219 research outputs found

    A toggle-switch and a feed-forward loop engage in the control of the Drosophila retinal determination gene network

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    Dipterans show a striking range of eye sizes, shapes, and functional specializations. Their eye is of the compound type, the most frequent eye architecture in nature. The development of this compound eye has been most studied in Drosophila melanogaster. The early development of the Drosophila eye is under the control of a gene regulatory network of transcription factors and signaling molecules called the retinal determination gene network (RDGN). Nodes in this network have been found to be involved not only in the development of different eye types in invertebrates and vertebrates, but also of other organs. Here we have analyzed the network properties in detail. First, we have generated quantitative expression profiles for a number of the key RDGN transcription factors, at a single-cell resolution. With these profiles, and applying a correlation analysis, we revisited several of the links in the RDGN. Our study uncovers a new link, that we confirm experimentally, between the transcription factors Hth/Meis1 and Optix/Six3 and indicates that, at least during the period of eye differentiation, positive feedback regulation from Eya and Dac on the Pax6 gene Ey is not operating. From this revised RDGN we derive a simplified gene network that we model mathematically. This network integrates three basic motifs: a coherent feedforward loop, a toggle-switch and a positive autoregulation which, together with the input from the Dpp/BMP2 signaling molecule, recapitulate the gene expression profiles obtained experimentally, while ensuring a robust transition from progenitor cells into retinal precursors.This work was funded by MINECO and the Agencia Estatal de Investigacion (AEI) of Spain, co-financed by FEDER funds (EU) through grants BFU2012-34324 and BFU2015-66040-P to FC, MDM-2016-0687 in which FC is participant researcher, and TIN2017-89842 P in which MCL is participant researcher

    Simulación de la onda de avenida por ruptura de tanque de enfriamiento

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    Se llevó a cabo la simulación de la ruptura del borde de un tanque de enfriamiento usando dos métodos: Uno de volúmenes finitos denominado CARPA y un algoritmo en diferencias finitas centradas. El algoritmo en volúmenes finitos CARPA utilizado con el pre y post procesador GiD mostró ser una herramienta muy poderosa en la animación de planicies de inundación, útiles en la interpretación de resultados tanto en el espacio como en el tiempo, para la protección civil, así como para definir las posibles zonas afectadas debido a fenómenos como el de la ruptura de bordo

    Effectiveness of the Natura 2000 network in protecting Iberian endemic fauna

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    The Iberian Peninsula is a major European region of biodiversity, as it harbours more than 30% of European endemic species. Despite a number of studies having evaluated the ability of nature reserves to protect certain taxa, there is still a lack of knowledge on how Iberian endemic fauna are represented in these reserves. We detected biodiversity hotspots of Iberian endemicity and evaluated the effectiveness of the Natura 2000 network (N2000) in representing 249 endemic species from eight animal taxonomic groups (amphibians, mammals, freshwater fishes, reptiles, water beetles, butterflies, lacewings and dung beetles). We found that only the 10% of these Iberian endemic species are considered species of community interest (i.e. species included in the Annexes of the Habitats Directive). We conducted gap analyses and null models of representativeness in N2000. Generally, N2000 is effective in its representation of Iberian endemic fauna, although we detected species and few hotspots of endemism that were still not represented. It is necessary to declare a few new protected areas, thus enhancing N2000's effectiveness in the conservation of the Iberian endemic fauna. Although the aim of N2000 is to protect species listed in the Birds and Habitats Directives, the conservation status of endemic species from one of the most important areas of Europe in terms of biodiversity, could be also a concern for the European Union. Our results are useful in the context of the recent European Commission mandate calling for a ‘fitness check’ of the Birds and Habitats Directives. This approach could be also applicable to other regions with high value of endemicity.DS‐F was supported by a post‐doctoral contract funded by Universidad de Castilla‐La Mancha and the European Social Fund (ESF). PA was supported by a ‘Ramón y Cajal’ contract (RYC‐2011‐07670, MINECO). This research was partially funded by project POII11‐0277‐5747 (Junta de Castilla‐La Mancha).Peer Reviewe

    c-Src functionality controls self-renewal and glucose metabolism in MCF7 breast cancer stem cells

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    Deregulation of Src kinases is associated with cancer. We previously showed that SrcDN conditional expression in MCF7 cells reduces tumorigenesis and causes tumor regression in mice. However, it remained unclear whether SrcDN affected breast cancer stem cell functionality or it reduced tumor mass. Here, we address this question by isolating an enriched population of Breast Cancer Stem Cells (BCSCs) from MCF7 cells with inducible expression of SrcDN. Induction of SrcDN inhibited self-renewal, and stem-cell marker expression (Nanog, Oct3-4, ALDH1, CD44). Quantitative proteomic analyses of mammospheres from MCF7-Tet-On-SrcDN cells (data are available via ProteomeXchange with identifier PXD017789, project DOI: 10.6019/PXD017789) and subsequent GSEA showed that SrcDN expression inhibited glycolysis. Indeed, induction of SrcDN inhibited expression and activity of hexokinase, pyruvate kinase and lactate dehydrogenase, resulting in diminished glucose consumption and lactate production, which restricted Warburg effect. Thus, c-Src functionality is important for breast cancer stem cell maintenance and renewal, and stem cell transcription factor expression, effects linked to glucose metabolism reduction.This work has been supported by grand SAF2016–75991-R (MINECO, AEI/FEDER, UE) to Jorge Martín-Pérez and ISCIII [grand PI 16/00789] to Miguel Ángel Fernández-Moreno. Víctor Mayoral-Varo was supported by the grand SAF2016–75991-R (MINECO, AEI/FEDER, UE). We acknowledge support for publication fee by the CSIC Open Access Publication Support Initiative through its Unit for Information Resources for Research (URICI)

    The Palaeocene Cerro Munro tonalite intrusion (Chubut Province, Argentina): A plutonic remnant of explosive volcanism?

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    The Cerro Munro sub-volcanic intrusion is emplaced in the back-arc (400 km from the trench) as small sub-circular tonalite-granodiorite plutons with abundant radial porphyritic dikes. U-Pb zircon SHRIMP data give an age of crystallization of 57 Ma ± 1.4 Ma. It is located to the east of the North Patagonian Batholith (NPB) that shows a protracted and episodic magmatic history from Cretaceous to Miocene time. The NPB Palaeogene episode is characterized by the lack of magmatic activity at the arc axis, as small plutonic emplacements move to the fore-arc and back-arc. This Palaeogene tectono-magmatic episode is ruled by the detachment of the Aluk plate during the Aluk-Farallon-SAM triple junction, active at that time along northern Patagonia active margin, changing the Cretaceous ?NPB orogenic? setting to a Palaeogene ?Munro transitional? tectono-magmatic setting. Near the contacts, the tonalite contains abundant enclaves of igneous appearance and variable size from several cm to dm, described as autoliths. The study of autoliths and host tonalite reveals interesting results on the processes of fractionation in a thermally zoned magma chamber. Autoliths, and in a large extent the host tonalite, represent disguised cumulates from which a hydrous silicic liquid was extracted. Barometry calculations from mineral chemistry in both autoliths and tonalites record a shallow pressure of emplacement of 0.5 kbar. Rhyolite-dacite flows and ignimbrites, surrounding the northern contact of the Cerro Munro tonalite, may represent the exsolved liquid from the plutonic cumulates. The study by cathodoluminiscence and electron backscattered diffraction techniques from a rhyolite-hosted quartz supports this protracted history of the Cerro Munro magma chamber.Facultad de Ciencias Naturales y MuseoCentro de Investigaciones GeológicasConsejo Nacional de Investigaciones Científicas y Técnica

    The Palaeocene Cerro Munro tonalite intrusion (Chubut Province, Argentina): A plutonic remnant of explosive volcanism?

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    The Cerro Munro sub-volcanic intrusion is emplaced in the back-arc (400 km from the trench) as small sub-circular tonalite-granodiorite plutons with abundant radial porphyritic dikes. U-Pb zircon SHRIMP data give an age of crystallization of 57 Ma ± 1.4 Ma. It is located to the east of the North Patagonian Batholith (NPB) that shows a protracted and episodic magmatic history from Cretaceous to Miocene time. The NPB Palaeogene episode is characterized by the lack of magmatic activity at the arc axis, as small plutonic emplacements move to the fore-arc and back-arc. This Palaeogene tectono-magmatic episode is ruled by the detachment of the Aluk plate during the Aluk-Farallon-SAM triple junction, active at that time along northern Patagonia active margin, changing the Cretaceous ?NPB orogenic? setting to a Palaeogene ?Munro transitional? tectono-magmatic setting. Near the contacts, the tonalite contains abundant enclaves of igneous appearance and variable size from several cm to dm, described as autoliths. The study of autoliths and host tonalite reveals interesting results on the processes of fractionation in a thermally zoned magma chamber. Autoliths, and in a large extent the host tonalite, represent disguised cumulates from which a hydrous silicic liquid was extracted. Barometry calculations from mineral chemistry in both autoliths and tonalites record a shallow pressure of emplacement of 0.5 kbar. Rhyolite-dacite flows and ignimbrites, surrounding the northern contact of the Cerro Munro tonalite, may represent the exsolved liquid from the plutonic cumulates. The study by cathodoluminiscence and electron backscattered diffraction techniques from a rhyolite-hosted quartz supports this protracted history of the Cerro Munro magma chamber.Facultad de Ciencias Naturales y MuseoCentro de Investigaciones GeológicasConsejo Nacional de Investigaciones Científicas y Técnica

    Spectroscopic bulge-disc decomposition: a new method to study the evolution of lenticular galaxies

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    A new method for spectroscopic bulge-disc decomposition is presented, in which the spatial light profile in a two-dimensional spectrum is decomposed wavelength-by-wavelength into bulge and disc components, allowing separate one-dimensional spectra for each component to be constructed. This method has been applied to observations of a sample of nine S0s in the Fornax Cluster in order to obtain clean high-quality spectra of their individual bulge and disc components. So far this decomposition has only been fully successful when applied to galaxies with clean light profiles, consequently limiting the number of galaxies that could be separated into bulge and disc components. Lick index stellar population analysis of the component spectra reveals that in those galaxies where the bulge and disc could be distinguished, the bulges have systematically higher metallicities and younger stellar populations than the discs. This correlation is consistent with a picture in which S0 formation comprises the shutting down of star formation in the disc accompanied by a final burst of star formation in the bulge. The variation in spatial-fit parameters with wavelength also allows us to measure approximate colour gradients in the individual components. Such gradients were detected separately in both bulges and discs, in the sense that redder light is systematically more centrally concentrated in all components. However, a search for radial variations in the absorption line strengths determined for the individual components revealed that they are absent from the vast majority of S0 discs and bulges. The absence of gradients in line indices for most galaxies implies that the colour gradient cannot be attributed to age or metallicity variations, and is therefore most likely associated with varying degrees of obscuration by dust.Comment: 10 pages, 10 figures, 1 table, accepted for publication in MNRA
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