TelsNet: temporal lesion network embedding in a transformer model to detect cervical cancer through colposcope images

Cervical cancer ranks as the fourth most prevalent malignancy among women globally. Timely identification and intervention in cases of cervical cancer hold the potential for achieving complete remission and cure. In this study, we built a deep learning model based on self-attention mechanism using transformer architecture to classify the cervix images to help in diagnosis of cervical cancer. We have used techniques like an enhanced multivariate gaussian mixture model optimized with mexican axolotl algorithm for segmenting the colposcope images prior to the Temporal Lesion Convolution Neural Network (TelsNet) classifying the images. TelsNet is a transformer-based neural network that uses temporal convolutional neural networks to identify cancerous regions in colposcope images. Our experiments show that TelsNet achieved an accuracy of 92.7%, with a sensitivity of 73.4% and a specificity of 82.1%. We compared the performance of our model with various state-of-the-art methods, and our results demonstrate that TelsNet outperformed the other methods. The findings have the potential to significantly simplify the process of detecting and accurately classifying cervical cancers at an early stage, leading to improved rates of remission and better overall outcomes for patients globally

Use of Hyperspectral Remote Sensing to Estimate Water Quality

Approximating and forecasting water variables like phosphorus, nitrogen, chlorophyll, dissolved organic matter, and turbidity are of supreme importance due to their strong influence on water resource quality. This chapter is aimed at showing the practicability of merging water quality observations from remote sensing with water quality modeling for efficient and effective monitoring of water quality. We examine the spatial dynamics of water quality with hyperspectral remote sensing and present approaches that can be used to estimate water quality using hyperspectral images. The methods presented here have been embraced because the blue-green and green algae peak wavelengths reflectance are close together and make their distinction more challenging. It has also been established that hyperspectral imagers permit an improved recognition of chlorophyll and hereafter algae, due to acquired narrow spectral bands between 450 nm and 600 nm. We start by describing the practical application of hyperspectral remote sensing data in water quality modeling. The surface inherent optical properties of absorption and backscattering of chlorophyll a, colored dissolved organic matter (CDOM), and turbidity are estimated, and a detailed approach on analyzing ARCHER data for water quality estimation is presented

Polarized light - host location and selection cue in phytophagous insects?

Insect herbivores exploit plant cues to discern host and non-host plants. Studies of visual plant cues have focused on color despite the inherent polarization sensitivity of insect photoreceptors and the information carried by polarization of foliar reflectance, most notably the degree of linear polarization (DoLP; 0-100%). The DoLP of foliar reflection was hypothesized to be a host plant cue for insects but was never experimentally tested. I investigated the use of these polarization cues by the cabbage white butterfly, Pieris rapae (Pieridae). This butterfly has a complex visual system with several different polarization-sensitive photoreceptors, as characterized with electrophysiology and histology. I applied photo polarimetry revealing large differences in the DoLP of leaf-reflected light among plant species generally and between host and non-host plants of P. rapae specifically. As polarized light cues are directionally dependent, I also tested, and modelled, the effect of approach trajectory on the polarization of plant-reflected light and the resulting attractiveness to P. rapae, showing that certain approach trajectories are optimal for discriminating among plants based on these cues. I then demonstrated that P. rapae exploit the DoLP of foliar reflections to discriminate among plants. In experiments with paired digital plant images that allowed for independent control of polarization, color and intensity, P. rapae females preferred images of the host plant cabbage with a low DoLP (31%) to images of the non-host plant potato with a high DoLP (50%). These results indicated that the DoLP had a greater effect on foraging decisions than the differential color, intensity or shape of the two plant images. To investigate potential neurological mechanisms, I designed behavioral bioassays presenting choices between images that differed in color, intensity and/or DoLP. The combined results of these bioassays suggest that several photoreceptor classes are involved and that P. rapae females process and interpret polarization reflections in a way different from that described for other polarization-sensitive taxa. My work has focused on P. rapae and its host plants but there is every reason to believe that the DoLP of foliar reflection is an essential plant cue that may commonly be exploited by foraging insect herbivore

Image based surface reflectance remapping for consistent and tool independent material appearence

Physically-based rendering in Computer Graphics requires the knowledge of material properties other than 3D shapes, textures and colors, in order to solve the rendering equation. A number of material models have been developed, since no model is currently able to reproduce the full range of available materials. Although only few material models have been widely adopted in current rendering systems, the lack of standardisation causes several issues in the 3D modelling workflow, leading to a heavy tool dependency of material appearance. In industry, final decisions about products are often based on a virtual prototype, a crucial step for the production pipeline, usually developed by a collaborations among several departments, which exchange data. Unfortunately, exchanged data often tends to differ from the original, when imported into a different application. As a result, delivering consistent visual results requires time, labour and computational cost. This thesis begins with an examination of the current state of the art in material appearance representation and capture, in order to identify a suitable strategy to tackle material appearance consistency. Automatic solutions to this problem are suggested in this work, accounting for the constraints of real-world scenarios, where the only available information is a reference rendering and the renderer used to obtain it, with no access to the implementation of the shaders. In particular, two image-based frameworks are proposed, working under these constraints. The first one, validated by means of perceptual studies, is aimed to the remapping of BRDF parameters and useful when the parameters used for the reference rendering are available. The second one provides consistent material appearance across different renderers, even when the parameters used for the reference are unknown. It allows the selection of an arbitrary reference rendering tool, and manipulates the output of other renderers in order to be consistent with the reference

Fundamental remote sensing science research program. Part 1: Scene radiation and atmospheric effects characterization project

Brief articles summarizing the status of research in the scene radiation and atmospheric effect characterization (SRAEC) project are presented. Research conducted within the SRAEC program is focused on the development of empirical characterizations and mathematical process models which relate the electromagnetic energy reflected or emitted from a scene to the biophysical parameters of interest

Phenomenological modeling of image irradiance for non-Lambertian surfaces under natural illumination.

Various vision tasks are usually confronted by appearance variations due to changes of illumination. For instance, in a recognition system, it has been shown that the variability in human face appearance is owed to changes to lighting conditions rather than person\u27s identity. Theoretically, due to the arbitrariness of the lighting function, the space of all possible images of a fixed-pose object under all possible illumination conditions is infinite dimensional. Nonetheless, it has been proven that the set of images of a convex Lambertian surface under distant illumination lies near a low dimensional linear subspace. This result was also extended to include non-Lambertian objects with non-convex geometry. As such, vision applications, concerned with the recovery of illumination, reflectance or surface geometry from images, would benefit from a low-dimensional generative model which captures appearance variations w.r.t. illumination conditions and surface reflectance properties. This enables the formulation of such inverse problems as parameter estimation. Typically, subspace construction boils to performing a dimensionality reduction scheme, e.g. Principal Component Analysis (PCA), on a large set of (real/synthesized) images of object(s) of interest with fixed pose but different illumination conditions. However, this approach has two major problems. First, the acquired/rendered image ensemble should be statistically significant vis-a-vis capturing the full behavior of the sources of variations that is of interest, in particular illumination and reflectance. Second, the curse of dimensionality hinders numerical methods such as Singular Value Decomposition (SVD) which becomes intractable especially with large number of large-sized realizations in the image ensemble. One way to bypass the need of large image ensemble is to construct appearance subspaces using phenomenological models which capture appearance variations through mathematical abstraction of the reflection process. In particular, the harmonic expansion of the image irradiance equation can be used to derive an analytic subspace to represent images under fixed pose but different illumination conditions where the image irradiance equation has been formulated in a convolution framework. Due to their low-frequency nature, irradiance signals can be represented using low-order basis functions, where Spherical Harmonics (SH) has been extensively adopted. Typically, an ideal solution to the image irradiance (appearance) modeling problem should be able to incorporate complex illumination, cast shadows as well as realistic surface reflectance properties, while moving away from the simplifying assumptions of Lambertian reflectance and single-source distant illumination. By handling arbitrary complex illumination and non-Lambertian reflectance, the appearance model proposed in this dissertation moves the state of the art closer to the ideal solution. This work primarily addresses the geometrical compliance of the hemispherical basis for representing surface reflectance while presenting a compact, yet accurate representation for arbitrary materials. To maintain the plausibility of the resulting appearance, the proposed basis is constructed in a manner that satisfies the Helmholtz reciprocity property while avoiding high computational complexity. It is believed that having the illumination and surface reflectance represented in the spherical and hemispherical domains respectively, while complying with the physical properties of the surface reflectance would provide better approximation accuracy of image irradiance when compared to the representation in the spherical domain. Discounting subsurface scattering and surface emittance, this work proposes a surface reflectance basis, based on hemispherical harmonics (HSH), defined on the Cartesian product of the incoming and outgoing local hemispheres (i.e. w.r.t. surface points). This basis obeys physical properties of surface reflectance involving reciprocity and energy conservation. The basis functions are validated using analytical reflectance models as well as scattered reflectance measurements which might violate the Helmholtz reciprocity property (this can be filtered out through the process of projecting them on the subspace spanned by the proposed basis, where the reciprocity property is preserved in the least-squares sense). The image formation process of isotropic surfaces under arbitrary distant illumination is also formulated in the frequency space where the orthogonality relation between illumination and reflectance bases is encoded in what is termed as irradiance harmonics. Such harmonics decouple the effect of illumination and reflectance from the underlying pose and geometry. Further, a bilinear approach to analytically construct irradiance subspace is proposed in order to tackle the inherent problem of small-sample-size and curse of dimensionality. The process of finding the analytic subspace is posed as establishing a relation between its principal components and that of the irradiance harmonics basis functions. It is also shown how to incorporate prior information about natural illumination and real-world surface reflectance characteristics in order to capture the full behavior of complex illumination and non-Lambertian reflectance. The use of the presented theoretical framework to develop practical algorithms for shape recovery is further presented where the hitherto assumed Lambertian assumption is relaxed. With a single image of unknown general illumination, the underlying geometrical structure can be recovered while accounting explicitly for object reflectance characteristics (e.g. human skin types for facial images and teeth reflectance for human jaw reconstruction) as well as complex illumination conditions. Experiments on synthetic and real images illustrate the robustness of the proposed appearance model vis-a-vis illumination variation. Keywords: computer vision, computer graphics, shading, illumination modeling, reflectance representation, image irradiance, frequency space representations, {hemi)spherical harmonics, analytic bilinear PCA, model-based bilinear PCA, 3D shape reconstruction, statistical shape from shading