Conservation interests of applying spatial distribution modelling to large vagile Neotropical mammals

International audienceSpecies Distribution Models (SDMs) have become increasingly useful for conservation issues. Initially designed to predict distributions of species from incomplete datasets, SDMs may also identify environmental conditions associated with higher occurrences and abundances of widely distributed taxa. Using sighting records of 15 widely distributed mammals from French Guiana, including primates, carnivores, rodents and ungulates, we used three SDMs-based on (i) entropy, (ii) genetic algorithm, (iii) Mahalanobis distance-to investigate relationships between species occurrence and predictive variables such as vegetation, biogeographic units, climate, and disturbance index. Maximal entropy procedures resulted in more accurate projected conditions: the accuracy of the predicted distributions was higher than 90% in nine species among the 15 tested, and predicted occurrences were correlated to field-measured abundances for nine species. The Genetic algorithm implemented with GARP had lower accuracy, with predicted occurrences correlated to abundances for three species only. Finally, Mahalanobis distance had a much lower performance and failed to find any correlation between occurrences and abundances. In the case of MaxEnt modelling, since map projection summarized more appropriate environmental conditions and identified areas likely to act as sources and/or corridors, we propose to use those appropriate environmental conditions as a proxy of conductance for landscape connectivity planning. We provide evidence here that SDMs can identify not only more suitable environmental conditions, but also areas hosting higher abundances for a large set of species with key ecological roles. Further management applications of this environmental suitability index could help in designing corridors between protected areas

Predators, Prey and Habitat Structure: Can Key Conservation Areas and Early Signs of Population Collapse Be Detected in Neotropical Forests?

Tropical forests with a low human population and absence of large-scale deforestation provide unique opportunities to study successful conservation strategies, which should be based on adequate monitoring tools. This study explored the conservation status of a large predator, the jaguar, considered an indicator of the maintenance of how well ecological processes are maintained. We implemented an original integrative approach, exploring successive ecosystem status proxies, from habitats and responses to threats of predators and their prey, to canopy structure and forest biomass. Niche modeling allowed identification of more suitable habitats, significantly related to canopy height and forest biomass. Capture/recapture methods showed that jaguar density was higher in habitats identified as more suitable by the niche model. Surveys of ungulates, large rodents and birds also showed higher density where jaguars were more abundant. Although jaguar density does not allow early detection of overall vertebrate community collapse, a decrease in the abundance of large terrestrial birds was noted as good first evidence of disturbance. The most promising tool comes from easily acquired LiDAR data and radar images: a decrease in canopy roughness was closely associated with the disturbance of forests and associated decreasing vertebrate biomass. This mixed approach, focusing on an apex predator, ecological modeling and remote-sensing information, not only helps detect early population declines in large mammals, but is also useful to discuss the relevance of large predators as indicators and the efficiency of conservation measures. It can also be easily extrapolated and adapted in a timely manner, since important open-source data are increasingly available and relevant for large-scale and real-time monitoring of biodiversity

Biomass Index (kg^-1 × km of transect) of a selected set of terrestrial birds and mammals, according to the Human Footprint Index, and associated correlation curves.

<p>The four study sites for jaguar density assessment are given on the index scale, according to their mean value. The two pictures show sites with a 5–10 Index value (left) and a 15–20 Index value (right).</p

French Guiana more favorable habitats of prey.

<p>Protected areas: nature reserves and national parks, in green. Hatchings: area with Human Footprint Index < 15 (thresold value allowing maintenance of the abundance of most of prey species). Dark grey: forest areas with canopy roughness > 12, favoring higher biomass of prey.</p

Field surveys required to assess abundance of ungulates and two frugivorous birds, based on 40 surveys (up), and the number of jaguars based on four study areas (down).

<p>Top: the r coefficient correlation shows the correlation between the stabilized abundance (sampling effort > 100 km) and abundance assessed with a lesser sampling effort. The correlation is derived from 40 surveys.</p

French Guiana study sites, with the protected areas.

<p>Protected areas: nature reserves and national parks, in green. Locations of the sites where camera-trap surveys were implemented (1, Montagne de Fer; 2, Counami; 3, Montagne de Kaw; 4, Nouragues) in light brown; locations of the areas where line-transects were implemented in dark brown; and jaguar habitats from less favorable (light grey) to more favorable (dark grey).</p

Results of four camera-trapping surveys in French Guiana for jaguars.

<p>Results of four camera-trapping surveys in French Guiana for jaguars.</p

Fauna communities on the four study sites with implementation of both camera-trapping and linear transects: jaguar density, biomass index of mammal prey, biomass index of terrestrial bird prey.

<p>Fauna communities on the four study sites with implementation of both camera-trapping and linear transects: jaguar density, biomass index of mammal prey, biomass index of terrestrial bird prey.</p

Recent demographic history and present fine-scale structure in the Northwest Atlantic leatherback (Dermochelys coriacea) turtle population.

The leatherback turtle Dermochelys coriacea is the most widely distributed sea turtle species in the world. It exhibits complex life traits: female homing and migration, migrations of juveniles and males that remain poorly known, and a strong climatic influence on resources, breeding success and sex-ratio. It is consequently challenging to understand population dynamics. Leatherbacks are critically endangered, yet the group from the Northwest Atlantic is currently considered to be under lower risk than other populations while hosting some of the largest rookeries. Here, we investigated the genetic diversity and the demographic history of contrasted rookeries from this group, namely two large nesting populations in French Guiana, and a smaller one in the French West Indies. We used 10 microsatellite loci, of which four are newly isolated, and mitochondrial DNA sequences of the control region and cytochrome b. Both mitochondrial and nuclear markers revealed that the Northwest Atlantic stock of leatherbacks derives from a single ancestral origin, but show current genetic structuration at the scale of nesting sites, with the maintenance of migrants amongst rookeries. Low nuclear genetic diversities are related to founder effects that followed consequent bottlenecks during the late Pleistocene/Holocene. Most probably in response to climatic oscillations, with a possible influence of early human hunting, female effective population sizes collapsed from 2 million to 200. Evidence of founder effects and high numbers of migrants make it possible to reconsider the population dynamics of the species, formerly considered as a metapopulation model: we propose a more relaxed island model, which we expect to be a key element in the currently observed recovering of populations. Although these Northwest Atlantic rookeries should be considered as a single evolutionary unit, we stress that local conservation efforts remain necessary since each nesting site hosts part of the genetic diversity and species history

The influence of oceanographic features on the foraging behavior of the olive ridley sea turtle Lepidochelys olivacea along the Guiana coast

International audienceThe circulation in the Western Equatorial Atlantic is characterized by a highly dynamic mesoscale activity that shapes the Guiana continental shelf. Olive ridley sea turtles (Lepidochelys olivacea) nesting in French Guiana cross this turbulent environment during their post-nesting migration. We studied how oceanographic and biological conditions drove the foraging behavior of 18 adult females, using satellite telemetry, remote sensing data (sea surface temperature, sea surface height, current velocity and euphotic depth), simulations of micronekton biomass (pelagic organisms) and in situ records (water temperature and salinity). The occurrence of foraging events throughout migration was located using Residence Time analysis, while an innovative proxy of the hunting time within a dive was used to identify and quantify foraging events during dives. Olive ridleys migrated northwestwards using the Guiana current and remained on the continental shelf at the edge of eddies formed by the North Brazil retroflection, an area characterized by low turbulence and high micronekton biomass. They performed mainly pelagic dives, hunting for an average 77% of their time. Hunting time within a dive increased with shallower euphotic depth and with lower water temperatures, and mean hunting depth increased with deeper thermocline.This is the first study to quantify foraging activity within dives in olive ridleys, and reveals the crucial role played by the thermocline on the foraging behavior of this carnivorous species. This study also provides novel and detailed data describing how turtles actively use oceanographic structures during post-nesting migration