Excessive Memory Usage of the ELLPACK Sparse Matrix Storage Scheme throughout the Finite Element Computations

Sparse matrices are occasionally encountered during solution of various problems by means of numerical methods, particularly the finite element method. ELLPACK sparse matrix storage scheme, one of the most widely used methods due to its implementation ease, is investigated in this study. The scheme uses excessive memory due to its definition. For the conventional finite element method, where the node elements are used, the excessive memory caused by redundant entries in the ELLPACK sparse matrix storage scheme becomes negligible for large scale problems. On the other hand, our analyses show that the redundancy is still considerable for the occasions where facet or edge elements have to be used

Simulation of granular soil behaviour using the bullet physics library

A physics engine is computer software which provides a simulation of certain physical systems, such as rigid body dynamics, soft body dynamics and fluid dynamics. Physics engines were firstly developed for using in animation and gaming industry ; nevertheless, due to fast calculation speed they are attracting more and more attetion from researchers of the engineering fields. Since physics engines are capable of performing fast calculations on multibody rigid dynamic systems, soil particles can be modeled as distinct rigid bodies. However, up to date, it is not clear to what extent they perform accurately in modeling soil behaviour from a geotechnical viewpoint. To investigate this, examples of pluviation and vibration-induced desification were simulated using the physics engine called Bullet physics library. In order to create soil samples, first, randomly shaped polyhedrons, representing gravels, were generated using the Voronoi tessellation approach. Then, particles were pluviated through a funnel into a cylinder. Once the soil particles settled in a static state, the cylinder was subjected to horizontal sinusoidal vibration for a period of 20 seconds. The same procedure for sample perparation was performed in the laboratory. The results of pluviation and vibration tests weere recorded and compared to those of simulations. A good agreement has been found between the results of simulations and laboratory tests. The findings in this study reinforce the idea that physics engines can be employed as a geotechnical engineering simulation tool

Effect of Some Threshing Parameters on Sesame Separation

The threshing section on combine harvester or thresher machine affects grain and stalk separation performance. In this study, effect of some threshing parameters such as drum speed, feed rate and concave open on closed capsules sesame straw sieve in developed threshing unit. Threshing drums used were a rasp bar with tooth type. Three threshing drum speeds of 500, 700 and 900 min-1 (6.5, 9.1, 11.7 m/s) were used to investigations. Three feed rate as 90, 180 and 270 kg/h and three concave open as 20, 35 and 50 mm were used in this study. Four sieves were used for separation of straw. Their mesh numbers are 7, 10, 14 and 18. Results show that the best performance for separation of sesame straw were gave at the maximum drum speeds, minimum feed rates and concave opens experienced in this study

Kahramanmaraş’ta Organik Kırmızıbiber Üretiminde Ekim Nöbetinde Kullanılabilecek Ürünlerin Araştırılması

Bu çalışma 2004–2008 yılları arasında Kahramanmaraş koşullarında organik kırmızıbiber üretiminde kullanılabilecek uygun ekim nöbetini belirlemek amacı ile yürütülmüştür. Araştırmada organik yetiştiricilik prensipleri dikkate alınarak üretim yapılan (1) Biber, (2) Biber-Pamuk (3) Biber-Fasulye-Pamuk, (4) Biber-Mısır-Hıyar-Fasulye ekim nöbeti döngüleri 5 yıl süre ile uygulanmış ve verim ve verim unsurları bakımından konvansiyonel kırmızıbiber üretimi ile karşılaştırılmıştır. Böylelikle konvansiyonel uygulama ile birlikte deneme 5 uygulamadan oluşmuştur. Basit maliyet analizi ve fayda/masraf oranı hesaplanarak uygulamalar ekonomik yönden değerlendirilmiştir. Çalışma sonucunda yıllara göre fayda/masraf oranı değişmiş en yüksek fayda masraf oranları Kırmızıbiber-Fasulye-Pamuk ekim nöbetlerinden elde edilmiştir. Bu ekim nöbeti yaş ve kuru kırmızıbiber verim değerleri bakımından konvansiyonel uygulamaya oldukça yaklaşmıştır. Bölgede organik kırmızı biber üretimi bakımından sorun olabilecek yabancı otlar topalak (Cyperus rotundus L.), Kaynaş (Sorghum halepense L) semizotu (Portulaca oleracea L.) ve Domuz pıtrağı (Xanthium strumarium L.) dır

Uncertainty analysis for seismic hazard in Northern and Central Italy

In this study we examine uncertainty and parametric sensitivity of Peak Ground Acceleration (PGA) and 1-Hz Spectral Acceleration (1-Hz SA) in probabilistic seismic hazard maps (10% probability of exceedance in 50 years) of Northern and Central Italy. The uncertainty in hazard is estimated using a Monte Carlo approach to randomly sample a logic tree that has three input-variables branch points representing alternative values for bvalue, maximum magnitude (Mmax) and attenuation relationships. Uncertainty is expressed in terms of 95% confidence band and Coefficient Of Variation (COV). The overall variability of ground motions and their sensitivity to each parameter of the logic tree are investigated. The largest values of the overall 95% confidence band are around 0.15 g for PGA in the Friuli and Northern Apennines regions and around 0.35 g for 1-Hz SA in the Central Apennines. The sensitivity analysis shows that the largest contributor to seismic hazard variability is uncertainty in the choice of ground-motion attenuation relationships, especially in the Friuli Region (∼0.10 g) for PGA and in the Friuli and Central Apennines regions (∼0.15 g) for 1-Hz SA. This is followed by the variability of the b-value: its main contribution is evident in the Friuli and Central Apennines regions for both 1-Hz SA (∼0.15 g) and PGA (∼0.10 g). We observe that the contribution of Mmax to seismic hazard variability is negligible, at least for 10% exceedance in 50-years hazard. The overall COV map for PGA shows that the uncertainty in the hazard is larger in the Friuli and Northern Apennine regions, around 20-30%, than the Central Apennines and Northwestern Italy, around 10-20%. The overall uncertainty is larger for the 1-Hz SA map and reaches 50- 60% in the Central Apennines and Western Alps

The 2012 Ferrara seismic sequence: Regional crustal structure, earthquake sources, and seismic hazard

Inadequate seismic design codes can be dangerous, particularly when they underestimate the true hazard. In this study we use data from a sequence of moderate-sized earthquakes in northeast Italy to validate and test a regional wave propagation model which, in turn, is used to under- stand some weaknesses of the current design spectra. Our velocity model, while regionalized and somewhat ad hoc, is consistent with geophysical observations and the local geology. In the 0.02–0.1 Hz band, this model is validated by using it to calculate moment tensor solutions of 20 earth- quakes (5.6 MW 3.2) in the 2012 Ferrara, Italy, seismic sequence. The seismic spectra observed for the relatively small main shock significantly exceeded the design spectra to be used in the area for critical structures. Observations and synthetics reveal that the ground motions are dominated by long-duration surface waves, which, apparently, the design codes do not adequately anticipate. In light of our results, the present seismic hazard assessment in the entire Pianura Padana, including the city of Milan, needs to be re-evaluated. Citation: Malagnini, L., R. B. Herrmann, I. Munafò, M. Buttinelli, M. Anselmi, A. Akinci, and E. Boschi (2012), The 2012 Ferrara seismic sequence: Regional crustal structure, earthquake sources, and seismic hazard, Geophys. Res. Lett., 39, L19302, doi:10.1029/ 2012GL053214

Effect of time-dependence on probabilistic seismic hazard maps and deaggregation for the central apennines, Italy

We produce probabilistic seismic hazard assessments for the Central Apennines, Italy, using time-dependent models that are characterized using a Brownian Passage Time (BPT) recurrence model. Using aperiodicity parameters,  of 0.3, 0.5, and 0.7, we examine the sensitivity of the probabilistic ground motion and its deaggregation to these parameters. For the seismic source model we incorporate both smoothed historical seismicity over the area and geological information on faults. We use the maximum magnitude model for the fault sources together with a uniform probability of rupture along the fault (floating fault model) to model fictitious faults to account for earthquakes that cannot be correlated with known geologic structural segmentation. We show maps for peak ground acceleration (PGA) and 1.0-Hz spectral acceleration (SA1) on rock having 10% probability of exceedence (PE) in 50 years. We produce maps to compare the separate contributions of smoothed seismicity and fault components. In addition we construct maps that show sensitivity of the hazard for different  parameters and the Poisson model. For the Poisson model, the addition of fault sources to the smoothed seismicity raises the hazard by 50 % at locations where the smoothed seismicity contributes the highest hazard, and up to 100 % at locations where the hazard from smoothed seismicity is low. For the strongest aperiodicity parameter (smallest ), the hazard may further increase 60-80 % or more or may decrease by as much as 20 %, depending on the recency of the last event on the fault that dominates the hazard at a given site. In order to present the most likely earthquake magnitude and/or the most likely source-site distance for scenario studies, we deaggregate the seismic hazard for SA1 and PGA for two important cities (Roma and l’Aquila) . For PGA, both locations show the predominance of local sources, having magnitudes of about 5.3 and 6.5 respectively. For SA1 at a site in Rome, there is significant contribution from local smoothed seismicity, and an additional contribution from the more distant Apennine faults having magnitude around 6.8. For l’Aquila, the predominant sources remain local. In order to show the variety of impact of different  values we also obtained deaggregations for another three sites. In general, as  decreases (periodicity increases), the deaggregation indicates that the hazard is highest near faults with the highest earthquakes rates. This effect is strongest for the long-period (1 s) ground motions

Resistivity studies under hydrostatic pressure on a low-resistance variant of the quasi-2D organic superconductor kappa-(BEDT-TTF)2Cu[N(CN)2]Br: quest for intrinsic scattering contributions

Resistivity measurements have been performed on a low (LR)- and high (HR)-resistance variant of the kappa-(BEDT-TTF)_2Cu[N(CN)_2]Br superconductor. While the HR sample was synthesized following the standard procedure, the LR crystal is a result of a somewhat modified synthesis route. According to their residual resistivities and residual resistivity ratios, the LR crystal is of distinctly superior quality. He-gas pressure was used to study the effect of hydrostatic pressure on the different transport regimes for both variants. The main results of these comparative investigations are (i) a significant part of the inelastic-scattering contribution, which causes the anomalous rho(T) maximum in standard HR crystals around 90 K, is sample dependent, i.e. extrinsic in nature, (ii) the abrupt change in rho(T) at T* approx. 40 K from a strongly temperature-dependent behavior at T > T* to an only weakly T-dependent rho(T) at T < T* is unaffected by this scattering contribution and thus marks an independent property, most likely a second-order phase transition, (iii) both variants reveal a rho(T) proportional to AT^2 dependence at low temperatures, i.e. for T_c < T < T_0, although with strongly sample-dependent coefficients A and upper bounds for the T^2 behavior measured by T_0. The latter result is inconsistent with the T^2 dependence originating from coherent Fermi-liquid excitations.Comment: 8 pages, 6 figure

Ocular surface epithelia contain ABCG2-dependent side population cells exhibiting features associated with stem cells.

When cell populations are incubated with the DNA-binding dye Hoechst 33342 and subjected to flow cytometry analysis for Hoechst 33342 emissions, active efflux of the dye by the ABCG2/BCRP1 transporter causes certain cells to appear as a segregated cohort, known as a side population (SP). Stem cells from several tissues have been shown to possess the SP phenotype. As the lack of specific surface markers has hindered the isolation and subsequent biochemical characterization of epithelial stem cells this study sought to determine the existence of SP cells and expression of ABCG2 in the epithelia of the ocular surface and evaluate whether such SP cells had features associated with epithelial stem cells. Human and rabbit limbal-corneal and conjunctival epithelial cells were incubated with Hoechst 33342, and analyzed and sorted by flow cytometry. Sorted cells were subjected to several tests to determine whether the isolated SP cells displayed features consistent with the stem cell phenotype. Side populations amounting to \u3c1% of total cells, which were sensitive to the ABCG2-inhibitor fumitremorgin C, were found in the conjunctival and limbal epithelia, but were absent from the stem cell-free corneal epithelium. Immunohistochemistry was used to establish the spatial expression pattern of ABCG2. The antigen was detected in clusters of conjunctival and limbal epithelia basal cells but was not present in the corneal epithelium. SP cells were characterized by extremely low light side scattering and contained a high percentage of cells that: showed slow cycling prior to tissue collection; exhibited an initial delay in proliferation after culturing; and displayed clonogenic capacity and resistance to phorbol-induced differentiation; all features that are consistent with a stem cell phenotype