2,250 research outputs found

    Profiles of electrostatic potential across the water-vapor, ice-vapor and ice-water interfaces

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    Ice-water, water-vapor interfaces and ice surface are studied by molecular dynamics simulations with the SPC/E model of water molecules having the purpose to estimate the profiles of electrostatic potential across the interfaces. We have proposed a methodology for calculating the profiles of electrostatic potential based on a trial particle, which showed good agreement for the case of electrostatic potential profile of the water-vapor interface of TIP4P model calculated in another way. The measured profile of electrostatic potential for the pure ice-water interface decreases towards the liquid bulk region, which is in agreement with simulations of preferential direction of motion of Li+^{+} and F^{-} solute ions at the liquid side of the ice-water interface. These results are discussed in connection with the Workman-Reynolds effect.Comment: 7 pages, 5 figure

    School violence, school differences and school discourses

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    This article highlights one strand of a study which investigated the concept of the violenceresilient school. In six inner-city secondary schools, data on violent incidents in school and violent crime in the neighbourhood were gathered, and compared with school practices to minimise violence, accessed through interviews. Some degree of association between the patterns of behaviour and school practices was found: schools with a wider range of wellconnected practices seemed to have less difficult behaviour. Interviews also showed that the different schools had different organisational discourses for construing school violence, its possible causes and the possible solutions. Differences in practices are best understood in connection with differences in these discourses. Some of the features of school discourses are outlined, including their range, their core metaphor and their silences. We suggest that organisational discourse is an important concept in explaining school effects and school differences, and that improvement attempts could have clearer regard to this concept

    A new procedure for microarray experiments to account for experimental noise and the uncertainty of probe response

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    Although microarrays are routine analysis tools in biomedical research, theystill yield noisy output that often requires experimental confirmation. Manystudies have aimed at optimizing probe design and statistical analysis totackle this problem. However, less emphasis has been placed on controlling thenoise inherent to the experimental approach. To address this problem, weinvestigate here a procedure that controls for such experimental variance andcombine it with an assessment of probe performance. Two custom arrays were usedto evaluate the procedure: one based on 25mer probes from an Affymetrix designand the other based on 60mer probes from an Agilent design. To assessexperimental variance, all probes were replicated ten times. To assess probeperformance, the probes were calibrated using a dilution series of targetmolecules and the signal response was fitted to an absorption model. We foundthat significant variance of the signal could be controlled by averaging acrossprobes and removing probes that are nonresponsive. Thus, a more reliable signalcould be obtained using our procedure than conventional approaches. We suggestthat once an array is properly calibrated, absolute quantification of signalsbecomes straight forward, alleviating the need for normalization and referencehybridizations.<br

    A Revised Design for Microarray Experiments to Account for Experimental Noise and Uncertainty of Probe Response

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    Background Although microarrays are analysis tools in biomedical research, they are known to yield noisy output that usually requires experimental confirmation. To tackle this problem, many studies have developed rules for optimizing probe design and devised complex statistical tools to analyze the output. However, less emphasis has been placed on systematically identifying the noise component as part of the experimental procedure. One source of noise is the variance in probe binding, which can be assessed by replicating array probes. The second source is poor probe performance, which can be assessed by calibrating the array based on a dilution series of target molecules. Using model experiments for copy number variation and gene expression measurements, we investigate here a revised design for microarray experiments that addresses both of these sources of variance. Results Two custom arrays were used to evaluate the revised design: one based on 25 mer probes from an Affymetrix design and the other based on 60 mer probes from an Agilent design. To assess experimental variance in probe binding, all probes were replicated ten times. To assess probe performance, the probes were calibrated using a dilution series of target molecules and the signal response was fitted to an adsorption model. We found that significant variance of the signal could be controlled by averaging across probes and removing probes that are nonresponsive or poorly responsive in the calibration experiment. Taking this into account, one can obtain a more reliable signal with the added option of obtaining absolute rather than relative measurements. Conclusion The assessment of technical variance within the experiments, combined with the calibration of probes allows to remove poorly responding probes and yields more reliable signals for the remaining ones. Once an array is properly calibrated, absolute quantification of signals becomes straight forward, alleviating the need for normalization and reference hybridizations

    Cerebral Autoregulation Is Disrupted Following a Season of Contact Sports Participation

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    Repetitive subconcussive head impacts across a season of contact sports participation are associated with a number of deficits in brain function. To date, no research has investigated the effect of such head impact exposure on dynamic cerebral autoregulation (dCA). To address this issue, 179 elite, junior-level (age 19.6 ± 1.5 years) contact sport (ice hockey, American football) athletes were recruited for pre-season testing. Fifty-two non-concussed athletes returned for post-season testing. Fifteen non-contact sport athletes (age 20.4 ± 2.2) also completed pre- and postseason testing. dCA was assessed via recordings of beat-by-beat mean arterial pressure (MAP) and middle cerebral artery blood velocity (MCAv) using finger photoplethysmography and transcranial Doppler ultrasound, respectively, during repetitive squat-stand maneuvers at 0.05 and 0.10 Hz. Transfer function analysis was used to determine Coherence (correlation), Gain (response amplitude), and Phase (response latency) of the MAP-MCAv relationship. Results showed that in contact sport athletes, Phase was reduced (p = 0.027) and Gain increased (p &lt; 0.001) at post-season compared to pre-season during the 0.10 Hz squat-stand maneuvers, indicating cerebral autoregulatory impairment in both the latency and magnitude of the response. Changes in Phase were greater in athletes experiencing higher numbers and severity of head impacts. By contrast, no changes in dCA were observed in non-contact sport controls. Taken together, these results demonstrate that repetitive subconcussive head impacts occurring across a season of contact sports participation are associated with exposure-dependent impairments in the cerebrovascular pressure-buffering system capacity. It is unknown how long these deficits persist or if they accumulate year-over-year

    High-Resolution Thermal-Wave Imaging Using the Photoinductive Effect

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    Photoinductive imaging is a newly devised technique for photothermal imaging based on eddy-current detection of thermal waves [1]. Thermal waves produce a localized modulation in the specimen’s electrical conductivity, which can be detected by its effect on the impedance of a nearby eddy-current coil. This photoinductive effect can be used to image surface or near-surface cracks, voids, or inclusions. The method is limited in practice to conducting specimens, but it can be used to inspect thin, nonconducting coatings on metallic substrates, as we demonstrate here. One promising feature of photoinductive imaging is its potential for high resolution, especially when compared with the resolution possible with eddy-current probes alone. The objective of the present study was to exploit the high resolution capability inherent in this technique by adapting a photoinductive sensor developed for a fiber optic probe [2] to an existing photoacoustic microscope. In this paper we explore using this technique for typical applications in nondestructive evaluatio

    Dynamic properties of liquid Ni revisited

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    Liquid Ni has previously been studied by different approaches such as molecular dynamics simulations and experimental techniques including inelastic neutron and X-ray scattering. Although some puzzling results, such as the shape of the sound dispersion curve for q ≤ 1.0 Å−1, have already been sorted out, there still persist some discrepancies, among different studies, for greater q-values. We have performed ab initio simulation calculations which show how those differences can be reconciled. Moreover, we have found that the transverse current spectral functions have some features which, so far, had previously been shown by high pressure liquid metals

    Integral equations for simple fluids in a general reference functional approach

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    The integral equations for the correlation functions of an inhomogeneous fluid mixture are derived using a functional Taylor expansion of the free energy around an inhomogeneous equilibrium distribution. The system of equations is closed by the introduction of a reference functional for the correlations beyond second order in the density difference from the equilibrium distribution. Explicit expressions are obtained for energies required to insert particles of the fluid mixture into the inhomogeneous system. The approach is illustrated by the determination of the equation of state of a simple, truncated Lennard--Jones fluid and the analysis of the behavior of this fluid near a hard wall. The wall--fluid integral equation exhibits complete drying and the corresponding coexisting densities are in good agreement with those obtained from the standard (Maxwell) construction applied to the bulk fluid. Self--consistency of the approach is examined by analyzing the virial/compressibility routes to the equation of state and the Gibbs--Duhem relation for the bulk fluid, and the contact density sum rule and the Gibbs adsorption equation for the hard wall problem. For the bulk fluid, we find good self--consistency for stable states outside the critical region. For the hard wall problem, the Gibbs adsorption equation is fulfilled very well near phase coexistence where the adsorption is large.For the contact density sum rule, we find some deviationsnear coexistence due to a slight disagreement between the coexisting density for the gas phase obtained from the Maxwell construction and from complete drying at the hard wall.Comment: 29 page

    Magnetism of small V clusters embedded in a Cu fcc matrix: an ab initio study

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    We present extensive first principles density functional theory (DFT) calculations dedicated to analyze the magnetic and electronic properties of small Vn_{n} clusters (n=1,2,3,4,5,6) embedded in a Cu fcc matrix. We consider different cluster structures such as: i) a single V impurity, ii) several V2_{2} dimers having different interatomic distance and varying local atomic environment, iii) V3_{3} and iv) V4_{4} clusters for which we assume compact as well as 2- and 1-dimensional atomic configurations and finally, in the case of the v) V5_{5} and vi) V6_{6} structures we consider a square pyramid and a square bipyramid together with linear arrays, respectively. In all cases, the V atoms are embedded as substitutional impurities in the Cu network. In general, and as in the free standing case, we have found that the V clusters tend to form compact atomic arrays within the cooper matrix. Our calculated non spin-polarized density of states at the V sites shows a complex peaked structure around the Fermi level that strongly changes as a function of both the interatomic distance and local atomic environment, a result that anticipates a non trivial magnetic behavior. In fact, our DFT calculations reveal, in each one of our clusters systems, the existence of different magnetic solutions (ferromagnetic, ferrimagnetic, and antiferromagnetic) with very small energy differences among them, a result that could lead to the existence of complex finite-temperature magnetic properties. Finally, we compare our results with recent experimental measurements.Comment: 7 pages and 4 figure
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