2,273 research outputs found
Estrogenic Compounds Downstream from Three Small Cities in Eastern Nebraska: Occurrence and Biological Effect
Recent studies have detected estrogenic compounds in surface waters in North America and Europe. Furthermore, the presence of estrogenic compounds in surface waters has been attributed, in some cases, to the discharge of wastewater treatment plant (WWTP) effluent. The primary objective of the current study was to determine if WWTP effluent contributes estrogens to the surface waters of Nebraska. A second objective of this study was to determine if estrogens were found in concentrations sufficient enough to manifest feminizing effects on fish. These objectives were satisfied by deploying polar organic chemical integrative samplers (POCIS) and caged fathead minnows at eight field sites. Deployment sites included: three reference sites (Pawnee Creek, the Little Blue River, and the Middle Loup River), two sites upstream of the WWTPs at Grand Island and Columbus, and three sites downstream of the WWTPs at Grand Island, Columbus, and Hastings. Following the seven day deployments, POCIS extracts were analyzed for estrone, 17β-estradiol, estriol and 17α-ethinylestradiol using liquid chromatography tandem mass spectrometry (LC/MS/MS). 17β-estradiol was detected in POCIS from six of the eight field sites with the greatest quantities recovered in POCIS deployed downstream from the Grand Island and Hastings WWTPs. Estrone was detected only in the POCIS deployed downstream from the Grand Island and Hastings WWTPs. Estrogenic effects were detected in caged minnows analyzed for the hepatic mRNA expression of two estrogen- responsive genes, vitellogenin (vg1) and estrogen receptor α (ERα). Fish deployed at the site where the greatest quantities of estrogens were recovered (Hastings) had significantly higher expression of both vg1 and ERα than fish deployed at any of the other sites. These results confirm that WWTP effluent contributes biologically significant levels of estrogens to Nebraska surface waters
Investigating insecticides in water and sediment of the Choapa River, Chile: do they sink or swim?
In Chile, freshwater rivers travel short distances from the Andes Mountains to the Pacific Ocean. The areas immediately adjacent to the rivers are used to produce fruits and vegetables, and it is possible that these areas can contribute insecticides and herbicides to the riverine systems during rainstorm runoff events. The paucity of knowledge about the occurrence and environmental fate of pesticides in these novel systems presents a unique challenge for ecotoxicology. In the Choapa River, we have found that a native pencil catfish, the (Trichomycterus areolatus) exhibits alterations in gene expression. The alterations are occurring in genes that are biomarkers for endocrine function as well as oxidative stress. Given the biological evidence, we sought to determine 1) whether pesticides detected in the Choapa River were consistent with the changes observed in the fish biomarkers, and 2) whether these agrichemicals were predominately found in surface waters or sediment. To address this objective, we collected water and sediment samples from 5 different sites along the Choapa River, then analyzed for a suite of 27 common herbicides, insecticides and their metabolites. Water and sediment samples were prepared onsite then analyzed at the Water Science Lab, University of Nebraska Lincoln, using gas chromatography–mass spectrometry (GC-MS). Preliminary analysis detected the herbicides propazine and metribuzin, as well as the insecticide carbofuran, all of which varied seasonally and spatially within the Choapa River. Finding from our chemical analysis and observations of seasonal and El Nino trends reveal a complex interplay between agrichemical occurrence and river discharge in the Choapa Basin. Additionally, the results of this study illustrate the challenges of analytical environmental chemistry in unique environments, and the importance of appropriate sample schemes of water and sediment
SCHEMA Recombination of a Fungal Cellulase Uncovers a Single Mutation That Contributes Markedly to Stability
A quantitative linear model accurately (R^2 = 0.88) describes the thermostabilities of 54 characterized members of a family of fungal cellobiohydrolase class II (CBH II) cellulase chimeras made by SCHEMA recombination of three fungal enzymes, demonstrating that the contributions of SCHEMA sequence blocks to stability are predominantly additive. Thirty-one of 31 predicted thermostable CBH II chimeras have thermal inactivation temperatures higher than the most thermostable parent CBH II, from Humicola insolens, and the model predicts that hundreds more CBH II chimeras share this superior thermostability. Eight of eight thermostable chimeras assayed hydrolyze the solid cellulosic substrate Avicel at temperatures at least 5 °C above the most stable parent, and seven of these showed superior activity in 16-h Avicel hydrolysis assays. The sequence-stability model identified a single block of sequence that adds 8.5 °C to chimera thermostability. Mutating individual residues in this block identified the C313S substitution as responsible for the entire thermostabilizing effect. Introducing this mutation into the two recombination parent CBH IIs not featuring it (Hypocrea jecorina and H. insolens) decreased inactivation, increased maximum Avicel hydrolysis temperature, and improved long time hydrolysis performance. This mutation also stabilized and improved Avicel hydrolysis by Phanerochaete chrysosporium CBH II, which is only 55–56% identical to recombination parent CBH IIs. Furthermore, the C313S mutation increased total H. jecorina CBH II activity secreted by the Saccharomyces cerevisiae expression host more than 10-fold. Our results show that SCHEMA structure-guided recombination enables quantitative prediction of cellulase chimera thermostability and efficient identification of stabilizing mutations
Stellar alignment of the High Resolution Doppler Imager
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/77037/1/AIAA-26727-328.pd
Optical Structure and Proper-Motion Age of the Oxygen-rich Supernova Remnant 1E 0102-7219 in the Small Magellanic Cloud
We present new optical emission-line images of the young SNR 1E 0102-7219
(E0102) in the SMC obtained with the HST Advanced Camera for Surveys (ACS).
E0102 is a member of the oxygen-rich class of SNRs showing strong oxygen, neon
, and other metal-line emissions in its optical and X-ray spectra, and an
absence of H and He. The progenitor of E0102 may have been a Wolf-Rayet star
that underwent considerable mass loss prior to exploding as a Type Ib/c or
IIL/b SN. The ejecta in this SNR are fast-moving (V > 1000 km/s) and emit as
they are compressed and heated in the reverse shock. In 2003, we obtained
optical [O III], H-alpha, and continuum images with the ACS Wide Field Camera.
The [O III] image captures the full velocity range of the ejecta, and shows
considerable high-velocity emission projected in the middle of the SNR that was
Doppler-shifted out of the narrow F502N bandpass of a previous Wide Field and
Planetary Camera 2 image from 1995. Using these two epochs separated by ~8.5
years, we measure the transverse expansion of the ejecta around the outer rim
in this SNR for the first time at visible wavelengths. From proper-motion
measurements of 12 ejecta filaments, we estimate a mean expansion velocity for
the bright ejecta of ~2000 km/s and an inferred kinematic age for the SNR of
\~2050 +/- 600 years. The age we derive from HST data is about twice that
inferred by Hughes et al.(2000) from X-ray data, though our 1-sigma error bars
overlap. Our proper-motion age is consistent with an independent optical
kinematic age derived by Eriksen et al.(2003) using spatially resolved [O III]
radial-velocity data. We derive an expansion center that lies very close to
X-ray and radio hotspots, which could indicate the presence of a compact
remnant (neutron star or black hole).Comment: 28 pages, 8 figures. Accepted to the Astrophysical Journal, to appear
in 20 April 2006 issue. Full resolution figures are posted at:
http://stevenf.asu.edu/figure
Structure-Guided Directed Evolution of Highly Selective P450-Based Magnetic Resonance Imaging Sensors for Dopamine and Serotonin
New tools that allow dynamic visualization of molecular neural events are important for studying the basis of brain activity and disease. Sensors that permit ligand-sensitive magnetic resonance imaging (MRI) are useful reagents due to the noninvasive nature and good temporal and spatial resolution of MR methods. Paramagnetic metalloproteins can be effective MRI sensors due to the selectivity imparted by the protein active site and the ability to tune protein properties using techniques such as directed evolution. Here, we show that structure-guided directed evolution of the active site of the cytochrome P450‐BM3 heme domain produces highly selective MRI probes with submicromolar affinities for small molecules. We report a new, high‐affinity dopamine sensor as well as the first MRI reporter for serotonin, with which we demonstrate quantification of neurotransmitter release in vitro. We also present a detailed structural analysis of evolved cytochrome P450‐BM3 heme domain lineages to systematically dissect the molecular basis of neurotransmitter binding affinity, selectivity, and enhanced MRI contrast activity in these engineered proteins
The Cosmic Origins Spectrograph
The Cosmic Origins Spectrograph (COS) is a moderate-resolution spectrograph with unprecedented sensitivity that was installed into the Hubble Space Telescope (HST) in May 2009, during HST Servicing Mission 4 (STS-125). We present the design philosophy and summarize the key characteristics of the instrument that will be of interest to potential observers. For faint targets, with flux F(sub lambda) approximates 1.0 X 10(exp -14) ergs/s/cm2/Angstrom, COS can achieve comparable signal to noise (when compared to STIS echelle modes) in 1-2% of the observing time. This has led to a significant increase in the total data volume and data quality available to the community. For example, in the first 20 months of science operation (September 2009 - June 2011) the cumulative redshift pathlength of extragalactic sight lines sampled by COS is 9 times that sampled at moderate resolution in 19 previous years of Hubble observations. COS programs have observed 214 distinct lines of sight suitable for study of the intergalactic medium as of June 2011. COS has measured, for the first time with high reliability, broad Lya absorbers and Ne VIII in the intergalactic medium, and observed the HeII reionization epoch along multiple sightlines. COS has detected the first CO emission and absorption in the UV spectra of low-mass circumstellar disks at the epoch of giant planet formation, and detected multiple ionization states of metals in extra-solar planetary atmospheres. In the coming years, COS will continue its census of intergalactic gas, probe galactic and cosmic structure, and explore physics in our solar system and Galaxy
Core Verbal Autopsy Procedures with Comparative Validation Results from Two Countries
BACKGROUND: Cause-specific mortality statistics remain scarce for the majority of low-income countries, where the highest disease burdens are experienced. Neither facility-based information systems nor vital registration provide adequate or representative data. The expansion of sample vital registration with verbal autopsy procedures represents the most promising interim solution for this problem. The development and validation of core verbal autopsy forms and suitable coding and tabulation procedures are an essential first step to extending the benefits of this method. METHODS AND FINDINGS: Core forms for peri- and neonatal, child, and adult deaths were developed and revised over 12 y through a project of the Tanzanian Ministry of Health and were applied to over 50,000 deaths. The contents of the core forms draw upon and are generally comparable with previously proposed verbal autopsy procedures. The core forms and coding procedures based on the International Statistical Classification of Diseases (ICD) were further adapted for use in China. These forms, the ICD tabulation list, the summary validation protocol, and the summary validation results from Tanzania and China are presented here. CONCLUSIONS: The procedures are capable of providing reasonable mortality estimates as adjudged against stated performance criteria for several common causes of death in two countries with radically different cause structures of mortality. However, the specific causes for which the procedures perform well varied between the two settings because of differences in the underlying prevalence of the main causes of death. These differences serve to emphasize the need to undertake validation studies of verbal autopsy procedures when they are applied in new epidemiological settings
- …