news in some countries but has received comparatively little coverage in others. The study utilises a worldwide sample across 41 different countries for the year 2008, covering 113 leading national broadsheet newspapers. A cross-sectional regression model is used to identify whether and how a range of contextual factors impact coverage of climate change. To a certain extent, a country’s direct exposure to climate change and the measures that have been taken to combat global warming influence the position of climate change on the media agenda. Crucially, however, we identify a number of contextual factors that impact climate change-related media coverage in different national contexts. In particular, we find a significantly positive relationship between regulatory quality and levels of media coverage. At the same time, unemployment trends are significantly negatively related to media attention to climate change. Gross domestic product per capita does not help to explain levels of climate change-related media coverage. In other words, climate change appears to have moved beyond simply being a ‘rich country issue’
A Light Stop with Flavor in Natural SUSY
The discovery of a SM-like Higgs boson near 125 GeV and the flavor texture of
the Standard Model motivate the investigation of supersymmetric quiver-like BSM
extensions. We study the properties of such a minimal class of models which
deals naturally with the SM parameters. Considering experimental bounds as well
as constraints from flavor physics and Electro-Weak Precision Data, we find the
following. In a self-contained minimal model - including the full dynamics of
the Higgs sector - top squarks below a TeV are in tension with b->s{\gamma}
constraints. Relaxing the assumption concerning the mass generation of the
heavy Higgses, we find that a stop not far from half a TeV is allowed. The
models have some unique properties, e.g. an enhancement of the h->
b\bar{b},\tau\bar{{\tau}} decays relative to the h->\gamma{\gamma} one, a
gluino about 3 times heavier than the stop, an inverted hierarchy of about 3-20
between the squarks of the first two generations and the stop, relatively light
Higgsino neutralino or stau NLSP, as well as heavy Higgses and a W' which may
be within reach of the LHC.Comment: LaTeX, 22 pages, 4 figures; V2: references adde
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