Effective Confinement as Origin of the Equivalence of Kinetic Temperature and Fluctuation-Dissipation Ratio in a Dense Shear Driven Suspension

We study response and velocity autocorrelation functions for a tagged particle in a shear driven suspension governed by underdamped stochastic dynamics. We follow the idea of an effective confinement in dense suspensions and exploit a time-scale separation between particle reorganization and vibrational motion. This allows us to approximately derive the fluctuation-dissipation theorem in a "hybrid" form involving the kinetic temperature as an effective temperature and an additive correction term. We show numerically that even in a moderately dense suspension the latter is negligible. We discuss similarities and differences with a simple toy model, a single trapped particle in shear flow

Robust formation of morphogen gradients

We discuss the formation of graded morphogen profiles in a cell layer by nonlinear transport phenomena, important for patterning developing organisms. We focus on a process termed transcytosis, where morphogen transport results from binding of ligands to receptors on the cell surface, incorporation into the cell and subsequent externalization. Starting from a microscopic model, we derive effective transport equations. We show that, in contrast to morphogen transport by extracellular diffusion, transcytosis leads to robust ligand profiles which are insensitive to the rate of ligand production

Magnetic Excitations in NpCoGa5

We report the results of inelastic neutron scattering experiments on NpCoGa$_{5}$, an isostructural analogue of the PuCoGa$_{5}$ superconductor. Two energy scales characterize the magnetic response in the antiferromagnetic phase. One is related to a non-dispersive excitation between two crystal field levels. The other at lower energies corresponds to dispersive fluctuations emanating from the magnetic zone center. The fluctuations persist in the paramagnetic phase also, although weaker in intensity. This supports the possibility that magnetic fluctuations are present in PuCoGa$_{5}$, where unconventional d-wave superconductivity is achieved in the absence of magnetic order.Comment: 4 pages, 5 figure

Towards an English-Spanish version of the Comprehensive Transboundary International Water Quality Management Agreement

The aim of this communication is to discuss strategies for, and progress achieved in transboundary water quality management. The Comprehensive Transboundary Water Quality Management Agreement with Guidelines for Development of a Management Plan, Standards, and Criteria. (ASCE/EWRI 33-09). The purpose of this Agreement is to provide a framework for governments to adopt or modify comprehensive water quality planning and management mechanisms of shared water resources. The Spanish version of the Agreement, completed by the ASCE/EWRI Border International Water Quality Standards Committee (BIWQ SC) Translation Ad Hoc Group, allows the scope of this Framework along and across Spanish speaking political boundaries. This version includes some updates balloted by the Committee to ensure that all factors involved in the sharing and management of water resources are considered in the development of the Agreement, so that it can accommodate the current realities of the boundary governments. The original version of the Agreement (ASCE/EWRI 33-09) is being revised and will be replaced in the coming months by the ASCE/EWRI 33-16. The ASCE/EWRI 33-16 contains the most current model for comprehensive water quality planning and management of shared water resources. It underlines the importance of governmental cooperation to alleviate causes of present and future disagreement and promotes the development of common strategies to use, manage and protect shared water resources. The ASCE/EWRI 33-16 is an agreement to be used, modified, and enhanced through every government on an international scale and in a variety of geopolitical settings

When it Pays to Rush: Interpreting Morphogen Gradients Prior to Steady-State

During development, morphogen gradients precisely determine the position of gene expression boundaries despite the inevitable presence of fluctuations. Recent experiments suggest that some morphogen gradients may be interpreted prior to reaching steady-state. Theoretical work has predicted that such systems will be more robust to embryo-to-embryo fluctuations. By analysing two experimentally motivated models of morphogen gradient formation, we investigate the positional precision of gene expression boundaries determined by pre-steady-state morphogen gradients in the presence of embryo-to-embryo fluctuations, internal biochemical noise and variations in the timing of morphogen measurement. Morphogens that are direct transcription factors are found to be particularly sensitive to internal noise when interpreted prior to steady-state, disadvantaging early measurement, even in the presence of large embryo-to-embryo fluctuations. Morphogens interpreted by cell-surface receptors can be measured prior to steady-state without significant decrease in positional precision provided fluctuations in the timing of measurement are small. Applying our results to experiment, we predict that Bicoid, a transcription factor morphogen in Drosophila, is unlikely to be interpreted prior to reaching steady-state. We also predict that Activin in Xenopus and Nodal in zebrafish, morphogens interpreted by cell-surface receptors, can be decoded in pre-steady-state.Comment: 18 pages, 3 figure

Mobility and Diffusion of a Tagged Particle in a Driven Colloidal Suspension

We study numerically the influence of density and strain rate on the diffusion and mobility of a single tagged particle in a sheared colloidal suspension. We determine independently the time-dependent velocity autocorrelation functions and, through a novel method, the response functions with respect to a small force. While both the diffusion coefficient and the mobility depend on the strain rate the latter exhibits a rather weak dependency. Somewhat surprisingly, we find that the initial decay of response and correlation functions coincide, allowing for an interpretation in terms of an 'effective temperature'. Such a phenomenological effective temperature recovers the Einstein relation in nonequilibrium. We show that our data is well described by two expansions to lowest order in the strain rate.Comment: submitted to EP

Evolution of age and length at maturation of Alaskan salmon under size-selective harvest

Spatial and temporal trends and variation in life-history traits, including age and length at maturation, can be influenced by environmental and anthropogenic processes, including size-selective exploitation. Spawning adults in many wild Alaskan sockeye salmon populations have become shorter at a given age over the past half-century, but their age composition has not changed. These fish have been exploited by a gillnet fishery since the late 1800s that has tended to remove the larger fish. Using a rare, long-term dataset, we estimated probabilistic maturation reaction norms (PMRNs) for males and females in nine populations in two basins and correlated these changes with fishery size selection and intensity to determine whether such selection contributed to microevolutionary changes in maturation length. PMRN midpoints decreased in six of nine populations for both sexes, consistent with the harvest. These results support the hypothesis that environmental changes in the ocean (likely from competition) combined with adaptive microevolution (decreased PMRNs) have produced the observed life-history patterns. PMRNs did not decrease in all populations, and we documented differences in magnitude and consistency of size selection and exploitation rates among populations. Incorporating evolutionary considerations and tracking further changes in life-history traits can support continued sustainable exploitation and productivity in these and other exploited natural resources

Au-Ag template stripped pattern for scanning probe investigations of DNA arrays produced by Dip Pen Nanolithography

We report on DNA arrays produced by Dip Pen Nanolithography (DPN) on a novel Au-Ag micro patterned template stripped surface. DNA arrays have been investigated by atomic force microscopy (AFM) and scanning tunnelling microscopy (STM) showing that the patterned template stripped substrate enables easy retrieval of the DPN-functionalized zone with a standard optical microscope permitting a multi-instrument and multi-technique local detection and analysis. Moreover the smooth surface of the Au squares (abput 5-10 angstrom roughness) allows to be sensitive to the hybridization of the oligonucleotide array with label-free target DNA. Our Au-Ag substrates, combining the retrieving capabilities of the patterned surface with the smoothness of the template stripped technique, are candidates for the investigation of DPN nanostructures and for the development of label free detection methods for DNA nanoarrays based on the use of scanning probes.Comment: Langmuir (accepted

Development of Readout Interconnections for the Si-W Calorimeter of SiD

The SiD collaboration is developing a Si-W sampling electromagnetic calorimeter, with anticipated application for the International Linear Collider. Assembling the modules for such a detector will involve special bonding technologies for the interconnections, especially for attaching a silicon detector wafer to a flex cable readout bus. We review the interconnect technologies involved, including oxidation removal processes, pad surface preparation, solder ball selection and placement, and bond quality assurance. Our results show that solder ball bonding is a promising technique for the Si-W ECAL, and unresolved issues are being addressed.Comment: 8 pages + title, 6 figure