Targeted biolistics for improved transformation of impatiens balsamina

A transgenesis programme has been developed for Impatiens balsamina that will allow elucidation of the roles played by individual genes in the flower reversion phenomenon shown by this model species. The lack of explants exhibiting adventitious shooting in I. balsamina hinders Agrobacterium-based transformation, but the multiple shoots that arise from cotyledonary nodes present a suitable target for biolistics. These tissues can be disrupted by the helium blast effect associated with conventional biolistic devices, so we have utilised modifications to the PDS 1000/He equipment originally developed for transformation of fragile insect tissues. By loading microcarriers on to a rigid, rather than flexible, macrocarrier, the blast effect is largely eliminated, and the use of a focussing nozzle allows the bombardment to be concentrated on the target tissues. This approach reduces waste of plasmid DNA and gold microcarriers and achieves transfection at lower, less disruptive helium pressures than would otherwise be necessary to efficiently penetrate below the shoot epidermis and generate heritable transgenic lines

Molecular studies of floral meristem reversion and determinacy in Impatiens balsamina L

EThOS - Electronic Theses Online ServiceGBUnited Kingdo

Speed breeding orphan crops

This review explores how speed breeding protocols that hasten plant growth and development could be applied to shorten breeding cycles and accelerate research activities in orphan crops. There is a growing need for the agri-food sector to sustainably produce larger quantities of higher-quality food, feed and fuel using fewer resources, within the context of changing agroclimatic conditions. Meeting this challenge will require the accelerated development and dissemination of improved plant varieties and substantial improvement of agricultural practices. Speed breeding protocols that shorten plant generation times can hasten breeding and research to help fulfil the ever-increasing demands. Global agri-food systems rely on a relatively small number of plant species; however, there are calls to widen the scope of globally important crops to include orphan crops, which are currently grown and used by the world's poorest people or marketed as niche products for affluent consumers. Orphan crops can supply global diets with key nutrients, support economic development in the world's poorest regions, and bolster the resilience of the global agri-food sector to biotic and abiotic stresses. Little research effort has been invested in orphan crops, with farmers growing landraces that are sourced and traded through poorly structured market systems. Efforts are underway to develop breeding resources and techniques to improve orphan crops. Here, we highlight the current efforts and opportunities to speed breed orphan crops and discuss alternative approaches to deploy speed breeding in the less-resourced regions of the world. Speed breeding is a tool that, when used together with other multidisciplinary R&D approaches, can contribute to the rapid creation of new crop varieties, agricultural practices and products, supporting the production and utilisation of orphan crops at a commercial scale

Development of new quantitative physiological and molecular breeding parameters based on the sugar beet vernalization intensity model.

Sugar-beet crops, Beta vulgaris spp. vulgaris (L), suffer from premature bolting and flowering as a consequence of prolonged exposure to cold conditions (vernalization). This reduces crop yield and quality and could be avoided if bolting-resistant varieties were available. Traditionally, development of bolting-resistant varieties has relied on selection against the annual growth habit associated with the bolting gene B. However, this has failed to deliver crops that can be reliably sown in early spring or grown over winter without the risk of bolting. New breeding targets and selection strategies are required and have become tractable with the recent development of the vernalization-intensity model. This model uses parameters for the intensity and duration of vernalization (vernalization hours) to predict bolting responses and discriminates between varieties by the minimum number of vernalization hours needed to induce bolting (vernalization requirement (VR)) and by the increase in bolting incidence for each extra vernalizing hour once the VR has been satisfied (bolting sensitivity (BS)). Since the vernalization-intensity model was developed from variety-assessment trials data, the present work sought to refine and test it through controlled environment (CE) experiments in which seven sugar-beet varieties were exposed to differing levels of accurately defined vernalization treatments and scored for bolting rates to determine their VR and BS values. The results confirmed and improved the model and showed that VR, not BS, has more potential for developing bolting resistant varieties. It was also observed that there exist in current varieties, the genetic potential to breed for higher VR. Further experiments assessed the correlation of attainment of VR with changes in gene expression and shoot apical meristem (SAM) morphology to identify potential markers for this trait. It was found that the time when VR is attained correlates with up-regulation of gibberellin biosynthetic genes and floral transcription factors in leaf and shoot apices; most prominently, GIBBERELLIN 20-OXIDASE 2 (BvGA20ox2) and FLOWERING LOCUS T 2 (BvFT2). To integrate the results with weather data, temperature records for the past 47 years from the Broom's Barn weather station were used to develop a tool for predicting accumulated vernalization hours based on sowing date. The results, together with data from the CE experiments, were used to establish VR-breeding targets for bolting-resistant varieties for spring- and autumn-sown sugar-beet crops. The present paper shows that integration of weather, VR and genetic data provide useful tools to aid both cultivation and breeding selection. For growers, it provides a weather data tool to assist with the selection of suitable sowing dates. For breeders, it provides the first identification of molecular genetic factors that correlate with VR and the physiological changes associated with vernalization responses in sugar beet. The results suggest that gene-expression profiles can be developed into tools for quantifying bolting resistance in beet, thereby providing a cost-effective, high-throughput and simple method for breeders to apply the vernalization-intensity model.Peer reviewe

Plant genetic resources for food and agriculture: opportunities and challenges emerging from the science and information technology revolution

Over the last decade, there has been an ongoing revolution in the exploration, manipulation, and synthesis of biological systems, through the development of new technologies that generate, analyse and exploit big data. Users of Plant Genetic Resources (PGR) can potentially leverage these capacities to significantly increase the efficiency and effectiveness of their efforts to conserve, discover and utilise novel qualities in PGR, and help achieve the Sustainable Development Goals (SDGs). This review advances the discussion on these emerging opportunities and discusses how taking advantage of them will require data integration and synthesis across disciplinary, organisational and international boundaries, and the formation of multi-disciplinary, international partnerships. We explore some of the institutional and policy challenges that these efforts will face, particularly how these new technologies may influence the structure and role of research for sustainable development, ownership of resources, and access and benefit sharing. We discuss potential responses to political and institutional challenges, ranging from options for enhanced structure and governance of research discovery platforms to internationally brokered benefit-sharing agreements, and identify a set of broad principles that could guide the global community as it seeks or considers solutions.This is the peer reviewed version of the following article: Halewood, Michael, Tinashe Chiurugwi, Ruaraidh Sackville Hamilton, Brad Kurtz, Emily Marden, Eric Welch, Frank Michiels et al. "Plant genetic resources for food and agriculture: opportunities and challenges emerging from the science and information technology revolution." New Phytologist 217, no. 4 (2018): 1407-1419, which has been published in final form at doi:10.1111/nph.14993. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions.</p

Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery

The rate of annual yield increases for major staple crops must more than double relative to current levels in order to feed a predicted global population of 9 billion by 2050. Controlled hybridization and selective breeding have been used for centuries to adapt plant and animal species for human use. However, achieving higher, sustainable rates of improvement in yields in various species will require renewed genetic interventions and dramatic improvement of agricultural practices. Genomic prediction of breeding values has the potential to improve selection, reduce costs and provide a platform that unifies breeding approaches, biological discovery, and tools and methods. Here we compare and contrast some animal and plant breeding approaches to make a case for bringing the two together through the application of genomic selection. We propose a strategy for the use of genomic selection as a unifying approach to deliver innovative ‘step changes’ in the rate of genetic gain at scale

Leafy, terminal flower1 and agamous are functionally conserved but do not regulate terminal flowering and floral determinacy in Impatiens balsamina

In Impatiens balsamina a lack of commitment of the meristem during floral development leads to the continuous requirement for a leaf-derived floral signal. In the absence of this signal the meristem reverts to leaf production. Current models for Arabidopsis state that LEAFY (LFY) is central to the integration of floral signals and regulates flowering partly via interactions with TERMINAL FLOWER1 (TFL1) and AGAMOUS (AG). Here we describe Impatiens homologues of LFY, TFL1 and AG (IbLFY, IbTFL1 and IbAG) that are highly conserved at a sequence level and demonstrate homologous functions when expressed ectopically in transgenic Arabidopsis. We relate the expression patterns of IbTFL1 and IbAG to the control of terminal flowering and floral determinacy in Impatiens. IbTFL1 is involved in controlling the phase of the axillary meristems and is expressed in axillary shoots and axillary meristems which produce inflorescences, but not in axillary flowers. It is not involved in maintaining the terminal meristem in either an inflorescence or indeterminate state. Terminal flowering in Impatiens appears therefore to be controlled by a pathway that uses a different integration system than that regulating the development of axillary flowers and branches. The pattern of ovule production in Impatiens requires the meristem to be maintained after the production of carpels. Consistent with this morphological feature IbAG appears to specify stamen and carpel identity, but is not sufficient to specify meristem determinacy in Impatiens