Validation of a Salivary RNA Test for Childhood Autism Spectrum Disorder

Background: The diagnosis of autism spectrum disorder (ASD) relies on behavioral assessment. Efforts to define biomarkers of ASD have not resulted in an objective, reliable test. Studies of RNA levels in ASD have demonstrated potential utility, but have been limited by a focus on single RNA types, small sample sizes, and lack of developmental delay controls. We hypothesized that a saliva-based poly-“omic” RNA panel could objectively distinguish children with ASD from their neurotypical peers and children with non-ASD developmental delay.Methods: This multi-center cross-sectional study included 456 children, ages 19–83 months. Children were either neurotypical (n = 134) or had a diagnosis of ASD (n = 238), or non-ASD developmental delay (n = 84). Comprehensive human and microbial RNA abundance was measured in the saliva of all participants using unbiased next generation sequencing. Prior to analysis, the sample was randomly divided into a training set (82% of subjects) and an independent validation test set (18% of subjects). The training set was used to develop an RNA-based algorithm that distinguished ASD and non-ASD children. The validation set was not used in model development (feature selection or training) but served only to validate empirical accuracy.Results: In the training set (n = 372; mean age 51 months; 75% male; 51% ASD), a set of 32 RNA features (controlled for demographic and medical characteristics), identified ASD status with a cross-validated area under the curve (AUC) of 0.87 (95% CI: 0.86–0.88). In the completely separate validation test set (n = 84; mean age 50 months; 85% male; 60% ASD), the algorithm maintained an AUC of 0.88 (82% sensitivity and 88% specificity). Notably, the RNA features were implicated in physiologic processes related to ASD (axon guidance, neurotrophic signaling).Conclusion: Salivary poly-omic RNA measurement represents a novel, non-invasive approach that can accurately identify children with ASD. This technology could improve the specificity of referrals for ASD evaluation or provide objective support for ASD diagnoses

Co-generation of hydrogen and power/current pulses from supercapacitive MFCs using novel HER iron-based catalysts

© 2016 The Author(s) In this work, four different supercapacitive microbial fuel cells (SC-MFCs) with carbon brush as the anode and an air-breathing cathode with Fe-Aminoantipyrine (Fe-AAPyr) as the catalyst have been investigated using galvanostatic discharges. The maximum power (Pmax) obtained was in the range from 1.7 mW to 1.9 mW for each SC-MFC. This in-series connection of four SC-MFCs almost quadrupled Pmax to an operating voltage of 3025 mV and a Pmax of 8.1 mW, one of the highest power outputs reported in the literature. An additional electrode (AdHER) connected to the anode of the first SC-MFC and placed in the fourth SC-MFC evolved hydrogen. The hydrogen evolution reaction (HER) taking place at the electrode was studied on Pt and two novel platinum group metal-free (PGM-free) catalysts: Fe-Aminoantipyrine (Fe-AAPyr) and Fe-Mebendazole (Fe-MBZ). The amount of H2 produced was estimated using the Faraday law as 0.86 mMd−1cm−2 (0.132 L day−1) for Pt, 0.83 mMd−1cm−2 (0.127 L day−1) for Fe-AAPyr and 0.8 mMd−1cm−2 (0.123 L day−1) for Fe-MBZ. Hydrogen evolution was also detected using gas chromatography. While HER was taking place, galvanostatic discharges were also performed showing simultaneous H2 production and pulsed power generation with no need of external power sources

How Comparable are Microbial Electrochemical Systems around the Globe? An Electrochemical and Microbiological Cross‐Laboratory Study

A cross‐laboratory study on microbial fuel cells (MFC) which involved different institutions around the world is presented. The study aims to assess the development of autochthone microbial pools enriched from domestic wastewater, cultivated in identical single‐chamber MFCs, operated in the same way, thereby approaching the idea of developing common standards for MFCs. The MFCs are inoculated with domestic wastewater in different geographic locations. The acclimation stage and, consequently, the startup time are longer or shorter depending on the inoculum, but all MFCs reach similar maximum power outputs (55±22 μW cm−2) and COD removal efficiencies (87±9 %), despite the diversity of the bacterial communities. It is inferred that the MFC performance starts when the syntrophic interaction of fermentative and electrogenic bacteria stabilizes under anaerobic conditions at the anode. The generated power is mostly limited by electrolytic conductivity, electrode overpotentials, and an unbalanced external resistance. The enriched microbial consortia, although composed of different bacterial groups, share similar functions both on the anode and the cathode of the different MFCs, resulting in similar electrochemical output

Maximizing Food Waste Recovery: Developing an Approach for Expanding Collection and Engagement at WPI

This project aims to increase engagement in sustainable food disposal at WPI and assess the feasibility of implementing a campus-wide food waste collection system. To help us reach our goals, our team conducted extensive research, including interviews, surveys, and observations, to gain more knowledge about the present tendencies of WPI community members and the current food waste collection system at WPI and other institutions. We concluded that WPI should improve the accessibility of food waste bins around campus and find new ways to engage and educate members. With our findings, we were able to create feasible recommendations that will best suit WPI

Reading Coaches for a 40 Book Challenge: Creating an Online Reading Community to Support Sixth Graders’ Independent Reading

English teacher candidates, or “Reading Coaches,” conducted virtual reading conferences with sixth graders using the digital platforms Zoom and Flip to support students’ independent reading as part of a 40 Book Challenge in an online and blended learning environment during the COVID-19 pandemic. As evidence of students’ participation and engagement, we present survey results and draw from conference records, observation notes, and a content analysis of video transcripts, triangulating across data sets to illuminate important design features. Connecting research with practice, we offer educators tangible resources of a Conference Guide, Flip design, record-keeping system, and training materials, as well as considerations for cultivating a reading community that extends beyond the physical classroom to support students’ independent reading through digital platforms

Phosphorylation-Mediated Clearance of Amyloid-like Assemblies in Meiosis

Amyloids are fibrous protein assemblies that are often described as irreversible and intrinsically pathogenic. However, yeast cells employ amyloid-like assemblies of the RNA-binding protein Rim4 to control translation during meiosis. Here, we show that multi-site phosphorylation of Rim4 is critical for its regulated disassembly and degradation and that failure to clear Rim4 assemblies interferes with meiotic progression. Furthermore, we identify the protein kinase Ime2 to bring about Rim4 clearance via phosphorylation of Rim4's intrinsically disordered region. Rim4 phosphorylation leads to reversal of its amyloid-like properties and degradation by the proteasome. Our data support a model in which a threshold amount of phosphorylation, rather than modification of critical residues, is required for Rim4 clearance. Our results further demonstrate that at least some amyloid-like assemblies are not as irreversible as previously thought. We propose that the natural pathways by which cells process these structures could be deployed to act on disease-related amyloids. Amyloids, fibrous protein assemblies associated with numerous diseases, are often referred to as being irreversible structures. Carpenter et al. demonstrate that, in coordination with meiotic development, budding yeast are able to disassemble and clear the amyloid-like translational repressor Rim4 by multi-site phosphorylation of residues within disordered regions of the protein