First records of dwarf sperm whale (Kogia sima) from the Union of the Comoros

The world distribution of dwarf and pygmy sperm whales (Cetacea: Kogiidae) [Kogia spp.] is poorly known, and derived mostly from records of stranded animals. At sea, both species are elusive and difficult to identify. We photo-documented the presence of dwarf sperm whale (Kogia sima) in the waters of the Union of the Comoros. All three occurrences were sightings of apparently healthy animals from 2011 to 2013 in and near Itsandra Bay, off the island of Grande Comore. We discuss the importance of the Mozambique Channel and the Agulhas Current Large Marine Ecosystem for the species in the Western Indian Ocean

Changing Patterns of Malaria in Grande Comore after a Drastic Decline: Importance of Fine-Scale Spatial Analysis to Inform Future Control Actions

Malaria has long been endemic in the Union of Comoros reaching an incidence of 15,045 cases for 100,000 inhabitants in 2010 (103,670 cases). Since then, strengthened control actions based on the distribution of Long-Lasting Insecticidal mosquito Nets and mass treatment have reduced malaria to a low level. However, it persists more specifically in Grande Comore, where 82% of cases were diagnosed between 2010 and 2016. This situation remains a challenge for health authorities seeking to eliminate malaria, by targeting transmission sites more precisely. In this context, this study aimed at mapping malaria at the finest scale, in order to describe its spatial distribution and identify possible environmental indicators. The National Malaria Control Program provided the 2016 data, the only year that could be mapped at the level of localities. This mapping revealed spatial autocorrelation between localities, especially in the east of the island with a major cluster around Itsinkoudi (using the Kulldorff’s spatial scan test). Secondary clusters showed that malaria remains present throughout the island in both rural and urban areas. We also analyzed satellite images (SPOT 5) with remote sensing techniques (Object-Based Image Analysis) to look for environmental indicators. Landscape analysis shows that malaria incidence is correlated across the island with low altitudes, and a larger proportion of grasslands or a fewer proportion of forested areas nearby (at less than 1km around villages). More locally in the east, malaria is linked to larger shrub areas. These relationships could be associated with the fact that lower altitude localities are more interconnected, such facilitating malaria transmission. In 2016, malaria persists in Grande Comore, showing new patterns with more cases in the eastern part of the island and the possibility of high incidences during the dry season. Precise mapping of epidemiological data and landscape analysis allow the identification of clusters and active transmission foci. They are important tools for health surveillance in order to optimize control actions on key transmission locations

Hétérogénéité spatiale des liens entre l’urbanisation et les inondations dans deux quartiers contrastés d’Abidjan, Côte d’Ivoire

International audienc

Recul et persistance du paludisme en Union des Comores : une approche géographique pour déterminer l’importance des facteurs environnementaux et sociaux dans son maintien

Malaria has been present in the Comoros archipelago since 1925, when a major epidemic was first recorded in Grande Comore. The islands have been favourable to the development of vectors causing malaria transmission (Anopheles gambiae and Anopheles funestus) due to the high tropical rainfall, high hydrographic density, the suitable environment with forests and wetlands, as well as the construction of water reservoirs in households. This disease has been endemic since the 1970s and a major public health problem until the 2000s. From the end of the 1990s, the Comorian government has decided to implement a strategy to control malaria by anti-malaria vector control and population protection against mosquito bites. In the last twenty years, malaria control efforts have been intensified and for a first time, mass treatment with Artequick has been carried out in Mohéli (2007-2009), Anjouan (2012-2013) and Grande Comore (2013). There has since been a dramatic decline in malaria on all the islands, as Mohéli and Anjouan have entered a pre-elimination phase and Grande Comore is in the control phase. In the first part, this thesis describes the spatial and temporal dynamics of malaria before and after mass treatment in order to understand the impact of different control actions. A mapping of hospital prevalence and incidence of malaria at the district and village levels shows its decline in Anjouan and Mohéli and its persistence in Grande Comore. Spatial autocorrelation tests have revealed a similarity in malaria transmission between neighbouring localities that are forming clusters in Grande Comore. In the second part, it was demonstrated that environmental factors have an influence on malaria transmission, despite the greater importance of control actions. At the district level, simple and multiple linear regression models have been established between the incidence of malaria and land cover / land use patterns of islands and landscape indicators at the village level in Grande Comore. A survey on people's knowledge, practices and vulnerabilities was conducted among 1,288 households in the Union of the Comoros to assess factors of vulnerability that contribute to malaria transmission. Beyond having water reservoirs in households, the waste disposal location would also have an impact on malaria in Grande Comore. The survey revealed that several households on the large island did not take the 2013 mass treatment. This thesis provides a better understanding of the human and environmental aspects of malaria maintenance and thus aims to better target future control actions.Le paludisme a sévi dans l’archipel des Comores depuis 1925 où une grande épidémie s’est déclenchée à la Grande Comore. Ces îles ont offert des conditions favorables au développement des vecteurs responsables de la transmission du paludisme (Anopheles gambiae et Anopheles funestus) avec un climat tropical humide, une forte densité hydrographique, un environnement forestier et marécageux et la construction de citernes de collecte d’eau de pluie dans les habitations. Cette maladie est devenue endémique stable depuis les années 70 et un problème de santé publique majeur jusqu’aux années 2000. Dès la fin des années 90, le gouvernement comorien a décidé de mettre en place une stratégie de lutte contre le paludisme par la lutte anti-vectorielle et la protection de la population contre les piqûres des moustiques. Ces vingt dernières années, ces actions de lutte contre le paludisme se sont intensifiées et, pour la première fois, un traitement de masse à base d’Artequick a été réalisé à Mohéli (2007-2009), à Anjouan (2012-2013) et à la Grande Comore (2013). Depuis, un recul spectaculaire du paludisme a été observé sur l’ensemble des îles, car Mohéli et Anjouan sont entrées en phase de pré-élimination et la Grande Comore en phase de contrôle. Cette thèse décrit, dans la première partie, l’évolution spatiale et temporelle du paludisme avant et après le traitement de masse pour appréhender l’impact des différentes actions de lutte. Une cartographie de la prévalence en milieu hospitalier et de l’incidence du paludisme à l’échelle des districts sanitaires et des villages montre son recul à Anjouan et Mohéli et son maintien à la Grande Comore. Les tests d’autocorrélation spatiale ont révélé une similitude de la transmission du paludisme entre des localités proches, qui forment des clusters à la Grande Comore. Nous avons démontré, dans la deuxième partie, qu’il existe bel et bien une influence des facteurs environnementaux sur la transmission du paludisme bien que les actions de lutte ont plus de poids. À l’échelle des districts sanitaires, des modèles de régressions linéaires simple et multiple ont été établis entre l’incidence du paludisme et les caractéristiques de l’occupation du sol des îles et les indicateurs paysagers à l’échelle des villages de la Grande Comore. Une enquête sur les connaissances, les pratiques et les vulnérabilités des populations a été menée sur 1288 ménages de l’Union des Comores pour appréhender les facteurs de vulnérabilité favorables à la transmission du paludisme. Au-delà de la présence des citernes dans les ménages, le lieu de dépôt de déchets ménagers favoriserait son maintien à la Grande Comore. L’enquête a révélé que plusieurs ménages de la grande île n’avaient pas pris le traitement de masse de 2013. Cette thèse permet de mieux comprendre les aspects humains et environnementaux du maintien du paludisme et vise ainsi à mieux cibler les futures actions de lutte

Roll-back and persistence of malaria in the Union of the Comoros : a geographical approach to assess the importance on environmental and social factors in its maintenance

Le paludisme a sévi dans l’archipel des Comores depuis 1925 où une grande épidémie s’est déclenchée à la Grande Comore. Ces îles ont offert des conditions favorables au développement des vecteurs responsables de la transmission du paludisme (Anopheles gambiae et Anopheles funestus) avec un climat tropical humide, une forte densité hydrographique, un environnement forestier et marécageux et la construction de citernes de collecte d’eau de pluie dans les habitations. Cette maladie est devenue endémique stable depuis les années 70 et un problème de santé publique majeur jusqu’aux années 2000. Dès la fin des années 90, le gouvernement comorien a décidé de mettre en place une stratégie de lutte contre le paludisme par la lutte anti-vectorielle et la protection de la population contre les piqûres des moustiques. Ces vingt dernières années, ces actions de lutte contre le paludisme se sont intensifiées et, pour la première fois, un traitement de masse à base d’Artequick a été réalisé à Mohéli (2007-2009), à Anjouan (2012-2013) et à la Grande Comore (2013). Depuis, un recul spectaculaire du paludisme a été observé sur l’ensemble des îles, car Mohéli et Anjouan sont entrées en phase de pré-élimination et la Grande Comore en phase de contrôle. Cette thèse décrit, dans la première partie, l’évolution spatiale et temporelle du paludisme avant et après le traitement de masse pour appréhender l’impact des différentes actions de lutte. Une cartographie de la prévalence en milieu hospitalier et de l’incidence du paludisme à l’échelle des districts sanitaires et des villages montre son recul à Anjouan et Mohéli et son maintien à la Grande Comore. Les tests d’autocorrélation spatiale ont révélé une similitude de la transmission du paludisme entre des localités proches, qui forment des clusters à la Grande Comore. Nous avons démontré, dans la deuxième partie, qu’il existe bel et bien une influence des facteurs environnementaux sur la transmission du paludisme bien que les actions de lutte ont plus de poids. À l’échelle des districts sanitaires, des modèles de régressions linéaires simple et multiple ont été établis entre l’incidence du paludisme et les caractéristiques de l’occupation du sol des îles et les indicateurs paysagers à l’échelle des villages de la Grande Comore. Une enquête sur les connaissances, les pratiques et les vulnérabilités des populations a été menée sur 1288 ménages de l’Union des Comores pour appréhender les facteurs de vulnérabilité favorables à la transmission du paludisme. Au-delà de la présence des citernes dans les ménages, le lieu de dépôt de déchets ménagers favoriserait son maintien à la Grande Comore. L’enquête a révélé que plusieurs ménages de la grande île n’avaient pas pris le traitement de masse de 2013. Cette thèse permet de mieux comprendre les aspects humains et environnementaux du maintien du paludisme et vise ainsi à mieux cibler les futures actions de lutte.Malaria has been present in the Comoros archipelago since 1925, when a major epidemic was first recorded in Grande Comore. The islands have been favourable to the development of vectors causing malaria transmission (Anopheles gambiae and Anopheles funestus) due to the high tropical rainfall, high hydrographic density, the suitable environment with forests and wetlands, as well as the construction of water reservoirs in households. This disease has been endemic since the 1970s and a major public health problem until the 2000s. From the end of the 1990s, the Comorian government has decided to implement a strategy to control malaria by anti-malaria vector control and population protection against mosquito bites. In the last twenty years, malaria control efforts have been intensified and for a first time, mass treatment with Artequick has been carried out in Mohéli (2007-2009), Anjouan (2012-2013) and Grande Comore (2013). There has since been a dramatic decline in malaria on all the islands, as Mohéli and Anjouan have entered a pre-elimination phase and Grande Comore is in the control phase. In the first part, this thesis describes the spatial and temporal dynamics of malaria before and after mass treatment in order to understand the impact of different control actions. A mapping of hospital prevalence and incidence of malaria at the district and village levels shows its decline in Anjouan and Mohéli and its persistence in Grande Comore. Spatial autocorrelation tests have revealed a similarity in malaria transmission between neighbouring localities that are forming clusters in Grande Comore. In the second part, it was demonstrated that environmental factors have an influence on malaria transmission, despite the greater importance of control actions. At the district level, simple and multiple linear regression models have been established between the incidence of malaria and land cover / land use patterns of islands and landscape indicators at the village level in Grande Comore. A survey on people's knowledge, practices and vulnerabilities was conducted among 1,288 households in the Union of the Comoros to assess factors of vulnerability that contribute to malaria transmission. Beyond having water reservoirs in households, the waste disposal location would also have an impact on malaria in Grande Comore. The survey revealed that several households on the large island did not take the 2013 mass treatment. This thesis provides a better understanding of the human and environmental aspects of malaria maintenance and thus aims to better target future control actions

Hétérogénéité spatiale des liens entre l’urbanisation et les inondations dans deux quartiers contrastés d’Abidjan, Côte d’Ivoire

International audienc

A free high resolution land cover on the small Indian Ocean islands, an example of its use with the study of vector-borne diseases

International audienceThe southwest of the Indian Ocean comprises numerous islands of less than 3000 sq km (Comoros, Seychelles, Mascarene Islands). These small island territories have very fragmented and diversified environments. Satellite imagery and products at low and medium spatial resolution (usually from 4 kilometers to 250 meters) are not or poorly suited to the study of these areas. This is particularly the case for ecological studies such as the study of vector-borne diseases where the evaluation of interactions at a fine scale is critical to understand their spatial dynamics. To overcome this need, we realized a homogeneous land cover mapping of these small islands, by analysing SPOT 5 satellite images acquired between July 2013 and July 2014 by SEAS-OI Station. We used an object-based image analysis method to identify the 12 major classes of land cover / land use of these tropical islands. This methodology together with a good knowledge of the field has enabled us to achieve an overall accuracy of 85%, making it an operational product. In order to illustrate the importance of this dataset, we present its use in health research to describe thelocation of health observations: whether the place of residence of patients or the points of capture of disease vectors through several examples in Reunion, Mayotte, the Union of the Comoros and the Republic of Seychelles. In these studies, high resolution allows to provide very fine information on the surrounding environment, while little data is usually available at this scale. In the statistical analyzes, these data were mainly used to differentiate between infected and non-infected individuals. This high resolution landcover is available on a web portal to allow a wider distribution to researchers and thematicians using land cover information in their field

Homisland-IO : Homogeneous land use/land cover over the Small Islands of the Indian Ocean

International audienceMany small islands are located in the southwestern Indian Ocean. These islands have their own environmental specificities and very fragmented landscapes. Generic land use products developed from low and medium resolution satellite images are not suitable for studying these small territories. This is why we have developed a land use/land cover product, called Homisland-IO, based on remote sensing processing on high spatial resolution satellite images acquired by SPOT 5 satellite between December 2012 and July 2014. This product has been produced using an object-based classification process. The overall accuracy of the product is 86%. Homisland-IO is freely accessible through a web portal and is thus available for future use

A Land Use/Land cover on the small Indian Ocean islands, an example of its use with the study of vector-borne diseases

International audienceThe southwestern Indian Ocean comprises numerous islands of less than 3000 sq km (Comoros, Seychelles, Mascarene Islands). These small island territories have very fragmented and diversified landscapes. Satellite imagery and landcover products at low and medium spatial resolution (usually from 4 kilometers to 250 meters) are not or poorly suited to the study of these areas. Therefore, we have developed a land use product, called Homisland-IO, based on the analysis of high spatial resolution images acquired by the SPOT 5 satellite between December 2012 and July 2014 and produced at the SEAS-OI Station. We used an object-based image analysis method to identify the 11 major classes of land cover / land use of these tropical islands. This methodology together with a good knowledge of the field has enabled us to achieve an overall accuracy of 86%, making it an operational product. These products have already been used in various projects, including epidemiology and health geography (Lept-OI, TROI, ISSE-Mayotte, etc) to describe the distribution and habitat of some vectors of diseases (mainly mosquitoes and rodents), a necessary condition for analyzing the risk of transmission of these diseases to humans