247 research outputs found
Barrier-controlled carrier transport in microcrystalline semiconducting materials: Description within a unified model
A recently developed model that unifies the ballistic and diffusive transport
mechanisms is applied in a theoretical study of carrier transport across
potential barriers at grain boundaries in microcrystalline semiconducting
materials. In the unified model, the conductance depends on the detailed
structure of the band edge profile and in a nonlinear way on the carrier mean
free path. Equilibrium band edge profiles are calculated within the trapping
model for samples made up of a linear chain of identical grains. Quantum
corrections allowing for tunneling are included in the calculation of electron
mobilities. The dependence of the mobilities on carrier mean free path, grain
length, number of grains, and temperature is examined, and appreciable
departures from the results of the thermionic-field-emission model are found.
Specifically, the unified model is applied in an analysis of Hall mobility data
for n-type microcrystalline Si thin films in the range of thermally activated
transport. Owing mainly to the effect of tunneling, potential barrier heights
derived from the data are substantially larger than the activation energies of
the Hall mobilities. The specific features of the unified model, however,
cannot be resolved within the rather large uncertainties of the analysis.Comment: REVTex, 19 pages, 9 figures; to appear in J. Appl. Phy
Interior of a Schwarzschild black hole revisited
The Schwarzschild solution has played a fundamental conceptual role in
general relativity, and beyond, for instance, regarding event horizons,
spacetime singularities and aspects of quantum field theory in curved
spacetimes. However, one still encounters the existence of misconceptions and a
certain ambiguity inherent in the Schwarzschild solution in the literature. By
taking into account the point of view of an observer in the interior of the
event horizon, one verifies that new conceptual difficulties arise. In this
work, besides providing a very brief pedagogical review, we further analyze the
interior Schwarzschild black hole solution. Firstly, by deducing the interior
metric by considering time-dependent metric coefficients, the interior region
is analyzed without the prejudices inherited from the exterior geometry. We
also pay close attention to several respective cosmological interpretations,
and briefly address some of the difficulties associated to spacetime
singularities. Secondly, we deduce the conserved quantities of null and
timelike geodesics, and discuss several particular cases in some detail.
Thirdly, we examine the Eddington-Finkelstein and Kruskal coordinates directly
from the interior solution. In concluding, it is important to emphasize that
the interior structure of realistic black holes has not been satisfactorily
determined, and is still open to considerable debate.Comment: 15 pages, 7 figures, Revtex4. V2: Version to appear in Foundations of
Physic
Mapping interactions with the chaperone network reveals factors that protect against tau aggregation.
A network of molecular chaperones is known to bind proteins ('clients') and balance their folding, function and turnover. However, it is often unclear which chaperones are critical for selective recognition of individual clients. It is also not clear why these key chaperones might fail in protein-aggregation diseases. Here, we utilized human microtubule-associated protein tau (MAPT or tau) as a model client to survey interactions between ~30 purified chaperones and ~20 disease-associated tau variants (~600 combinations). From this large-scale analysis, we identified human DnaJA2 as an unexpected, but potent, inhibitor of tau aggregation. DnaJA2 levels were correlated with tau pathology in human brains, supporting the idea that it is an important regulator of tau homeostasis. Of note, we found that some disease-associated tau variants were relatively immune to interactions with chaperones, suggesting a model in which avoiding physical recognition by chaperone networks may contribute to disease
PPR proteins - orchestrators of organelle RNA metabolism.
Pentatricopeptide repeat (PPR) proteins are important RNA regulators in chloroplasts and mitochondria, aiding in RNA editing, maturation, stabilisation or intron splicing, and in transcription and translation of organellar genes. In this review, we summarise all PPR proteins documented so far in plants and the green alga Chlamydomonas. By further analysis of the known target RNAs from Arabidopsis thaliana PPR proteins, we find that all organellar-encoded complexes are regulated by these proteins, although to differing extents. In particular, the orthologous complexes of NADH dehydrogenase (Complex I) in the mitochondria and NADH dehydrogenase-like (NDH) complex in the chloroplast were the most regulated, with respectively 60 and 28% of all characterised A. thaliana PPR proteins targeting their genes
Quantization of the interior Schwarzschild black hole
We study a Hamiltonian quantum formalism of a spherically symmetric
space-time which can be identified with the interior of a Schwarzschild black
hole. The phase space of this model is spanned by two dynamical variables and
their conjugate momenta. It is shown that the classical Lagrangian of the model
gives rise the interior metric of a Schwarzschild black hole. We also show that
the the mass of such a system is a Dirac observable and then by quantization of
the model by Wheeler-DeWitt approach and constructing suitable wave packets we
get the mass spectrum of the black hole.Comment: 12 pages, 1 figure, revised versio
Lesson from the Stoichiometry Determination of the Cohesin Complex: A Short Protease Mediated Elution Increases the Recovery from Cross-Linked Antibody-Conjugated Beads
Affinity purification of proteins using antibodies coupled to beads and subsequent mass spectrometric analysis has become a standard technique for the identification of protein complexes. With the recent transfer of the isotope dilution mass spectrometry principle (IDMS) to the field of proteomics, quantitative analysesssuch as the stoichiometry determination of protein complexesshave become achievable. Traditionally proteins were eluted from antibody-conjugated beads using glycine at low pH or using diluted acids such as HCl, TFA, or FA, but elution was often found to be incomplete. Using the cohesin complex and the anaphase promoting complex/cyclosome (APC/C) as examples, we show that a short 15-60 min predigestion with a protease such as LysC (modified on-bead digest termed protease elution) increases the elution efficiency 2- to 3-fold compared to standard acid elution protocols. While longer incubation periodssas performed in standard on-bead digestionsled to partial proteolysis of the cross-linked antibodies, no or only insignificant cleavage was observed after 15-60 min protease mediated elution. Using the protease elution method, we successfully determined the stoichiometry of the cohesin complex by absolute quantification of the four core subunits using LC-SRM analysis and 19 reference peptides generated with the EtEP strategy. Protease elution was 3-fold more efficient compared to HCl elution, but measurements using both elution techniques are in agreement with
A Computational Approach to Analyze the Mechanism of Action of the Kinase Inhibitor Bafetinib
Prediction of drug action in human cells is a major challenge in biomedical research. Additionally, there is strong interest in finding new applications for approved drugs and identifying potential side effects. We present a computational strategy to predict mechanisms, risks and potential new domains of drug treatment on the basis of target profiles acquired through chemical proteomics. Functional protein-protein interaction networks that share one biological function are constructed and their crosstalk with the drug is scored regarding function disruption. We apply this procedure to the target profile of the second-generation BCR-ABL inhibitor bafetinib which is in development for the treatment of imatinib-resistant chronic myeloid leukemia. Beside the well known effect on apoptosis, we propose potential treatment of lung cancer and IGF1R expressing blast crisis
Rationalising the role of Keratin 9 as a biomarker for Alzheimer’s disease
Keratin 9 was recently identified as an important component of a biomarker panel which demonstrated a high diagnostic accuracy (87%) for Alzheimer’s disease (AD). Understanding how a protein which is predominantly expressed in palmoplantar epidermis is implicated in AD may shed new light on the mechanisms underlying the disease. Here we use immunoassays to examine blood plasma expression patterns of Keratin 9 and its relationship to other AD-associated proteins. We correlate this with the use of an in silico analysis tool VisANT to elucidate possible pathways through which the involvement of Keratin 9 may take place. We identify possible links with Dickkopf-1, a negative regulator of the wnt pathway, and propose that the abnormal expression of Keratin 9 in AD blood and cerebrospinal fluid may be a result of blood brain barrier dysregulation and disruption of the ubiquitin proteasome system. Our findings suggest that dysregulated Keratin 9 expression is a consequence of AD pathology but, as it interacts with a broad range of proteins, it may have other, as yet uncharacterized, downstream effects which could contribute to AD onset and progression
The Maxwell Electromagnetic Equations and the Lorentz Type Force Derivation—The Feynman Approach Legacy
- …