Broad-band X-ray analysis of local mid-infrared selected Compton-thick AGN candidates

The estimate of the number and space density of obscured AGN over cosmic time still represents an open issue. While the obscured AGN population is a key ingredient of the X-ray background synthesis models and is needed to reproduce its shape, a complete census of obscured AGN is still missing. Here we test the selection of obscured sources among the local 12-micron sample of Seyfert galaxies. Our selection is based on a difference up to three orders of magnitude in the ratio between the AGN bolometric luminosity, derived from the spectral energy distribution (SED) decomposition, and the same quantity obtained by the published XMM-Newton 2-10 keV luminosity. The selected sources are UGC05101, NGC1194 and NGC3079 for which the available X-ray wide bandpass, from Chandra and XMM-Newton plus NuSTAR data, extending to energies up to ~30-45 keV, allows us an accurate determination of the column density, and hence of the true intrinsic power. The newly derived NH values clearly indicate heavy obscuration (about 1.2, 2.1 and 2.4 x10^{24} cm-2 for UGC05101, NGC1194 and NGC3079, respectively) and are consistent with the prominent silicate absorption feature observed in the Spitzer-IRS spectra of these sources (at 9.7 micron rest frame). We finally checked that the resulting X-ray luminosities in the 2-10 keV band are in good agreement with those derived from the mid-IR band through empirical L_MIR-L_X relations.Comment: 14 pages, 6 figures, accepted for publication in MNRA

New national and regional Annex I Habitat records: from # 21 to #25

New Italian data on the distribution of the Annex I Habitats 3170*, 6110*, 91E0*, 9320, 9330 are reported in this contribution. Specifically, one new occurrence in Natura 2000 sites is presented and six new cells are added in the European Environment Agency 10 km × 10 km reference grid. The new data refer to the Italian administrative regions of Sardinia, Sicily and Umbria

A mutation screening of oncogenes, tumor suppressor gene TP53 and nuclear encoded mitochondrial complex I genes in oncocytic thyroid tumors.

Background: Thyroid neoplasias with oncocytic features represent a specific phenotype in non-medullary thyroid cancer, reflecting the unique biological phenomenon of mitochondrial hyperplasia in the cytoplasm. Oncocytic thyroid cells are characterized by a prominent eosinophilia (or oxyphilia) caused by mitochondrial abundance. Although disruptive mutations in the mitochondrial DNA (mtDNA) are the most significant hallmark of such tumors, oncocytomas may be envisioned as heterogeneous neoplasms, characterized by multiple nuclear and mitochondrial gene lesions. We investigated the nuclear mutational profile of oncocytic tumors to pinpoint the mutations that may trigger the early oncogenic hit. Methods: Total DNA was extracted from paraffin-embedded tissues from 45 biopsies of oncocytic tumors. High-resolution melting was used for mutation screening of mitochondrial complex I subunits genes. Specific nuclear rearrangements were investigated by RT-PCR (RET/PTC) or on isolated nuclei by interphase FISH (PAX8/PPARγ). Recurrent point mutations were analyzed by direct sequencing. Results: In our oncocytic tumor samples, we identified rare TP53 mutations. The series of analyzed cases did not include poorly- or undifferentiated thyroid carcinomas, and none of the TP53 mutated cases had significant mitotic activity or high-grade features. Thus, the presence of disruptive TP53 mutations was completely unexpected. In addition, novel mutations in nuclear-encoded complex I genes were identified. Conclusions: These findings suggest that nuclear genetic lesions altering the bioenergetics competence of thyroid cells may give rise to an aberrant mitochondria-centered compensatory mechanism and ultimately to the oncocytic phenotype. Keywords: Oncocytic carcinoma, Nuclear mitochondrial complex I subunits, Oncogene mutation analysi

Focusing on the role of abiotic and biotic drivers on cross-taxon congruence

Diversity patterns can show congruence across taxonomic groups. Consistent diversity patterns allow the identification of indicator surrogates potentially representative of unobserved taxa or the broader biodiversity patterns. However, the effective use of biodiversity surrogates depends on underlying mechanisms driving the strength of the relationship among taxonomic groups. Here, we explored congruence patterns in community composition among taxa occupying different trophic levels, accounting for abiotic and biotic factors: vascular plants and six groups of ground-dwelling arthropods (pseudoscorpions, spiders, darkling beetles, rove beetles, ground beetles and ants) were chosen as potential indicator surrogates. We evaluated the cross-taxon relationships using Mantel test; subsequently, we investigated if these relationships could partially depend on abiotic drivers, using partial Mantel tests; then, we evaluated the partial contributions of abiotic and biotic drivers in explaining these relationships through a series of variation partitioning analyses. Our results showed that a consistent cross-taxon congruence pattern was evident across almost all group pairs: pseudoscorpions, spiders, ground beetles and vascular plants showed the largest number of significant correlations with other taxa. Environmental gradients resulted as drivers of cross-taxon congruence, shaping composition patterns. However, they were not the only ones. Biotic drivers account for part of cross-taxon congruence among vascular plants and arthropod predators (i.e., pseudoscorpions and spiders, but also ground beetles), as well as among taxa at high trophic levels. Almost all strictly predatory taxa, known as biological control agents, emerged as the best predictors of plant community composition even when the role of environmental factors was considered. Spiders/ants and spiders/ground beetles showed close relationships and congruent composition patterns, irrespective of environmental parameters. Relationships among taxa might be driven by several complex biotic interactions (e.g., non-trophic and trophic interactions, direct and indirect interactions). Bottom-up and top-down forces, consumptive and non-consumptive interactions may play a role in influencing the community composition of taxa and driving the observed relationships. Future studies should broaden knowledge about the role of these forces and interactions in determining the congruence across taxa. The multi-trophic perspective in cross-taxon studies can be promising for identifying biodiversity surrogates and their application in conservation planning

Analysis of the NGXO Telescope X-Ray Hartmann Data

Next Generation X-Ray Optics (NGXO) team at the Goddard Space Flight Center (GSFC) has been developing a new silicon-based grazing incidence mirror technology for future high resolution x-ray astronomical missions. Recently, the GSFC team completed the construction of first few mirror modules that contain one pair of mirrors. One of the mirror pairs was tested in GSFC 600-m long beamline facility and Panter (Neuried, Germay) 120-m long x-ray beamline facility. Both full aperture x-ray tests, Hartmann tests, and focal plane sweeps were completed. In this paper we present the data analysis process and compare the results from our models to measured x-ray centroid data, x-ray performance data, and out of focus images of the mirror pair

Genetic Basis of Nonsyndromic Sensorineural Hearing Loss in the Sub-Saharan African Island Population of São Tomé and Príncipe: The Role of the DFNB1 Locus?

Hearing loss (HL) is a common condition with both genetic and environmental causes, and it greatly impacts global health. The prevalence of HL is reportedly higher in developing countries such as the Sub-Saharan African island of São Tomé and Príncipe, where the deaf community is estimated to be less than 1% of the population. We investigated the role of the DFNB1 locus (GJB2 and GJB6 genes) in the etiology of nonsyndromic sensorineural hearing loss (NSSHL) in São Tomé and Príncipe. A sample of 316 individuals, comprising 136 NSSHL patients (92 bilateral, 44 unilateral) and 180 controls, underwent a clinical and audiological examination. Sequencing of the GJB2 coding region and testing for the (GJB6-D13S1830) and del(GJB6-D13S1854) GJB6 deletions were performed. A total of 311 out of 316 individuals were successfully analyzed regarding the GJB2 and GJB6 genetic variations, respectively. The frequency of the GJB2 coding mutations in patients and controls was low. Some of those coding mutations are the most commonly found in Eurasian and Mediterranean populations and have also been identified in Portugal. None of the GJB6 deletions was present. The presence of certain coding variants in São Tomé and Príncipe suggests a non-Sub-Saharan genetic influx and supports the previously reported genetic influx from European (mainly Portuguese) ancestors. In summary, DFNB1 locus does not appear to be a major contributor to NSSHL in São Tomé and Príncipe. However, the presence of both pathogenic and likely pathogenic mutations in GJB2 suggests that GJB2-related NSSHL might still occur in this population, warranting further research on GJB2 testing in NSSHL cases

New national and regional Annex I Habitat records: From #37 to #44

In this contribution, Italian new data concerning the distribution of the Annex I Habitats 3150, 3170*, 3260, 4090, 91L0, 91M0, 9340 are reported. In detail, 20 new occurrences in Natura 2000 sites are presented and 30 new cells are added in the EEA 10 km × 10 km reference grid. The new data refer to the Italian administrative regions of Campania, Lazio, Sardinia, Sicily, Tuscany, and Umbria