Deep Spin-Glass Hysteresis Area Collapse and Scaling in the d=3d=3 ±J\pm J Ising Model

We investigate the dissipative loss in the $\pm J$ Ising spin glass in three dimensions through the scaling of the hysteresis area, for a maximum magnetic field that is equal to the saturation field. We perform a systematic analysis for the whole range of the bond randomness as a function of the sweep rate, by means of frustration-preserving hard-spin mean field theory. Data collapse within the entirety of the spin-glass phase driven adiabatically (i.e., infinitely-slow field variation) is found, revealing a power-law scaling of the hysteresis area as a function of the antiferromagnetic bond fraction and the temperature. Two dynamic regimes separated by a threshold frequency $\omega_c$ characterize the dependence on the sweep rate of the oscillating field. For $\omega < \omega_c$, the hysteresis area is equal to its value in the adiabatic limit $\omega = 0$, while for $\omega > \omega_c$ it increases with the frequency through another randomness-dependent power law.Comment: 6 pages, 6 figure

Strongly Asymmetric Tricriticality of Quenched Random-Field Systems

In view of the recently seen dramatic effect of quenched random bonds on tricritical systems, we have conducted a renormalization-group study on the effect of quenched random fields on the tricritical phase diagram of the spin-1 Ising model in $d=3$. We find that random fields convert first-order phase transitions into second-order, in fact more effectively than random bonds. The coexistence region is extremely flat, attesting to an unusually small tricritical exponent $\beta_u$; moreover, an extreme asymmetry of the phase diagram is very striking. To accomodate this asymmetry, the second-order boundary exhibits reentrance.Comment: revtex, 4 pages, 2 figs, submitted to PR

Hygrothermal Performance Assessments of Traditional Timber-Framed Houses in Turkey by Numerical Analysis

The aim of this research is to evaluate the hygrothermal performances of traditional timber-framed houses’ exterior walls in Turkey to create a base case scenario of hygrothermal behavior as a datum for conservation and restoration projects. There is a unique range of traditional timber-framed houses in Turkey varied according to geographical, social, economic, and cultural characteristics. They are hybrid constructions whereby an infilled timber-framed system is erected on the masonry walls. They are compositions of rectangular studs of wood and infill materials such as adobe, stone, and brick. Most constructed examples may be classified in groups of four depending on infill materials as follows: (1) timber-framed adobe infill, (2) timber-framed brick infill, (3) timber-framed stone infill, and (4) unfilled timber-framed. Within the scope of the research, one example from each type is selected for hygrothermal performance assessments by applying the simulation program DELPHIN 6.1.1. This research is concentrated on the evaluation of hygrothermal performances of the selected types over 4 years (January 01, 2010–January 01, 2014) by investigating the temperature, relative humidity, U-value, and moisture mass model graphics of the cross-section of the wall samples. 2010 was one of the rainiest years and 2013 was one of the less rainy years in the selected locations for the last 10 years. The findings of this paper indicate that when factors such as construction details, materials, and climatic conditions are varied, there may be humidity-based problems in the selected examples. In that case, intersection points of materials, layers, and their relationships should be re-evaluated to improve the hygrothermal performances of the selected walls for conservation and restoration projects

Abscess in Adenomyosis Mimicking a Malignancy in a 54-Year-Old Woman

Background: Although there are a few reports describing abscess formation in endometriotic foci no report of abscess formation arising de novo within adenomyosis appears in the literature. Preoperative diagnosis of adenomyosis is frequently difficult because of non-specific signs and symptoms. Synchronous pelvic pathologies such as leiomyoma, endometrial polyp, endometrial hyperplasia, as well as endometrial cancer may cause differential diagnostic problems. Case: A 54-year-old postmenopausal woman complaining of inguinal pain, nightsweats and hot flashes is presented. Radiologic examinations of the pelvis revealed a 95 × 85 mm leiomyoma-like lesion including a 53 × 43 mmcystic space and 9 × 6 mmpapillary formation within the uterus raising clinical suspicion of malignancy. A total abdominal hysterectomy and bilateral salpingo-oophorectomy were performed accompanied by a frozen section diagnosis. The frozen section revealed an abscess formation arising in a focus of adenomyosis. The postoperative period of the patient was uneventful. Conclusion : The present case, to our knowledge, is the first report representing abscess formation in adenomyosis. Abscess arising within adenomyosis can strongly raise the suspicion of endometrial cancer, particularly if the patient is postmenopausal. If endometrial cancer cannot be ruled out with definitive histopathological diagnosis in the preoperative period, a frozen section becomes mandatory during surgical intervention

Perspective of turkish medicine students on cancer, cancer treatments, palliative care, and oncologists (ares study): A study of the palliative care working committee of the turkish oncology group (TOG)

Cancer is one of the most common causes of death all over the World (Rahib et al. in Cancer Res 74(11):2913–2921, 2014; Silbermann et al. in Ann Oncol 23(Suppl 3):iii15–iii28, 2012). It is crucial to diagnose this disease early by effective screening methods and also it is very important to acknowledge the community on various aspects of this disease such as the treatment methods and palliative care. Not only the oncologists but every medical doctor should be educated well in dealing with cancer patients. Previous studies suggested various opinions on the level of oncology education in medical schools (Pavlidis et al. in Ann Oncol 16(5):840–841, 2005). In this study, the perspectives of medical students on cancer, its treatment, palliative care, and the oncologists were analyzed in relation to their educational status. A multicenter survey analysis was performed on a total of 4224 medical school students that accepted to enter this study in Turkey. After the questions about the demographical characteristics of the students, their perspectives on the definition, diagnosis, screening, and treatment methods of cancer and their way of understanding metastatic disease as well as palliative care were analyzed. The questionnaire includes questions with answers and a scoring system of Likert type 5 (absolutely disagree = 1, completely agree = 5). In the last part of the questionnaire, there were some words to detect what the words “cancer” and “oncologist” meant for the students. The participant students were analyzed in two study groups; “group 1” (n = 1.255) were phases I and II students that had never attended an oncology lesson, and “group 2” (n = 2.969) were phases III to VI students that had attended oncology lessons in the medical school. SPSS v17 was used for the database and statistical analyses. A value of p < 0.05 was noted as statistically significant. Group 1 defined cancer as a contagious disease (p = 0.00025), they believed that early diagnosis was never possible (p = 0.042), all people with a diagnosis of cancer would certainly die (p = 0.044), and chemotherapy was not successful in a metastatic disease (p = 0.003) as compared to group 2. The rate of the students that believed gastric cancer screening was a part of the national screening policy was significantly more in group 1 than in group 2 (p = 0.00014). Group 2 had a higher anxiety level for themselves or their family members to become a cancer patient. Most of the students in both groups defined medical oncologists as warriors (57% in group 1 and 40% in group 2; p = 0.097), and cancer was reminding them of “death” (54% in group 1 and 48% in group 2; p = 0.102). This study suggested that oncology education was useful for the students’ understanding of cancer and related issues; however, the level of oncology education should be improved in medical schools in Turkey. This would be helpful for medical doctors to cope with many aspects of cancer as a major health care problem in this country. © 2018, American Association for Cancer Education

Delocalization Transition of a Rough Adsorption-Reaction Interface

We introduce a new kinetic interface model suitable for simulating adsorption-reaction processes which take place preferentially at surface defects such as steps and vacancies. As the average interface velocity is taken to zero, the self- affine interface with Kardar-Parisi-Zhang like scaling behaviour undergoes a delocalization transition with critical exponents that fall into a novel universality class. As the critical point is approached, the interface becomes a multi-valued, multiply connected self-similar fractal set. The scaling behaviour and critical exponents of the relevant correlation functions are determined from Monte Carlo simulations and scaling arguments.Comment: 4 pages with 6 figures, new comment

Can you really anonymize the donors of genomic data in today’s digital world?

The rapid progress in genome sequencing technologies leads to availability of high amounts of genomic data. Accelerating the pace of biomedical breakthroughs and discoveries necessitates not only collecting millions of genetic samples but also granting open access to genetic databases. However, one growing concern is the ability to protect the privacy of sensitive information and its owner. In this work, we survey a wide spectrum of cross-layer privacy breaching strategies to human genomic data (using both public genomic databases and other public non-genomic data). We outline the principles and outcomes of each technique, and assess its technological complexity and maturation. We then review potential privacy-preserving countermeasure mechanisms for each threat. © Springer International Publishing Switzerland 2016

Whole genome sequencing of Turkish genomes reveals functional private alleles and impact of genetic interactions with Europe, Asia and Africa

Background: Turkey is a crossroads of major population movements throughout history and has been a hotspot of cultural interactions. Several studies have investigated the complex population history of Turkey through a limited set of genetic markers. However, to date, there have been no studies to assess the genetic variation at the whole genome level using whole genome sequencing. Here, we present whole genome sequences of 16 Turkish individuals resequenced at high coverage (32 × -48×). Results: We show that the genetic variation of the contemporary Turkish population clusters with South European populations, as expected, but also shows signatures of relatively recent contribution from ancestral East Asian populations. In addition, we document a significant enrichment of non-synonymous private alleles, consistent with recent observations in European populations. A number of variants associated with skin color and total cholesterol levels show frequency differentiation between the Turkish populations and European populations. Furthermore, we have analyzed the 17q21.31 inversion polymorphism region (MAPT locus) and found increased allele frequency of 31.25% for H1/H2 inversion polymorphism when compared to European populations that show about 25% of allele frequency. Conclusion: This study provides the first map of common genetic variation from 16 western Asian individuals and thus helps fill an important geographical gap in analyzing natural human variation and human migration. Our data will help develop population-specific experimental designs for studies investigating disease associations and demographic history in Turkey. © 2014 Alkan et al

Ecuador Paraiso Escondido virus, a new flavivirus isolated from New World sand flies in Ecuador, is the first representative of a novel clade in the genus flavivirus

A new flavivirus, Ecuador Paraiso Escondido virus (EPEV), named after the village where it was discovered, was isolated from sand flies (Psathyromyia abonnenci, formerly Lutzomyia abonnenci) that are unique to the New World. This represents the first sand fly-borne flavivirus identified in the New World. EPEV exhibited a typical flavivirus genome organization. Nevertheless, the maximum pairwise amino acid sequence identity with currently recognized flaviviruses was 52.8%. Phylogenetic analysis of the complete coding sequence showed that EPEV represents a distinct clade which diverged from a lineage that was ancestral to the nonvectored flaviviruses Entebbe bat virus, Yokose virus, and Sokoluk virus and also the Aedes-associated mosquito-borne flaviviruses, which include yellow fever virus, Sepik virus, Saboya virus, and others. EPEV replicated in C6/36 mosquito cells, yielding high infectious titers, but failed to reproduce either in vertebrate cell lines (Vero, BHK, SW13, and XTC cells) or in suckling mouse brains. This surprising result, which appears to eliminate an association with vertebrate hosts in the life cycle of EPEV, is discussed in the context of the evolutionary origins of EPEV in the New World.The flaviviruses are rarely (if ever) vectored by sand fly species, at least in the Old World. We have identified the first representative of a sand fly-associated flavivirus, Ecuador Paraiso Escondido virus (EPEV), in the New World. EPEV constitutes a novel clade according to current knowledge of the flaviviruses. Phylogenetic analysis of the virus genome showed that EPEV roots the Aedes-associated mosquito-borne flaviviruses, including yellow fever virus. In light of this new discovery, the New World origin of EPEV is discussed together with that of the other flaviviruses