Close entrainment of massive molecular gas flows by radio bubbles in the central galaxy of Abell 1795

We present new ALMA observations tracing the morphology and velocity structure of the molecular gas in the central galaxy of the cluster Abell 1795. The molecular gas lies in two filaments that extend 5–7 kpc to the N and S from the nucleus and project exclusively around the outer edges of two inner radio bubbles. Radio jets launched by the central active galactic nucleus have inflated bubbles filled with relativistic plasma into the hot atmosphere surrounding the central galaxy. The N filament has a smoothly increasing velocity gradient along its length from the central galaxy’s systemic velocity at the nucleus to −370kms−1 −370kms−1 , the average velocity of the surrounding galaxies, at the furthest extent. The S filament has a similarly smooth but shallower velocity gradient and appears to have partially collapsed in a burst of star formation. The close spatial association with the radio lobes, together with the ordered velocity gradients and narrow velocity dispersions, shows that the molecular filaments are gas flows entrained by the expanding radio bubbles. Assuming a Galactic XCO factor, the total molecular gas mass is 3.2 ± 0.2 × 109 M⊙. More than half lies above the N radio bubble. Lifting the molecular clouds appears to require an infeasibly efficient coupling between the molecular gas and the radio bubble. The energy required also exceeds the mechanical power of the N radio bubble by a factor of 2. Stimulated feedback, where the radio bubbles lift low-entropy X-ray gas that becomes thermally unstable and rapidly cools in situ, provides a plausible model. Multiple generations of radio bubbles are required to lift this substantial gas mass. The close morphological association then indicates that the cold gas either moulds the newly expanding bubbles or is itself pushed aside and shaped as they inflate

Quasiclassical Theory of Spontaneous Currents at Surfaces and Interfaces of d-Wave Superconductors

We investigate the properties of spontaneous currents generated at surfaces and interfaces of d-wave superconductors using the self-consistent quasiclassical Eilenberger equations. The influence of the roughness and reflectivity of the boundaries on the spontaneous current are studied. We show that these have very different effects at the surfaces compared to the interfaces, which reflects the different nature of the time reversal symmetry breaking states in these two systems. We find a signature of the ``anomalous proximity effect'' at rough d-wave interfaces. We also show that the existence of a subdominant order parameter, which is necessary for time reversal symmetry breaking at the surface, suppresses the spontaneous current generation due to proximity effect at the interface between two superconductors. We associate orbital moments to the spontaneous currents to explain the ``superscreening'' effect, which seems to be present at all ideal d-wave surfaces and interfaces, where d_{xy} is the favorite subdominant symmetry.Comment: 13 pages, 17 postscript figure

Studies of modern Italian dog populations reveal multiple patterns for domestic breed evolution

Through thousands of years of breeding and strong human selection, the dog (Canis lupus familiaris) exists today within hundreds of closed populations throughout the world, each with defined phenotypes. A singular geographic region with broad diversity in dog breeds presents an interesting opportunity to observe potential mechanisms of breed formation. Italy claims 14 internationally recognized dog breeds, with numerous additional local varieties. To determine the relationship among Italian dog populations, we integrated genetic data from 263 dogs representing 23 closed dog populations from Italy, seven Apennine gray wolves, and an established dataset of 161 globally recognized dog breeds, applying multiple genetic methods to characterize the modes by which breeds are formed within a single geographic region. Our consideration of each of five genetic analyses reveals a series of development events that mirror historical modes of breed formation, but with variations unique to the codevelopment of early dog and human populations. Using 142,840 genome-wide SNPs and a dataset of 1,609 canines, representing 182 breeds and 16 wild canids, we identified breed development routes for the Italian breeds that included divergence from common populations for a specific purpose, admixture of regional stock with that from other regions, and isolated selection of local stock with specific attributes

Gravitational Radiation From Cosmological Turbulence

An injection of energy into the early Universe on a given characteristic length scale will result in turbulent motions of the primordial plasma. We calculate the stochastic background of gravitational radiation arising from a period of cosmological turbulence, using a simple model of isotropic Kolmogoroff turbulence produced in a cosmological phase transition. We also derive the gravitational radiation generated by magnetic fields arising from a dynamo operating during the period of turbulence. The resulting gravitational radiation background has a maximum amplitude comparable to the radiation background from the collision of bubbles in a first-order phase transition, but at a lower frequency, while the radiation from the induced magnetic fields is always subdominant to that from the turbulence itself. We briefly discuss the detectability of such a signal.Comment: 20 pages. Corrections for an errant factor of 2 in all the gravity wave characteristic amplitudes. Accepted for publication in Phys. Rev.

Impact of Chlamydia trachomatis in the reproductive setting: British Fertility Society Guidelines for practice

Chlamydia trachomatis infection of the genital tract is the most common sexually transmitted infection and has a world-wide distribution. The consequences of infection have an adverse effect on the reproductive health of women and are a common cause of infertility. Recent evidence also suggests an adverse effect on male reproduction. There is a need to standardise the approach in managing the impact of C. trachomatis infection on reproductive health. We have surveyed current UK practice towards screening and management of Chlamydia infections in the fertility setting. We found that at least 90% of clinicians surveyed offered screening. The literature on this topic was examined and revealed a paucity of solid evidence for estimating the risks of long-term reproductive sequelae following lower genital tract infection with C. trachomatis. The mechanism for the damage that occurs after Chlamydial infections is uncertain. However, instrumentation of the uterus in women with C. trachomatis infection is associated with a high risk of pelvic inflammatory disease, which can be prevented by appropriate antibiotic treatment and may prevent infected women from being at increased risk of the adverse sequelae, such as ectopic pregnancy and tubal factor infertility. Recommendations for practice have been proposed and the need for further studies is identified

TRY plant trait database – enhanced coverage and open access

Plant traits—the morphological, anatomical, physiological, biochemical and phenological characteristics of plants—determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait‐based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits—almost complete coverage for ‘plant growth form’. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait–environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives

Universal DNA methylation age across mammalian tissues

DATA AVAILABILITY STATEMENT : The individual-level data from the Mammalian Methylation Consortium can be accessed from several online locations. All data from the Mammalian Methylation Consortium are posted on Gene Expression Omnibus (complete dataset, GSE223748). Subsets of the datasets can also be downloaded from accession numbers GSE174758, GSE184211, GSE184213, GSE184215, GSE184216, GSE184218, GSE184220, GSE184221, GSE184224, GSE190660, GSE190661, GSE190662, GSE190663, GSE190664, GSE174544, GSE190665, GSE174767, GSE184222, GSE184223, GSE174777, GSE174778, GSE173330, GSE164127, GSE147002, GSE147003, GSE147004, GSE223943 and GSE223944. Additional details can be found in Supplementary Note 2. The mammalian data can also be downloaded from the Clock Foundation webpage: https://clockfoundation.org/MammalianMethylationConsortium. The mammalian methylation array is available through the non-profit Epigenetic Clock Development Foundation (https://clockfoundation.org/). The manifest file of the mammalian array and genome annotations of CpG sites can be found on Zenodo (10.5281/zenodo.7574747). All other data supporting the findings of this study are available from the corresponding author upon reasonable request. The chip manifest files, genome annotations of CpG sites and the software code for universal pan-mammalian clocks can be found on GitHub95 at https://github.com/shorvath/MammalianMethylationConsortium/tree/v2.0.0. The individual R code for the universal pan-mammalian clocks, EWAS analysis and functional enrichment studies can be also found in the Supplementary Code.SUPPLEMENTARY MATERIAL 1 : Supplementary Tables 1–3 and Notes 1–6.SUPPLEMENTARY MATERIAL 2 : Reporting SummarySUPPLEMENTARY MATERIAL 3 : Supplementary Data 1–14.SUPPLEMENTARY MATERIAL 4 : Supplementary Code.Aging, often considered a result of random cellular damage, can be accurately estimated using DNA methylation profiles, the foundation of pan-tissue epigenetic clocks. Here, we demonstrate the development of universal pan-mammalian clocks, using 11,754 methylation arrays from our Mammalian Methylation Consortium, which encompass 59 tissue types across 185 mammalian species. These predictive models estimate mammalian tissue age with high accuracy (r > 0.96). Age deviations correlate with human mortality risk, mouse somatotropic axis mutations and caloric restriction. We identified specific cytosines with methylation levels that change with age across numerous species. These sites, highly enriched in polycomb repressive complex 2-binding locations, are near genes implicated in mammalian development, cancer, obesity and longevity. Our findings offer new evidence suggesting that aging is evolutionarily conserved and intertwined with developmental processes across all mammals.https://www.nature.com/nataginghj2024Zoology and EntomologySDG-15:Life on lan

Radiative efficiency, variability and Bondi accretion on to massive black holes: the transition from radio AGN to quasars in brightest cluster galaxies

We examine unresolved nuclear X-ray sources in 57 brightest cluster galaxies to study the relationship between nuclear X-ray emission and accretion on to supermassive black holes. The majority of the clusters in our sample have prominent X-ray cavities embedded in the surrounding hot atmospheres, which we use to estimate mean jet power and average accretion rate on to the supermassive black holes over the past several hundred Myr. We find that roughly half of the sample have detectable nuclear X-ray emission. The nuclear X-ray luminosity is correlated with average accretion rate determined using X-ray cavities, which is consistent with the hypothesis that nuclear X-ray emission traces ongoing accretion. The results imply that jets in systems that have experienced recent active galactic nucleus (AGN) outbursts, in the last ∼107 yr, are ‘on’ at least half of the time. Nuclear X-ray sources become more luminous with respect to the mechanical jet power as the mean accretion rate rises. We show that nuclear radiation exceeds the jet power when the mean accretion rate rises above a few per cent of the Eddington rate, or a power output of ∼1045ergs−1, where the AGN apparently transitions to a quasar. The nuclear X-ray emission from three objects (A2052, Hydra A, M84) varies by factors of 2–10 on time-scales of 6 months to 10 years. If variability at this level is a common phenomenon, it can account for much of the scatter in the relationship between mean accretion rate and nuclear X-ray luminosity. We find no significant change in the spectral energy distribution as a function of luminosity in the variable objects. The nuclear X-ray luminosity is consistent with emission from either a jet, an advection-dominated accretion flow, or a combination of the two, although other origins are possible. We also consider the longstanding problem of whether jets are powered by the accretion of cold circumnuclear gas or nearly spherical inflows of hot keV gas. For a subset of 13 nearby systems in our sample, we re-examine the relationship between the jet power and the Bondi accretion rate. The results indicate weaker evidence for a trend between Bondi accretion and jet power, due to uncertainties in the cavity volumes and gas densities at the Bondi radius. We suggest that cold gas fuelling could be a likely source of accretion power in these objects; however, we cannot rule out Bondi accretion, which could play a significant role in low-power jets

Mass Distribution in Galaxy Cluster Cores

Many processes within galaxy clusters, such as those believed to govern the onset of thermally unstable cooling and active galactic nucleus feedback, are dependent upon local dynamical timescales. However, accurate mapping of the mass distribution within individual clusters is challenging, particularly toward cluster centers where the total mass budget has substantial radially dependent contributions from the stellar (M *), gas (M gas), and dark matter (M DM) components. In this paper we use a small sample of galaxy clusters with deep Chandra observations and good ancillary tracers of their gravitating mass at both large and small radii to develop a method for determining mass profiles that span a wide radial range and extend down into the central galaxy. We also consider potential observational pitfalls in understanding cooling in hot cluster atmospheres, and find tentative evidence for a relationship between the radial extent of cooling X-ray gas and nebular Hα emission in cool-core clusters. At large radii the entropy profiles of our clusters agree with the baseline power law of K ∝ r 1.1 expected from gravity alone. At smaller radii our entropy profiles become shallower but continue with a power law of the form K ∝ r 0.67 down to our resolution limit. Among this small sample of cool-core clusters we therefore find no support for the existence of a central flat "entropy floor.