1,368 research outputs found
Detection of genetic prognostic markers in uveal melanoma biopsies using fluorescence in situ hybridization
Detection of genetic prognostic markers in uveal melanoma biopsies using fluorescence in situ hybridization
Modular Design via Multiple Anion Chemistry of the High Mobility van der Waals Semiconductor Bi₄O₄SeCl₂
Making new van der Waals materials with electronic or magnetic functionality is a chemical design challenge for the development of two-dimensional nanoelectronic and energy conversion devices. We present the synthesis and properties of the van der Waals material Bi4O4SeCl2, which is a 1:1 superlattice of the structural units present in the van der Waals insulator BiOCl and the three-dimensionally connected semiconductor Bi2O2Se. The presence of three anions gives the new structure both the bridging selenide anion sites that connect pairs of Bi2O2 layers in Bi2O2Se and the terminal chloride sites that produce the van der Waals gap in BiOCl. This retains the electronic properties of Bi2O2Se while reducing the dimensionality of the bonding network connecting the Bi2O2Se units to allow exfoliation of Bi4O4SeCl2 to 1.4 nm height. The superlattice structure is stabilized by the configurational entropy of anion disorder across the terminal and bridging sites. The reduction in connective dimensionality with retention of electronic functionality stems from the expanded anion compositional diversity
The simplest supramolecular helix
Diethylamine is the smallest and simplest molecule that features a supramolecular helix as its lowest energy aggregate.</p
First Person Experience of Body Transfer in Virtual Reality
Background: Altering the normal association between touch and its visual correlate can result in the illusory perception of a fake limb as part of our own body. Thus, when touch is seen to be applied to a rubber hand while felt synchronously on the corresponding hidden real hand, an illusion of ownership of the rubber hand usually occurs. The illusion has also been demonstrated using visuomotor correlation between the movements of the hidden real hand and the seen fake hand. This type of paradigm has been used with respect to the whole body generating out-of-the-body and body substitution illusions. However, such studies have only ever manipulated a single factor and although they used a form of virtual reality have not exploited the power of immersive virtual reality (IVR) to produce radical transformations in body ownership.Principal Findings: Here we show that a first person perspective of a life-sized virtual human female body that appears to substitute the male subjects' own bodies was sufficient to generate a body transfer illusion. This was demonstrated subjectively by questionnaire and physiologically through heart-rate deceleration in response to a threat to the virtual body. This finding is in contrast to earlier experimental studies that assume visuotactile synchrony to be the critical contributory factor in ownership illusions. Our finding was possible because IVR allowed us to use a novel experimental design for this type of problem with three independent binary factors: (i) perspective position (first or third), (ii) synchronous or asynchronous mirror reflections and (iii) synchrony or asynchrony between felt and seen touch.Conclusions: The results support the notion that bottom-up perceptual mechanisms can temporarily override top down knowledge resulting in a radical illusion of transfer of body ownership. The research also illustrates immersive virtual reality as a powerful tool in the study of body representation and experience, since it supports experimental manipulations that would otherwise be infeasible, with the technology being mature enough to represent human bodies and their motion
What traits are carried on mobile genetic elements, and why?
Although similar to any other organism, prokaryotes can transfer genes vertically from mother cell to daughter cell, they can also exchange certain genes horizontally. Genes can move within and between genomes at fast rates because of mobile genetic elements (MGEs). Although mobile elements are fundamentally self-interested entities, and thus replicate for their own gain, they frequently carry genes beneficial for their hosts and/or the neighbours of their hosts. Many genes that are carried by mobile elements code for traits that are expressed outside of the cell. Such traits are involved in bacterial sociality, such as the production of public goods, which benefit a cell's neighbours, or the production of bacteriocins, which harm a cell's neighbours. In this study we review the patterns that are emerging in the types of genes carried by mobile elements, and discuss the evolutionary and ecological conditions under which mobile elements evolve to carry their peculiar mix of parasitic, beneficial and cooperative genes
Anthropogenic habitat disturbance and food availability affect the abundance of an endangered primate: a regional approach
Anthropogenic habitat disturbances are causing large-scale declines in animal abundance. For many species, information on the drivers of decline is lacking or restricted to single sites, despite calls for regional approaches. In this study, we determined the effect of different types of habitat disturbance (natural or anthropogenic) and ecological factors on Geoffroy’s spider monkey (Ateles geoffroyi) abundance using a regional approach. We selected this study species because of its high degree of social flexibility and its endangered status. We surveyed 4 sites in the Yucatan Peninsula and recorded the number of individual monkeys encountered along 72 line-transect segments each measuring 500 m. Habitat disturbance variables were obtained from open-access databases and included distance to roads, presence and number of hurricanes, forest loss, and presence of forest fires. Ecological factors were based on data collected during vegetation surveys and included number and basal area of feeding tree species, and canopy height. We ran generalized linear mixed models and found that monkey abundance was negatively affected by forest loss but positively affected by the basal area of feeding trees. We, therefore, suggest that a combination of anthropogenic and ecological factors affects spider monkey abundance. Spider monkey’s high degree of social flexibility may be a mechanism allowing them to adjust to changes in their environment when canopy connectivity is not lost. Our results provide policy and conservation decision makers with key information to develop regional conservation plans. Additionally, our methods can be used to identify the factors that affect the abundance of other mammal species. © 2020, Deutsche Gesellschaft für Säugetierkunde
Discussion on 'Tectonic and environmental controls on Palaeozoic fluvial environments: reassessing the impacts of early land plants on sedimentation'. Journal of the Geological Society, https://doi.org/10.1144/jgs2016-063
The first-order importance of tectonic and environmental controls for terrigenous sediment supply has rarely been questioned, but the role of vegetation in the modification of ancient alluvial signatures has been observed since the mid-20th century (Vogt 1941). Studies of sparsely vegetated rivers (Schumm 1968) and alluvial stratigraphic variation (Cotter 1978; Davies & Gibling 2010) led to observations of (1) plant modulation of alluvial signatures and (2) Palaeozoic facies shifts (PFS): unidirectional changes to facies diversity and frequency, in stratigraphic alliance with the plant fossil record. One PFS is the Siluro-Devonian appearance of mud-rich, architecturally complex alluvium, traditionally ascribed to meandering rivers, and sedimentologically distinct from pre-vegetation strata (Davies & Gibling 2010; Long 2011). Using selected secondary data, Santos et al. (2017) dispute the correlation of these observations using three key points, as follows. (1) The mid-Palaeozoic was typified by orogenic assembly of low-gradient equatorial continents and elevated sea-level, which led to tropical weathering (abundant fine sediment) and extensive alluvial plains. This drove the PFS by promoting river meandering independently of vegetation. (2) Meandering does not require vegetation; this is shown by examples in Precambrian deposits, on other planets, and in ‘non-vegetated’ deserts. Meandering rivers were more abundant than the pre-vegetation rock record suggests, owing to selective bypass and deflation of fine material. (3) Early Siluro-Devonian (meaning Ludlow–Early Devonian) land plants were too small, their biomass and cover too limited, and their wetland habitat too narrow to have stabilized meandering channels, influencing landscape little more than earlier microbial communities. We contest the conclusions and method of the paper, and deal with each point in turn
Physiotherapy students' perspectives of online e-learning for interdisciplinary management of chronic health conditions: A qualitative study
© 2016 Gardner et al. Background: To qualitatively explore physiotherapy students' perceptions of online e-learning for chronic disease management using a previously developed, innovative and interactive, evidence-based, e-learning package: Rheumatoid Arthritis for Physiotherapists e-Learning (RAP-eL). Methods: Physiotherapy students participated in three focus groups in Perth, Western Australia. Purposive sampling was employed to ensure maximum heterogeneity across age, gender and educational background. To explore students' perspectives on the advantages and disadvantages of online e-learning, ways to enhance e-learning, and information/learning gaps in relation to interdisciplinary management of chronic health conditions, a semi-structured interview schedule was developed. Verbatim transcripts were analysed using inductive methods within a grounded theory approach to derive key themes. Results: Twenty-three students (78 % female; 39 % with previous tertiary qualification) of mean (SD) age 23 (3.6) years participated. Students expressed a preference for a combination of both online e-learning and lecture-style learning formats for chronic disease management, citing flexibility to work at one's own pace and time, and access to comprehensive information as advantages of e-learning learning. Personal interaction and ability to clarify information immediately were considered advantages of lecture-style formats. Perceived knowledge gaps included practical application of interdisciplinary approaches to chronic disease management and developing and implementing physiotherapy management plans for people with chronic health conditions. Conclusions: Physiotherapy students preferred multi-modal and blended formats for learning about chronic disease management. This study highlights the need for further development of practically-oriented knowledge and skills related to interdisciplinary care for people with chronic conditions among physiotherapy students. While RAP-eL focuses on rheumatoid arthritis, the principles of learning apply to the broader context of chronic disease management
A mathematical and computational review of Hartree-Fock SCF methods in Quantum Chemistry
We present here a review of the fundamental topics of Hartree-Fock theory in
Quantum Chemistry. From the molecular Hamiltonian, using and discussing the
Born-Oppenheimer approximation, we arrive to the Hartree and Hartree-Fock
equations for the electronic problem. Special emphasis is placed in the most
relevant mathematical aspects of the theoretical derivation of the final
equations, as well as in the results regarding the existence and uniqueness of
their solutions. All Hartree-Fock versions with different spin restrictions are
systematically extracted from the general case, thus providing a unifying
framework. Then, the discretization of the one-electron orbitals space is
reviewed and the Roothaan-Hall formalism introduced. This leads to a exposition
of the basic underlying concepts related to the construction and selection of
Gaussian basis sets, focusing in algorithmic efficiency issues. Finally, we
close the review with a section in which the most relevant modern developments
(specially those related to the design of linear-scaling methods) are commented
and linked to the issues discussed. The whole work is intentionally
introductory and rather self-contained, so that it may be useful for non
experts that aim to use quantum chemical methods in interdisciplinary
applications. Moreover, much material that is found scattered in the literature
has been put together here to facilitate comprehension and to serve as a handy
reference.Comment: 64 pages, 3 figures, tMPH2e.cls style file, doublesp, mathbbol and
subeqn package
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