Inter-laboratory comparison of fission track confined length and etch figure measurements in apatite

Apatite fission-track length and etch figure data are powerful tools for obtaining thermal history information, but both require human analysts making manual measurements and reproducibility is not assured. We report the results of an inter-laboratory study designed to clarify areas of congruence and divergence for these measurements and provide a basis for evaluating best practices to enhance intercompatibility of data sets. Four samples of megacrystic apatite from Durango, Mexico, with induced tracks, one unnannealed and three thermally annealed by varying amounts, were distributed internationally. In all, 55 analysts in 30 laboratory groups participated in the experiment. Relative mean track lengths among the samples were consistent across all analysts, but measurements for each sample showed scatter among labs and analysts considerably in excess of statistical expectation. Normalizing measurements of annealed samples using the unannealed sample improved consistency, as did normalizing for track angle using c-axis projection. Etch figure data also showed variability beyond statistical expectation, and consistency was improved by normalizing. Based on these data we recommend rigorous analyst training for length and etch figure measurement that includes measurement of standards, and that each analyst’s data on unknowns be normalized by that analyst’s own measurements on standards when using thermal history inverse modeling as part of the interpretation process

An Extreme Solar Event of 20 January 2005: Properties of the Flare and the Origin of Energetic Particles

The extreme solar and SEP event of 20 January 2005 is analyzed from two perspectives. Firstly, we study features of the main phase of the flare, when the strongest emissions from microwaves up to 200 MeV gamma-rays were observed. Secondly, we relate our results to a long-standing controversy on the origin of SEPs arriving at Earth, i.e., acceleration in flares, or shocks ahead of CMEs. All emissions from microwaves up to 2.22 MeV line gamma-rays during the main flare phase originated within a compact structure located just above sunspot umbrae. A huge radio burst with a frequency maximum at 30 GHz was observed, indicating the presence of a large number of energetic electrons in strong magnetic fields. Thus, protons and electrons responsible for flare emissions during its main phase were accelerated within the magnetic field of the active region. The leading, impulsive parts of the GLE, and highest-energy gamma-rays identified with pi^0-decay emission, are similar and correspond in time. The origin of the pi^0-decay gamma-rays is argued to be the same as that of lower energy emissions. We estimate the sky-plane speed of the CME to be 2000-2600 km/s, i.e., high, but of the same order as preceding non-GLE-related CMEs from the same active region. Hence, the flare itself rather than the CME appears to determine the extreme nature of this event. We conclude that the acceleration, at least, to sub-relativistic energies, of electrons and protons, responsible for both the flare emissions and the leading spike of SEP/GLE by 07 UT, are likely to have occurred simultaneously within the flare region. We do not rule out a probable contribution from particles accelerated in the CME-driven shock for the leading GLE spike, which seemed to dominate later on.Comment: 34 pages, 14 Postscript figures. Solar Physics, accepted. A typo corrected. The original publication is available at http://www.springerlink.co

Origin of the submillimeter radio emission during the time-extended phase of a solar flare

Solar flares observed in the 200-400 GHz radio domain may exhibit a slowly varying and time-extended component which follows a short (few minutes) impulsive phase and which lasts for a few tens of minutes to more than one hour. The few examples discussed in the literature indicate that such long-lasting submillimeter emission is most likely thermal bremsstrahlung. We present a detailed analysis of the time-extended phase of the 2003 October 27 (M6.7) flare, combining 1-345 GHz total-flux radio measurements with X-ray, EUV, and H{\alpha} observations. We find that the time-extended radio emission is, as expected, radiated by thermal bremsstrahlung. Up to 230 GHz, it is entirely produced in the corona by hot and cool materials at 7-16 MK and 1-3 MK, respectively. At 345 GHz, there is an additional contribution from chromospheric material at a few 10^4 K. These results, which may also apply to other millimeter-submillimeter radio events, are not consistent with the expectations from standard semi-empirical models of the chromosphere and transition region during flares, which predict observable radio emission from the chromosphere at all frequencies where the corona is transparent.Comment: 27 pages, 7 figure

The evolution of language: a comparative review

For many years the evolution of language has been seen as a disreputable topic, mired in fanciful "just so stories" about language origins. However, in the last decade a new synthesis of modern linguistics, cognitive neuroscience and neo-Darwinian evolutionary theory has begun to make important contributions to our understanding of the biology and evolution of language. I review some of this recent progress, focusing on the value of the comparative method, which uses data from animal species to draw inferences about language evolution. Discussing speech first, I show how data concerning a wide variety of species, from monkeys to birds, can increase our understanding of the anatomical and neural mechanisms underlying human spoken language, and how bird and whale song provide insights into the ultimate evolutionary function of language. I discuss the ‘‘descended larynx’ ’ of humans, a peculiar adaptation for speech that has received much attention in the past, which despite earlier claims is not uniquely human. Then I will turn to the neural mechanisms underlying spoken language, pointing out the difficulties animals apparently experience in perceiving hierarchical structure in sounds, and stressing the importance of vocal imitation in the evolution of a spoken language. Turning to ultimate function, I suggest that communication among kin (especially between parents and offspring) played a crucial but neglected role in driving language evolution. Finally, I briefly discuss phylogeny, discussing hypotheses that offer plausible routes to human language from a non-linguistic chimp-like ancestor. I conclude that comparative data from living animals will be key to developing a richer, more interdisciplinary understanding of our most distinctively human trait: language

Whole-genome sequencing reveals host factors underlying critical COVID-19

Critical COVID-19 is caused by immune-mediated inflammatory lung injury. Host genetic variation influences the development of illness requiring critical care1 or hospitalization2,3,4 after infection with SARS-CoV-2. The GenOMICC (Genetics of Mortality in Critical Care) study enables the comparison of genomes from individuals who are critically ill with those of population controls to find underlying disease mechanisms. Here we use whole-genome sequencing in 7,491 critically ill individuals compared with 48,400 controls to discover and replicate 23 independent variants that significantly predispose to critical COVID-19. We identify 16 new independent associations, including variants within genes that are involved in interferon signalling (IL10RB and PLSCR1), leucocyte differentiation (BCL11A) and blood-type antigen secretor status (FUT2). Using transcriptome-wide association and colocalization to infer the effect of gene expression on disease severity, we find evidence that implicates multiple genes—including reduced expression of a membrane flippase (ATP11A), and increased expression of a mucin (MUC1)—in critical disease. Mendelian randomization provides evidence in support of causal roles for myeloid cell adhesion molecules (SELE, ICAM5 and CD209) and the coagulation factor F8, all of which are potentially druggable targets. Our results are broadly consistent with a multi-component model of COVID-19 pathophysiology, in which at least two distinct mechanisms can predispose to life-threatening disease: failure to control viral replication; or an enhanced tendency towards pulmonary inflammation and intravascular coagulation. We show that comparison between cases of critical illness and population controls is highly efficient for the detection of therapeutically relevant mechanisms of disease