Atlantic mammal traits: a dataset of morphological traits of mammals in the atlantic forest of south America

Measures of traits are the basis of functional biological diversity. Numerous works consider mean species-level measures of traits while ignoring individual variance within species. However, there is a large amount of variation within species and it is increasingly apparent that it is important to consider trait variation not only between species, but also within species. Mammals are an interesting group for investigating trait-based approaches because they play diverse and important ecological functions (e.g., pollination, seed dispersal, predation, grazing) that are correlated with functional traits. Here we compile a data set comprising morphological and life history information of 279 mammal species from 39,850 individuals of 388 populations ranging from −5.83 to −29.75 decimal degrees of latitude and −34.82 to −56.73 decimal degrees of longitude in the Atlantic forest of South America. We present trait information from 16,840 individuals of 181 species of non-volant mammals (Rodentia, Didelphimorphia, Carnivora, Primates, Cingulata, Artiodactyla, Pilosa, Lagomorpha, Perissodactyla) and from 23,010 individuals of 98 species of volant mammals (Chiroptera). The traits reported include body mass, age, sex, reproductive stage, as well as the geographic coordinates of sampling for all taxa. Moreover, we gathered information on forearm length for bats and body length and tail length for rodents and marsupials. No copyright restrictions are associated with the use of this data set. Please cite this data paper when the data are used in publications. We also request that researchers and teachers inform us of how they are using the data.Fil: Gonçalves, Fernando. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Bovendorp, Ricardo S.. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Beca, Gabrielle. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Bello, Carolina. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Costa Pereira, Raul. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Muylaert, Renata L.. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Rodarte, Raisa R.. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Villar, Nacho. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Souza, Rafael. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Graipel, Maurício E.. Universidade Federal de Santa Catarina; BrasilFil: Cherem, Jorge J.. Caipora Cooperativa, Florianopolis; BrasilFil: Faria, Deborah. Universidade Estadual de Santa Cruz; BrasilFil: Baumgarten, Julio. Universidade Estadual de Santa Cruz; BrasilFil: Alvarez, Martín R.. Universidade Estadual de Santa Cruz; BrasilFil: Vieira, Emerson M.. Universidade do Brasília; BrasilFil: Cáceres, Nilton. Universidade Federal de Santa María. Santa María; BrasilFil: Pardini, Renata. Universidade de Sao Paulo; BrasilFil: Leite, Yuri L. R.. Universidade Federal do Espírito Santo; BrasilFil: Costa, Leonora Pires. Universidade Federal do Espírito Santo; BrasilFil: Mello, Marco Aurelio Ribeiro. Universidade Federal de Minas Gerais; BrasilFil: Fischer, Erich. Universidade Federal do Mato Grosso do Sul; BrasilFil: Passos, Fernando C.. Universidade Federal do Paraná; BrasilFil: Varzinczak, Luiz H.. Universidade Federal do Paraná; BrasilFil: Prevedello, Jayme A.. Universidade do Estado de Rio do Janeiro; BrasilFil: Cruz-Neto, Ariovaldo P.. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Carvalho, Fernando. Universidade do Extremo Sul Catarinense; BrasilFil: Reis Percequillo, Alexandre. Universidade de Sao Paulo; BrasilFil: Paviolo, Agustin Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú; ArgentinaFil: Duarte, José M. B.. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil. Fundación Oswaldo Cruz; BrasilFil: Bernard, Enrico. Universidade Federal de Pernambuco; BrasilFil: Agostini, Ilaria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú; ArgentinaFil: Lamattina, Daniela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste; Argentina. Ministerio de Salud de la Nación; ArgentinaFil: Vanderhoeven, Ezequiel Andres. Ministerio de Salud de la Nación; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste; Argentin

ATLANTIC-CAMTRAPS: a dataset of medium and large terrestrial mammal communities in the Atlantic Forest of South America

Our understanding of mammal ecology has always been hindered by the difficulties of observing species in closed tropical forests. Camera trapping has become a major advance for monitoring terrestrial mammals in biodiversity rich ecosystems. Here we compiled one of the largest datasets of inventories of terrestrial mammal communities for the Neotropical region based on camera trapping studies. The dataset comprises 170 surveys of medium to large terrestrial mammals using camera traps conducted in 144 areas by 74 studies, covering six vegetation types of tropical and subtropical Atlantic Forest of South America (Brazil and Argentina), and present data on species composition and richness. The complete dataset comprises 53,438 independent records of 83 species of mammals, includes 10 species of marsupials, 15 rodents, 20 carnivores, eight ungulates and six armadillos. Species richness averaged 13 species (±6.07 SD) per site. Only six species occurred in more than 50% of the sites: the domestic dog Canis familiaris, crab-eating fox Cerdocyon thous, tayra Eira barbara, south American coati Nasua nasua, crab-eating raccoon Procyon cancrivorus and the nine-banded armadillo Dasypus novemcinctus. The information contained in this dataset can be used to understand macroecological patterns of biodiversity, community, and population structure, but also to evaluate the ecological consequences of fragmentation, defaunation, and trophic interactions. © 2017 by the Ecological Society of Americ

Influência da paisagem sobre a persistência de mamíferos terrestres em fragmentos de Mata Atlântica

A crescente demanda por fontes alternativas de energia tem contribuído para o aumento da produção de biocombustíveis, levando a fragmentação dos habitats naturais. No entanto, paisagens naturais imersas em matrizes agrícolas podem reter uma diversidade de espécies considerável, mas os efeitos da mudança no uso do solo para a produção de biocombustíveis sobre a persistência das espécies nessas paisagens ainda permanecem incertos. A Mata Atlântica, ecossistema mais fragmentado do Brasil, tem apenas cerca de 12% de sua cobertura vegetal original. A maioria destes remanescentes estão distribuídos em fragmentos pequenos e isolados devido à expansão agrícola, especialmente pela monocultura de cana-de-açúcar. No presente estudo examinamos a riqueza e a composição de mamíferos de médio e grande porte, e quantificamos a contribuição da cobertura florestal, da área estrutural e da quantidade de borda sobre a persistência desses animais. Amostramos 20 paisagens fragmentadas, em um gradiente de cobertura florestal (3% a 96%), imersas em plantações de cana-de-açúcar. Registramos apenas 50% das espécies esperadas de mamíferos de médio e grande porte em todas as 20 paisagens, em comparação com o maior remanescente de floresta semidecídua, o "Parque Estadual Morro do Diabo". Isso nos mostra que esses remanescentes de Mata Atlântica estão altamente empobrecidos, restando apenas25% de espécies especialistas florestais, e a maioria dos mamíferos registrados são espécies generalistas, exóticas e típicas de cerrado. A cobertura florestal foi importante para explicar apenas a presença de alguns ungulados e um roedor de médio porte. As comunidades de mamíferos responderam à substituição de espécies entre as paisagens, que representou 94% da β-diversidade total. Nosso estudo é novo em mostrar que a riqueza de mamíferos não foi afetada pela quantidade de habitat. É importante implementar medidas eficazes de conservação das áreas naturais em paisagens agrícolas, a fim de desenvolver medidas de restauração da cobertura florestal dos fragmentos, pois estes são cruciais para manter populações viáveis de espécies que dependem da floresta e ainda persistem nesses ambientes modificados.The growing demand for alternative energy sources has contributed to increased biofuel production, leading to fragmentation of natural habitats. However, natural landscapes immersed in agricultural matrices can retain a considerable diversity of species, but the effects of the change in land use for the production of biofuels on the persistence of the species in these landscapes remain unclear. The Atlantic Forest, the most fragmented ecosystems in Brazil, has only about 12% of its original vegetation cover. The most of these remnants are distributed in small and isolated fragments due to agricultural expansion, especially by the sugarcane monocultures. In the present study we examined the richness and composition of medium and large sized mammals, and quantify the contribution of the forest cover, the structural area and the edge amount over persistence of these animals. We sampled 20 fragmented landscapes on a forest cover gradient (3% to 96%), immersed in sugarcane plantations. We recorded only 50% of expected species of medium and large sized mammals in all the 20 landscapes, compared to the largest remnant of semideciduous forest, the "Morro do Diabo State Park". This shows that the Atlantic Forest remnants are highly depleted, with only 25% of forest-specialist species and most of the mammals registered are generalist species, exotic and typical from savana. Forest cover was important to explain only the presence of some ungulates and a medium sized rodent. The mammal communities responded to a high turnover of species between the landscapes, which represented 94% of the total β- diversity. Our study is novel in showing that mammal richness was not affected by the habitat amount. It is important to implement effective conservation measures in natural areas in agricultural landscapes in order to develop measures of restoration of forest cover of the fragments, because they are crucial to maintain viable populations of forest-dependent species and still persist in these modified environments.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP

Enriquecimento ambiental com anta (Tapirus terrestris) em cativeiro no Parque Ecológico Municipal de Americana - SP

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Ecosystem roles and conservation status of bioturbator mammals

The action of biological reworking of soils is referred to as bioturbation, and many species of mammals globally have an important role in soil disturbance, modifying ecosystem characteristics. We examined global patterns in the distribution, conservation status, and threats to the world's bioturbator mammals and illustrated the relevant roles these species play in ecosystem engineering related to soil processes and services. We searched the data available on 3932 non-flying land-dwelling mammals included in the International Union for Conservation of Nature's (IUCN) Red List. Using existing literature and online databases, we determined that 869 (22%) of the non-flying land-dwelling mammals accessed can be considered as bioturbators in three distinct groups: foragers (n = 123), semi-fossorial species (n = 652), and strictly fossorial species (n = 94). Of the world's bioturbator mammal species, 16% are threatened, 2% are already Extinct, and 8% are classified as Data Deficient. Foragers have the highest percentage of threatened (35%) and Extinct (5%) species, while strictly fossorial species have the highest percentage of Data Deficient species (12%). Although the majority of bioturbator mammal species are found in Asia (32%), Oceania is the continent with the highest percentage of threatened (27%) and Extinct (11%) bioturbator species, while Central and South America have the highest percentage of species classified as Data Deficient (24%). The threats experienced by the greatest number of bioturbator mammal species are activities related to agriculture and aquaculture (29%), and biological resource use (22%). Soil bioturbation can improve ecosystem health by reducing soil compaction, increasing nutrient cycling, soil moisture, microbe diversity, plant recruitment, and carbon storage. The loss of bioturbator mammals could trigger cascading effects throughout the ecosystems they inhabit. A better understanding of their conservation status is important so that effective conservation measures can be developed

Landscape of human fear in Neotropical rainforest mammals

The landscape of fear has profound effects on the species behavior, with most organisms engaging in risk avoidance behaviors in areas perceived as riskier. Most risk avoidance behaviors, such as temporal avoidance, have severe trade-offs between foraging efficiency and risk reduction. Human activities are able to affect the species landscape of fear, by increasing mortality of individuals (i.e. hunting, roadkill) and by disruption of the clues used by the species to estimate predation risk (e.g. light pollution). In this study, we used an extensive camera-trapping and night-time light satellite imagery to evaluate whether human activities affect the diel activity patterns of 17 species of rainforest dwelling mammals. We found evidence of diel activity shifts in eight of 17 analyzed species, in which five species become 21.6 % more nocturnal and three species become 11.7% more diurnal in high disturbed areas. This activity shifts were observed for both diurnal and nocturnal species. Persecuted species (game and predators) were more susceptible to present activity shifts. Since changes in foraging activity may affect species fitness, the behavior of humans’ avoidance may be another driver of the Anthropocene defaunation

High mammal species turnover in forest patches immersed in biofuel plantations

Remnant habitat patches immersed within biofuel cropland matrices can retain considerable species diversity, although the effects of land use change on species persistence in historically modified landscapes remain unclear. The Atlantic Forest is one of the most fragmented South American biodiversity hotspots and retains about 12% of its original vegetation cover. Most of these remnants are distributed in small isolated fragments immersed mainly within pastures and sugarcane monocultures. Here we examine how species richness and composition of medium and large-sized mammals are explained by forest cover, structural area and forest edge amount at the landscape scale. We sampled 22 fragmented landscapes dominated by sugarcane plantations along a wide gradient of forest cover (3% to 96%) in southeastern Brazil. We recorded 88% of terrestrial mammal species expected for this region, but many likely local extirpations were detected at the landscape scale, with losses between 50% to 80% of species. Most of the landscapes were highly depleted of forest-specialist species, with replacements by exotics and/or species typical of non-forest habitats. We found that total mammalian species richness, which includes forest-specialists, generalists, exotics and non-forest dwelling species, was not affected by landscape metrics, such as forest cover, structural area and forest edge amount. Nevertheless, forest cover was important predictor of the presence of three ungulates, a medium-sized rodent and an armadillo. Local mammalian communities exhibited a high degree of species turnover between landscapes, representing 95% of the total beta-diversity. In this region, where there was no regional extinction, landholder compliance with the Brazilian Forest Bill and restoration measures will enhance habitat connectivity and mammal persistence across the wider unprotected countryside. (C) 2017 Elsevier Ltd. All rights reserved

Delirium in critically ill children: an international point prevalence study∗

Objectives: To determine prevalence of delirium in critically ill children and explore associated risk factors. Design: Multi-institutional point prevalence study. Setting: Twenty-five pediatric critical care units in the United States, the Netherlands, New Zealand, Australia, and Saudi Arabia. Patients: All children admitted to the pediatric critical care units on designated study days (n = 994). Intervention: Children were screened for delirium using the Cornell Assessment of Pediatric Delirium by the bedside nurse. Demographic and treatment-related variables were collected. Measurements and Main Results: Primary study outcome measure was prevalence of delirium. In 159 children, a final determination of mental status could not be ascertained. Of the 835 remaining subjects, 25% screened positive for delirium, 13% were classified as comatose, and 62% were delirium-free and coma-free. Delirium prevalence rates varied significantly with reason for ICU admission, with highest delirium rates found in children admitted with an infectious or inflammatory disorder. For children who were in the PICU for 6 or more days, delirium prevalence rate was 38%. In a multivariate model, risk factors independently associated with development of delirium included age less than 2 years, mechanical ventilation, benzodiazepines, narcotics, use of physical restraints, and exposure to vasopressors and antiepileptics. Conclusions: Delirium is a prevalent complication of critical illness in children, with identifiable risk factors. Further multi-institutional, longitudinal studies are required to investigate effect of delirium on long-term outcomes and possible preventive and treatment measures. Universal delirium screening is practical and can be implemented in pediatric critical care units

Stroke in Children With Cardiac Disease: Report From the International Pediatric Stroke Study Group Symposium

BACKGROUND: Cardiac disease is a leading cause of stroke in children, yet limited data support the current stroke prevention and treatment recommendations. A multidisciplinary panel of clinicians was convened in February 2014 by the International Pediatric Stroke Study group to identify knowledge gaps and prioritize clinical research efforts for children with cardiac disease and stroke. RESULTS: Significant knowledge gaps exist, including a lack of data on stroke incidence, predictors, primary and secondary stroke prevention, hyperacute treatment, and outcome in children with cardiac disease. Commonly used diagnostic techniques including brain computed tomography and ultrasound have low rates of stroke detection, and diagnosis is frequently delayed. The challenges of research studies in this population include epidemiologic barriers to research such as small patient numbers, heterogeneity of cardiac disease, and coexistence of multiple risk factors. Based on stroke burden and study feasibility, studies involving mechanical circulatory support, single ventricle patients, early stroke detection strategies, and understanding secondary stroke risk factors and prevention are the highest research priorities over the next 5-10 years. The development of large-scale multicenter and multispecialty collaborative research is a critical next step. The designation of centers of expertise will assist in clinical care and research. CONCLUSIONS: There is an urgent need for additional research to improve the quality of evidence in guideline recommendations for cardiogenic stroke in children. Although significant barriers to clinical research exist, multicenter and multispecialty collaboration is an important step toward advancing clinical care and research for children with cardiac disease and stroke