2,801 research outputs found

    Bayesian P-Splines to investigate the impact of covariates on Multiple Sclerosis clinical course

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    This paper aims at proposing suitable statistical tools to address heterogeneity in repeated measures, within a Multiple Sclerosis (MS) longitudinal study. Indeed, due to unobservable sources of heterogeneity, modelling the effect of covariates on MS severity evolves as a very difficult feature. Bayesian P-Splines are suggested for modelling non linear smooth effects of covariates within generalized additive models. Thus, based on a pooled MS data set, we show how extending Bayesian P-splines to mixed effects models (Lang and Brezger, 2001), represents an attractive statistical approach to investigate the role of prognostic factors in affecting individual change in disability

    Graphical chain models for the analysis of complex genetic diseases: an application to hypertension

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    A crucial task in modern genetic medicine is the understanding of complex genetic diseases. The main complicating features are that a combination of genetic and environmental risk factors is involved, and the phenotype of interest may be complex. Traditional statistical techniques based on lod-scores fail when the disease is no longer monogenic and the underlying disease transmission model is not defined. Different kinds of association tests have been proved to be an appropriate and powerful statistical tool to detect a candidate gene for a complex disorder. However, statistical techniques able to investigate direct and indirect influences among phenotypes, genotypes and environmental risk factors, are required to analyse the association structure of complex diseases. In this paper we propose graphical models as a natural tool to analyse the multifactorial structure of complex genetic diseases. An application of this model to primary hypertension data set is illustrated

    Dimensional Analysis and Stage-Discharge Relationships for Vegetated Weirs

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    The deduction of the weir flow stage-discharge relationship is a hydraulic problem generally solved by energy considerations and using the discharge coefficient to correct the gap between theoretical results and experimental measurements. In this context, the dimensional analysis represents an alternative to find simple and reliable equations to obtain the rating curve. In this study, the outflow process of vegetated weirs is investigated applying the pi-Theorem of dimensional analysis and the incomplete self-similarity theory. The aim of this paper is to propose a new theoretically-based stage-discharge relationship, and test its applicability by measurements recently published in the literature. The results showed that the errors in discharge estimate obtained by the proposed stage-discharge relationship are always less than or equal to +/- 10% and less than or equal to +/- 5% for 97-100% of cases. The main advantage of the proposed relationships is providing a single stage-discharge relationship, which has better performances than the equations reported in the literature and excludes the use of discharge coefficient

    Flow discharge measurement by a linear width contraction device

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    In this paper, the outflow process of a linear width contraction device for a free-flow condition is modeled using the dimensional analysis and the incomplete self-similarity condition. The proposed theoretical stage-discharge relationship is tested using measurements available in the literature. The proposed power stage-discharge equation is characterized by a value of the exponent close to 2 and a coefficient depending on the angle of the device sides with the channel bank. The proposed flume is characterized by simple construction, easy installation, low cost, and a good accuracy of the measured discharge (errors in the estimate ranging from - 3.84 to 1.9%). The deduced stage-discharge equation is characterized by errors in the estimate of discharge lower than or equal to & PLUSMN; 3% for 93.7% of the investigated cases. The main result of this paper is a stage-discharge relationship giving an accurate estimate of discharge but, at the same time, having the advantage of working regardless of the discharge coefficient estimate

    Penalized inference of the hematopoietic cell differentiation network via high-dimensional clonal tracking

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    Abstract Background During their lifespan, stem- or progenitor cells have the ability to differentiate into more committed cell lineages. Understanding this process can be key in treating certain diseases. However, up until now only limited information about the cell differentiation process is known. Aim The goal of this paper is to present a statistical framework able to describe the cell differentiation process at the single clone level and to provide a corresponding inferential procedure for parameters estimation and structure reconstruction of the differentiation network. Approach We propose a multidimensional, continuous-time Markov model with density-dependent transition probabilities linear in sub-population sizes and rates. The inferential procedure is based on an iterative calculation of approximated solutions for two systems of ordinary differential equations, describing process moments evolution over time, that are analytically derived from the process' master equation. Network sparsity is induced by adding a SCAD-based penalization term in the generalized least squares objective function. Results The methods proposed here have been tested by means of a simulation study and then applied to a data set derived from a gene therapy clinical trial, in order to investigate hematopoiesis in humans, in-vivo. The hematopoietic structure estimated contradicts the classical dichotomy theory of cell differentiation and supports a novel myeloid-based model recently proposed in the literature

    Conservative treatment for hypervascularised placental polyp with secondary haemoperitoneum: A case report

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    Objective: We describe the first case to our knowledge of hypervascularised placental polyp (HPP) presenting with acute pelvic pain and hemoperitoneum. Case Report: A 33 years-old woman with a history of medical abortion three months earlier came to our attention complaining acute pelvic pain and vaginal bleeding. Transvaginal (TV) and transabdominal (TA) ultrasound (US) demonstrated a highly vascular intrauterine lesion and intra-abdominal free fluid consistent with a diagnosis of haemoperitoneum. Emergency laparoscopy yielded no intra-abdominal bleeding and was followed by bilateral selective embolization of the uterine arteries due to persistent vaginal bleeding. Hysteroscopy and pathology findings were consistent with a final diagnosis of HPP. Conclusion: HPP may occur months or years after pregnancy or abortion and the clinical picture of abnormal vaginal bleeding associated with acute abdominal pain and haemoperitoneum should warrant to consider HPP among the differential diagnosis. Clinical and imaging findings need to be considered when planning the conservative management of HPP. Our experience suggests that uterine artery embolization is a safe and effective for the conservative treatment of highly vascularized HPP. (www. actabiomedica.it)

    Specific Argonautes Selectively Bind Small RNAs Derived from Potato Spindle Tuber Viroid and Attenuate Viroid Accumulation In Vivo

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    Research in the laboratory of R. F. is currently funded by grant BFU2011-28443 from the Ministerio de Economia y Competitividad (MINECO, Spain). S.M. has been supported by a fellowship and a pre-doctoral contract from MINECO. Research in the laboratory of B.N. and F.D.S. has been funded by a dedicated grant from the Ministero dell'Economia e Finanze Italiano to the CNR (CISIA; Legge no. 191/2009). Research in the laboratory of J.C.C. was supported by grants from the National Science Foundation (MCB-0956526 and MCB-1231726) and the National Institutes of Health (AI043288)Minoia, S.; Carbonell, A.; Di Serio, F.; Gisel, A.; Carrinton, JC.; Navarro, B.; Flores Pedauye, R. (2014). Specific Argonautes Selectively Bind Small RNAs Derived from Potato Spindle Tuber Viroid and Attenuate Viroid Accumulation In Vivo. Journal of Virology. 88(20):11933-11945. https://doi.org/10.1128/JVI.01404-14S11933119458820Flores, R., Hernández, C., Alba, A. E. M. de, Daròs, J.-A., & Serio, F. D. (2005). 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ARGONAUTE4 Control of Locus-Specific siRNA Accumulation and DNA and Histone Methylation. Science, 299(5607), 716-719. doi:10.1126/science.1079695Havecker, E. R., Wallbridge, L. M., Hardcastle, T. J., Bush, M. S., Kelly, K. A., Dunn, R. M., … Baulcombe, D. C. (2010). TheArabidopsisRNA-Directed DNA Methylation Argonautes Functionally Diverge Based on Their Expression and Interaction with Target Loci  . The Plant Cell, 22(2), 321-334. doi:10.1105/tpc.109.072199Qi, Y., He, X., Wang, X.-J., Kohany, O., Jurka, J., & Hannon, G. J. (2006). Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation. Nature, 443(7114), 1008-1012. doi:10.1038/nature05198Mallory, A. C., Hinze, A., Tucker, M. R., Bouché, N., Gasciolli, V., Elmayan, T., … Laux, T. (2009). Redundant and Specific Roles of the ARGONAUTE Proteins AGO1 and ZLL in Development and Small RNA-Directed Gene Silencing. 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    Niobia supported on silica as a catalyst for Biodiesel production from waste oil

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    AbstractThe activity and stability of niobia supported on silica catalyst have been tested in continuous micro-pilot reactors, for biodiesel production starting from acid vegetable oils. A catalyst was prepared by the impregnation of silica pellets with a loading of 12% of Nb and was extensively characterized. The activity of this catalyst in both esterification and transesterification was tested in a continuous micro-pilot laboratory plant in which acid oil was fed (FFA 10% w/w) at a temperature of 220°C and at a pressure of 60 bar. The niobia based catalyst resulted in a very active catalyst in both esterification (FFA conversion = 95-90%) and transesterification reactions (FAME yield = 80-90%), and the activity remained quite constant for more than 100 h on stream. Notwithstanding this stability, a non-negligible leaching phenomena has been detected, in the case of long-time continuous runs, as the Nb concentration on the spent catalyst resulted lower than that on the fresh one. The obtained result confirms that the leaching of the active specie is one of the most strong problem in heterogeneous catalysis for biodiesel production

    Retrieval of foreign-broadened water vapor continuum coefficients from emitted spectral radiance in the H2O rotational band from 240 to 590 cm −1

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    The paper presents a novel methodology to retrieve the foreign-broadened water vapor continuum absorption coefficients in the spectral range 240 to 590 cm−1 and is the first estimation of the continuum coefficient at wave numbers smaller than 400 cm−1 under atmospheric conditions. The derivation has been accomplished by processing a suitable set of atmospheric emitted spectral radiance observations obtained during the March 2007 Alps campaign of the ECOWAR project (Earth COoling by WAter vapor Radiation). It is shown that, in the range 450 to 600 cm−1, our findings are in good agreement with the widely used Mlawer, Tobin-Clough, Kneizys-Davies (MT_CKD) continuum. Below 450 cm−1 however the MT_CKD model overestimates the magnitude of the continuum coefficient.Published15816-158331.8. Osservazioni di geofisica ambientaleJCR Journalreserve
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