Metal and semimetal loadings in sediments and water from mangrove ecosystems: A preliminary assessment of anthropogenic enrichment in São Tomé island (central Africa)

Mangroves act as buffer areas for marine systems, providing a barrier to contamination from continental sources by retaining metal pollutants. This study evaluates metal and semimetal contamination in the water column and sediments of four mangroves located on the volcanic island of São Tomé. Several metals had a widespread distribution, with occasional high concentrations, linked to potential sources of contamination. However, the two smaller mangroves, located in the northern part of the island, tended to have high metal concentrations. Arsenic and chromium concentrations were notably concerning, particularly if we consider this is an isolated and non-industrialized island. This work highlights the need for further assessments and a better understanding of processes and implications of metal contamination in mangroves. This assumes a particular relevance in areas that have specific geochemical compositions (i.e., volcanic origin) and in developing countries, where people often rely directly and heavily on resources obtained from these ecosystems.info:eu-repo/semantics/publishedVersio

Modelling the habitat preferences of the NE-Atlantic Sea cucumber Holothuria forskali : demographics and abundance

This work was funded by the Operational Program Mar2020 MAR-02.01.01-FEAMP-0052 “Newcumber - Avanços para o cultivo sustentável de pepinos do mar”. This work was also supported by national funds through FCT - Fundação para a Ciência e a Tecnologia, I.P., within the scope of the projects (https://doi.org/10.54499/UIDB/04292/2020, and https://doi.org/10.54499/UIDB/00006/2020) and the Associate Laboratory ARNET (https://doi.org/10.54499/LA/P/0069/2020), A.C. Brito with the Scientific Stimulus Program – CEECIND/00095/2017, A.P. with the under the Scientific Employment Stimulus - Institutional Call - CEECINST/00051/2018 and Francisco Azevedo e Silva and João Trigo de Sousa through the individual grants (SFRH/BD/09563/2020 and SFRH/BDANA/02949/2023).Sea cucumbers' historical demand, together with the depletion of several traditional species in the market, has popularized new target species from new fishing grounds. Holothuria forskali is one of those emergent species in the trade market. However, it is a species for which there is no relevant information to allow sustainable stock management. Fundamental knowledge of the populations' structure and habitat preferences are key elements without which any measure is inconsequent. This work aims to fill that gap by modelling temporal and spatial patterns of abundance and demographic structure of this species in a NE-Atlantic area, as a function of environmental features. For a period of 15 months, nine regular sampling campaigns collected data on density, individual length, individual conditions of occurrence (e.g. sheltered, on sand, on algae cover) and environmental parameters (water column, sediment, substrate cover and type), using random transects throughout a costal rocky-reef, considering habitat heterogeneity and substrate types. To determine the species' habitat preferences Generalized Linear Models were used to model density and demographic structure of the species as a function of environmental conditions. The models revealed that the main drivers shaping the distribution of H. forskali are neither abiotic nor biotic parameters of the water column, but physical stressors, like current intensity and depth, and substrate type in a patchy distribution pattern. Estuarine conditions are generally avoided, although with a size-dependent opportunistic strategy. Larger individuals show temporal and spatial displacement patterns towards suitable reproductive conditions (pre-breeding aggregation) and favourable feeding grounds and smaller size-classes tend to aggregate in higher numbers in more stable environments. Sustainable sources for market supply, like aquaculture, are still a long way from commercial production. So, these results are fundamental to support effective conservation measures for stock management of H. forskaliPublisher PDFPeer reviewe

Allometric relationships to assess ontogenetic adaptative changes in three NE Atlantic commercial sea cucumbers (Echinodermata, Holothuroidea)

This study was financed by the Operational Program Mar2020 nº MAR-02.01.01-FEAMP-0052 “Newcumber—Avanços para o cultivo sustentável de pepinos-do-mar”. It received further financial support from Fundação para a Ciência e a Tecnologia with project UIDB/04292/2020; A.C. Brito and A. Pombo through the Scientific Employment Stimulus Programmes (CEECIND/00095/2017 and CEECINST/00051/2018); and Francisco Azevedo e Silva through the individual research Grant 2020.09563.BD; Also, T. A. Marques and C. Rocha thank partial support by CEAUL (funded by FCT—Fundação para a Ciência e a Tecnologia, Portugal, through the project UIDB/00006/2020).Holothuria arguinensis, Holothuria mammata and Holothuria forskali are three common sea cucumber species found in the NE Atlantic, traded in international markets and susceptible to capture. Allometric relationships reveal if the scaling relationships between biometric characters are proportional with growth, being a useful tool to understand species growth strategies. Allometric relationships of the three species were estimated and compared between them and with populations from different regions. These allometric relationships revealed that the three species have negative allometric growth. However, they have different growth strategies between them and reveal different regional intra-specific growth strategies when compared to other populations, suggesting ontogenetic adaptation as a consequence of external factors. PostprintPeer reviewe

Dissecting the sugarcane expressed sequence tag (SUCEST) database: unraveling flower-specific genes

There are almost 260,000 independent clones sequenced from the 5? end in the Sugarcane Expressed Sequence Tag (SUCEST) database, which have been obtained from 37 cDNA libraries prepared from different tissues. This large number of expressed sequence tags (ESTs) provides an opportunity, unprecedented in plants, to perform ?digital differential screening? on selected cDNA libraries. In general, the frequency of a particular EST correlates with transcript accumulation in the tissues from which the cDNA libraries were constructed, so it is possible to compare the whole transcriptome from different tissues using computer-assisted analysis of an EST database. In our research we analyzed sugarcane ESTs according to tissue expression and identified more than 1,000 putative flower-specific genes. The fact that using this technique we were able to identify sugarcane homologues of several genes previously described as pollen-specific justifies this method of assessing tissue specificity. In addition, ESTs similar to genes specific to reproductive organs were detected e.g. a sugarcane gene encoding a meiotic protein essential for assembly of the synaptonemal complex and normal synapsis. This approach also allowed the identification of many flower-specific anonymous sequences that are good candidates for being novel genes involved in plant reproduction. This paper describes the analysis of the gene expression levels of 24 EST clusters during flower development using a ?digital northern blot? constructed from direct EST counts made on the non-normalized sugarcane cDNA libraries.Existem quase 260.000 clones independentes, seqüenciados a partir da extremidade 5?, no banco de dados do SUCEST (Sugarcane Expressed Sequence Tag), os quais foram obtidos a partir de 37 bibliotecas de cDNA preparadas de diferentes tecidos. Este grande número de etiquetas de sequências expressas (ESTs) fornece uma oportunidade, sem precedentes em plantas, de realizar um ?digital differential screening? em bibliotecas de cDNA selecionadas. Geralmente, a frequência de um determinado EST está correlacionada ao acúmulo de transcritos nos tecidos dos quais as bibliotecas de cDNA foram construídas, e desta forma, é possível comparar o transcriptoma completo de diferentes tecidos, usando uma análise computacional de um banco de dados de ESTs. Em nossa pesquisa, analisamos os ESTs de cana-de-açúcar de acordo com sua expressão tecidual e identificamos mais de 1.000 putativos genes específicos de flor. O fato de que usando esta técnica fomos capazes de identificar homológos em cana-de-açúcar, de vários genes previamente descritos como específicos de pólen, sustenta este método de estimar especificidade tecidual. Além disto, ESTs com similaridade a genes específicos de órgãos reprodutivos foram revelados, como por exemplo, o gene que codifica uma proteína meiótica essencial para a montagem do complexo sinaptonêmico e sinapse normal. Esta abordagem também permitiu a identificação de muitas sequências anônimas, específicas de flor, que são boas candidatas para novos genes envolvidos com a reprodução de plantas. Este trabalho descreve a análise dos níveis de expressão gênica de 24 clusters de ESTs, durante o desenvolvimento floral, usando um ?northern blot digital? construído a partir da contagem direta dos ESTs das bibliotecas não-normalizadas de cDNAs de cana-de-açúcar.7784Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq

Entrapment of a Network of Domain Walls

We explore the idea of a network of defects to live inside a domain wall in models of three real scalar fields, engendering the Z_2 x Z_3 symmetry. The field that governs the Z_2 symmetry generates a domain wall, and entraps the hexagonal network formed by the three-junctions of the model of two scalar fields that describes the remaining Z_3 symmetry. If the host domain wall bends to the spherical form, in the thin wall approximation there may appear non-topological structures hosting networks that accept diverse patterns. If Z_3 is also broken, the model may generate a buckyball containing sixty junctions, a fullerene-like structure. Applications to cosmology are outlined.Comment: Revtex, 4 pages, 2 ps figures; version to appear in Phys. Rev. D, Rapid Communicatio