An open and extensible framework for spatially explicit land use change modelling in R: the lulccR package (0.1.0)

Land use change has important consequences for biodiversity and the sustainability of ecosystem services, as well as for global environmental change. Spatially explicit land use change models improve our understanding of the processes driving change and make predictions about the quantity and location of future and past change. Here we present the lulccR package, an object-oriented framework for land use change modelling written in the R programming language. The contribution of the work is to resolve the following limitations associated with the current land use change modelling paradigm: (1) the source code for model implementations is frequently unavailable, severely compromising the reproducibility of scientific results and making it impossible for members of the community to improve or adapt models for their own purposes; (2) ensemble experiments to capture model structural uncertainty are difficult because of fundamental differences between implementations of different models; (3) different aspects of the modelling procedure must be performed in different environments because existing applications usually only perform the spatial allocation of change. The package includes a stochastic ordered allocation procedure as well as an implementation of the widely used CLUE-S algorithm. We demonstrate its functionality by simulating land use change at the Plum Island Ecosystems site, using a dataset included with the package. It is envisaged that lulccR will enable future model development and comparison within an open environment

Generating global products of LAI and FPAR from SNPP-VIIRS data: theoretical background and implementation

Leaf area index (LAI) and fraction of photosynthetically active radiation (FPAR) absorbed by vegetation have been successfully generated from the Moderate Resolution Imaging Spectroradiometer (MODIS) data since early 2000. As the Visible Infrared Imaging Radiometer Suite (VIIRS) instrument onboard, the Suomi National Polar-orbiting Partnership (SNPP) has inherited the scientific role of MODIS, and the development of a continuous, consistent, and well-characterized VIIRS LAI/FPAR data set is critical to continue the MODIS time series. In this paper, we build the radiative transfer-based VIIRS-specific lookup tables by achieving minimal difference with the MODIS data set and maximal spatial coverage of retrievals from the main algorithm. The theory of spectral invariants provides the configurable physical parameters, i.e., single scattering albedos (SSAs) that are optimized for VIIRS-specific characteristics. The effort finds a set of smaller red-band SSA and larger near-infraredband SSA for VIIRS compared with the MODIS heritage. The VIIRS LAI/FPAR is evaluated through comparisons with one year of MODIS product in terms of both spatial and temporal patterns. Further validation efforts are still necessary to ensure the product quality. Current results, however, imbue confidence in the VIIRS data set and suggest that the efforts described here meet the goal of achieving the operationally consistent multisensor LAI/FPAR data sets. Moreover, the strategies of parametric adjustment and LAI/FPAR evaluation applied to SNPP-VIIRS can also be employed to the subsequent Joint Polar Satellite System VIIRS or other instruments.Accepted manuscrip

Design of an integrated airframe/propulsion control system architecture

The design of an integrated airframe/propulsion control system architecture is described. The design is based on a prevalidation methodology that uses both reliability and performance. A detailed account is given for the testing associated with a subset of the architecture and concludes with general observations of applying the methodology to the architecture

A Landscape and Climate Data Logistic Model of Tsetse Distribution in Kenya

, biologically transmitted by the tsetse fly in Africa, are a major cause of illness resulting in both high morbidity and mortality among humans, cattle, wild ungulates, and other species. However, tsetse fly distributions change rapidly due to environmental changes, and fine-scale distribution maps are few. Due to data scarcity, most presence/absence estimates in Kenya prior to 2000 are a combination of local reports, entomological knowledge, and topographic information. The availability of tsetse fly abundance data are limited, or at least have not been collected into aggregate, publicly available national datasets. Despite this limitation, other avenues exist for estimating tsetse distributions including remotely sensed data, climate information, and statistical tools.Here we present a logistic regression model of tsetse abundance. The goal of this model is to estimate the distribution of tsetse fly in Kenya in the year 2000, and to provide a method by which to anticipate their future distribution. Multiple predictor variables were tested for significance and for predictive power; ultimately, a parsimonious subset of variables was identified and used to construct the regression model with the 1973 tsetse map. These data were validated against year 2000 Food and Agriculture Organization (FAO) estimates. Mapcurves Goodness-Of-Fit scores were used to evaluate the modeled fly distribution against FAO estimates and against 1973 presence/absence data, each driven by appropriate climate data.Logistic regression can be effectively used to produce a model that projects fly abundance under elevated greenhouse gas scenarios. This model identifies potential areas for tsetse abandonment and expansion

Prototyping of LAI and FPAR retrievals from MODIS multi-angle implementation of atmospheric correction (MAIAC) data

Leaf area index (LAI) and fraction of photosynthetically active radiation (FPAR) absorbed by vegetation are key variables in many global models of climate, hydrology, biogeochemistry, and ecology. These parameters are being operationally produced from Terra and Aqua MODIS bidirectional reflectance factor (BRF) data. The MODIS science team has developed, and plans to release, a new version of the BRF product using the multi-angle implementation of atmospheric correction (MAIAC) algorithm from Terra and Aqua MODIS observations. This paper presents analyses of LAI and FPAR retrievals generated with the MODIS LAI/FPAR operational algorithm using Terra MAIAC BRF data. Direct application of the operational algorithm to MAIAC BRF resulted in an underestimation of the MODIS Collection 6 (C6) LAI standard product by up to 10%. The difference was attributed to the disagreement between MAIAC and MODIS BRFs over the vegetation by −2% to +8% in the red spectral band, suggesting different accuracies in the BRF products. The operational LAI/FPAR algorithm was adjusted for uncertainties in the MAIAC BRF data. Its performance evaluated on a limited set of MAIAC BRF data from North and South America suggests an increase in spatial coverage of the best quality, high-precision LAI retrievals of up to 10%. Overall MAIAC LAI and FPAR are consistent with the standard C6 MODIS LAI/FPAR. The increase in spatial coverage of the best quality LAI retrievals resulted in a better agreement of MAIAC LAI with field data compared to the C6 LAI product, with the RMSE decreasing from 0.80 LAI units (C6) down to 0.67 (MAIAC) and the R2 increasing from 0.69 to 0.80. The slope (intercept) of the satellite-derived vs. field-measured LAI regression line has changed from 0.89 (0.39) to 0.97 (0.25).This work was funded by NASA Earth Science Division to MODIS (NNX14AI71G) and VIIRS (NNX14AP80A) programs through grants to Boston University (Ranga B. Myneni, PI), and HBO contract # 21205-14-036 to Yuri Knyazikhin. (NNX14AI71G - NASA; NNX14AP80A - NASA; 21205-14-036 - HBO contract)http://www.mdpi.com/2072-4292/9/4/370Published versio

Introducing artificial data generation in active learning for land use/land cover classification

Fonseca, J., Douzas, G., & Bacao, F. (2021). Increasing the effectiveness of active learning: Introducing artificial data generation in active learning for land use/land cover classification. Remote Sensing, 13(13), 1-20. [2619]. https://doi.org/10.3390/rs13132619In remote sensing, Active Learning (AL) has become an important technique to collect informative ground truth data “on-demand” for supervised classification tasks. Despite its effectiveness, it is still significantly reliant on user interaction, which makes it both expensive and time consuming to implement. Most of the current literature focuses on the optimization of AL by modifying the selection criteria and the classifiers used. Although improvements in these areas will result in more effective data collection, the use of artificial data sources to reduce human–computer interaction remains unexplored. In this paper, we introduce a new component to the typical AL framework, the data generator, a source of artificial data to reduce the amount of user-labeled data required in AL. The implementation of the proposed AL framework is done using Geometric SMOTE as the data generator. We compare the new AL framework to the original one using similar acquisition functions and classifiers over three AL-specific performance metrics in seven benchmark datasets. We show that this modification of the AL framework significantly reduces cost and time requirements for a successful AL implementation in all of the datasets used in the experiment.publishersversionpublishe