The Impact of Multiple Nursery Areas on the Population Structure of Atlantic Menhaden, \u3ci\u3eBrevooria tyrannus\u3c/i\u3e

Understanding the population structure and patterns of connectivity in marine fishes is essential when making predictions about a species\u27 resiliency and persistence in an increasingly changing environment. The Atlantic Menhaden Brevoortia tyrannus is a clupeid that plays a critical role in the marine food web and supports one of the largest fisheries on the US East Coast. In addition to a decrease in overall numbers and spawning stock biomass, recruitment levels have remained low since the 1990s. Menhaden use numerous estuaries along the Atlantic coast for juvenile development before recruiting to the adult population and the contribution of each of these nursery grounds is currently unknown. The Chesapeake Bay is believed to contribute 69% of the total recruits, although this estimate has never been quantitatively verified and is 25 years old, predating current low recruitment levels and increased development along the coastline. This study investigated the potential of trace element (Li, Mg, Mn, Rb, Sr, Y, Ba and Pb) and stable isotope (δ 13C and δ18O) signatures in otoliths to distinguish between coast-wide nursery grounds of menhaden for 2009-2011. Using geochemical signatures specific to each year, juvenile menhaden collected from Connecticut to South Carolina were classified to regional nursery grounds at nearly 90% accuracy. The geochemical signatures were applied to adult menhaden of unknown natal origin that corresponded to these year-classes to determine which nursery is producing the most recruits to the fishable stock. The results indicate that while the Chesapeake Bay still dominates the proportion of age-1 recruits, the Bay\u27s contribution has declined by 16-65% of the earlier estimate. Additionally, an evaluation of older age classes (ages 2-4), the spawning stock, offered a more complete assessment with nearly 70% of adults originating from the Northeast and Southeast nursery grounds rather than the Mid-Atlantic as previously believed. This study successfully evaluates historical estimates of nursery contribution for menhaden, identifies regions that are currently essential for survivorship of this population, and, thus, provides critical information to future stock assessments for this species

Genetic and Biotypic Diversity of Greenbug Schizaphis Graminum (Rondani) Populations on Non-cultivated Hosts

Chapter I of this thesis is an introduction and literature review focusing on the history and biology of Schizaphis graminum. It concentrates on host use and biotypes. Chapters II, III and IV are formal manuscripts of the research I conducted during my M.S. program and are written in compliance with the publication policies and guidelines for manuscript preparation with the appropriate journals

Lung Transplantation in a Patient with COVID-19-Associated Acute Respiratory Failure

Coronavirus disease 2019 (COVID-19) is currently a significant cause of acute respiratory failure worldwide, leading to irreversible fibrotic lung disease. In patients with persistent respiratory failure after acute COVID-19 infection, lung transplant is an emerging option. Here, we have presented a case where the patient required venovenous extracorporeal membrane oxygenation (VV-ECMO) support for 33 days until a bilateral lung transplant was performed on day 71 after the initial COVID-19 infection. The early outcomes have been favorable. Currently, no guidelines exist for an acceptable time period after initial COVID-19 infection, duration of negative COVID polymerase chain reaction (PCR) testing, or negative Vero cell culture in the setting of persistent positive COVID PCR testing before listing for a lung transplant. Due to a lack of standardized guidelines, this patient was not listed for a lung transplant until the COVID-19 PCRs came negative on days 47 and 49 after the infection

The Path to an Ecosystem Approach for Forage Fish Management: A Case Study of Atlantic Menhaden

Atlantic menhaden (Brevoortia tyrannus) support the largest fishery by volume on the United States East Coast, while also playing an important role as a forage species. Managers’ and stakeholders’ increasing concerns about the impact of Atlantic menhaden harvest on ecosystem processes led to an evolution in the assessment and management of this species from a purely single-species approach to an ecosystem approach. The first coastwide stock assessment of Atlantic menhaden for management used a single-species virtual population analysis (VPA). Subsequent assessments used a forward projecting statistical catch-at-age framework that incorporated estimates of predation mortality from a multispecies VPA while analytical efforts continued toward the development of ecosystem models and explicit ecological reference points (ERPs) for Atlantic menhaden. As an interim step while ecosystem models were being developed, a series of ad hoc measures to preserve Atlantic menhaden biomass for predators were used by managers. In August 2020, the Atlantic States Marine Fisheries Commission formally adopted an ecological modeling framework as a tool to set reference points and harvest limits for the Atlantic menhaden that considers their role as a forage fish. This is the first example of a quantitative ecosystem approach to setting reference points on the United States Atlantic Coast and it represents a significant advance for forage fish management. This case study reviews the history of Atlantic menhaden stock assessments and management, outlines the progress on the current implementation of ERPs for this species, and highlights future research and management needs to improve and expand ecosystem-based fisheries management

Pregabalin-Induced Myopathy in a Double Lung Transplant Recipient

Pregabalin is a gamma-aminobutyric acid (GABA) derivative that was commercially approved by the Food and Drug Administration (FDA) in 2004. It is commonly used in the treatment of diabetic neuropathy, peripheral neuropathy, and spinal cord injury. We present the case of a 36-year-old Caucasian male double lung transplant recipient who presented with an 18-month history of fatigue and muscle weakness. He had elevated creatinine kinase level and his muscle biopsy showed evidence of drug-induced myopathy that improved after the cessation of pregabalin. We present a case of drug-induced myopathy as a rare complication of pregabalin therapy in a double lung transplant recipient

Broccoli (Brassica oleracea) phloem tissue proteome

Background: The transport of sugars, hormones, amino acids, proteins, sugar alcohols, and other organic compounds from the sites of synthesis to the sites of use or storage occurs through the conducting cells of the phloem. To better understand these processes a comprehensive understanding of the proteins involved is required. While a considerable amount of data has been obtained from proteomic analyses of phloem sap, this has mainly served to identify the soluble proteins that are translocated through the phloem network.Results: In order to obtain more comprehensive proteomic data from phloem tissue we developed a simple dissection procedure to isolate phloem tissue from Brassica oleracea. The presence of a high density of phloem sieve elements was confirmed using light microscopy and fluorescently labeled sieve element-specific antibodies. To increase the depth of the proteomic analysis for membrane bound and associated proteins, soluble proteins were extracted first and subsequent extractions were carried out using two different detergents (SDS and CHAPSO). Across all three extractions almost four hundred proteins were identified and each extraction method added to the analysis demonstrating the utility of an approach combining several extraction protocols.Conclusions: The phloem was found to be enriched in proteins associated with biotic and abiotic stress responses and structural proteins. Subsequent expression analysis identified a number of genes that appear to be expressed exclusively or at very high levels in phloem tissue, including genes that are known to express specifically in the phloem as well as novel phloem genes.Peer reviewedBiochemistry and Molecular Biolog

Reaching Inward Not Outward: Marketing via the Internet at the UK 2010 General Election

The Internet has been to date used as a space for simple promotion by political parties; websites present an opportunity for the delivery of non-mediated communication directly to the online audience and nothing more. However, new patterns in usage during campaigns, particularly that of Barack Obama, aided by the technological innovations that fall under the umbrella of Web 2.0, offer new models of online political communication. Through an analysis of the websites and linked online presences of six parties that stood across the UK at the 2010 General Election, we find a dual strategy for Internet campaigning emerging. The persuasive traditions of electioneering remain a feature; however, the key emergent function is one of internal marketing to party supporters and activists. Large sections of party websites are being dedicated to harnessing supporters and converting them to being donators, promoters, and campaigners both online and offline. This suggests that the Internet is increasingly embedded within election communication and online communication strategies are becoming a feature of most of the parties' marketing communication mix. © 2013 Copyright Taylor and Francis Group, LLC

A Dip Into a Deep Well: Online Political Advertisements, Valence, and European Electoral Campaigning

Online political advertisements have become an important element in electoral campaigning throughout the world. At the same time, concepts such as disinformation and manipulation have emerged as a global concern. Although these concepts are distinct from online political ads and data-driven electoral campaigning, they tend to share a similar trait related to valence, the intrinsic attractiveness or averseness of a message. Given this background, the paper examines online political ads by using a dataset collected from Google's transparency reports. The examination is framed to the mid-2019 situation in Europe, including the European Parliament elections in particular. According to the results based on sentiment analysis of the textual ads displayed via Google's advertisement machinery, (i) most of the political ads have expressed positive sentiments, although these vary greatly between (ii) European countries as well as across (iii) European political parties. In addition to these results, the paper contributes to the timely discussion about data-driven electoral campaigning and its relation to politics and democracy

Gene content evolution in the arthropods

Arthropods comprise the largest and most diverse phylum on Earth and play vital roles in nearly every ecosystem. Their diversity stems in part from variations on a conserved body plan, resulting from and recorded in adaptive changes in the genome. Dissection of the genomic record of sequence change enables broad questions regarding genome evolution to be addressed, even across hyper-diverse taxa within arthropods. Using 76 whole genome sequences representing 21 orders spanning more than 500 million years of arthropod evolution, we document changes in gene and protein domain content and provide temporal and phylogenetic context for interpreting these innovations. We identify many novel gene families that arose early in the evolution of arthropods and during the diversification of insects into modern orders. We reveal unexpected variation in patterns of DNA methylation across arthropods and examples of gene family and protein domain evolution coincident with the appearance of notable phenotypic and physiological adaptations such as flight, metamorphosis, sociality, and chemoperception. These analyses demonstrate how large-scale comparative genomics can provide broad new insights into the genotype to phenotype map and generate testable hypotheses about the evolution of animal diversity