A novel technique for reducing false positive detections in CAD-CTC

Computed tomography colonoscopy (CTC) is an emerging alternative to conventional colonoscopy for colorectal cancer screening. A series of computer assisted diagnosis (CAD) techniques have been developed for use in CTC. Although high levels of accuracy for polyp detection have been reported, the problem of excessive false positive detections still warrants attention. We present a CAD-CTC technique that has been developed specifically to reduce the number of false positive detections without compromising polyp detection accuracy. The technique incorporates a novel intermediate stage that restructures initial polyp candidates so that they conform more closely to the shape of actual polyps. The restructuring process causes false positives to expand to include more false positive characteristics, whereas, actual polyps retain their original polyp-like characteristics. An evaluation of the documented technique demonstrated that it can be successfully applied to the majority of polyp candidates, and that its use can reduce the number of false positive detections by up to 57.8%

A novel technique for reducing false positive detections in CAD-CTC

Computed tomography colonoscopy (CTC) is an emerging alternative to conventional colonoscopy for colorectal cancer screening. A series of computer assisted diagnosis (CAD) techniques have been developed for use in CTC. Although high levels of accuracy for polyp detection have been reported, the problem of excessive false positive detections still warrants attention. We present a CAD-CTC technique that has been developed specifically to reduce the number of false positive detections without compromising polyp detection accuracy. The technique incorporates a novel intermediate stage that restructures initial polyp candidates so that they conform more closely to the shape of actual polyps. The restructuring process causes false positives to expand to include more false positive characteristics, whereas, actual polyps retain their original polyp-like characteristics. An evaluation of the documented technique demonstrated that it can be successfully applied to the majority of polyp candidates, and that its use can reduce the number of false positive detections by up to 57.8%

Image segmentation using joint spatial-intensity-shape features: Application to CT lung nodule segmentation

Automatic segmentation of medical images is a challenging problem due to the complexity and variability of human anatomy, poor contrast of the object being segmented, and noise resulting from the image acquisition process. This paper presents a novel non-parametric feature analysis method for the segmentation of 3D medical lesions. The proposed algorithm combines 1) a volumetric shape feature (shape index) based on high-order partial derivatives; 2) mean shift clustering in a joint spatial-intensity-shape (JSIS) feature space; and 3) a modified expectation-maximization (MEM) algorithm on the mean shift mode map to merge the neighboring regions (modes). In such a scenario, the volumetric shape feature is integrated into the process of the segmentation algorithm. The joint spatial–intensity-shape features provide rich information for the segmentation of the anatomic structures or lesions (tumors). The proposed method has been evaluated on a clinical dataset of thoracic CT scans that contains 68 nodules. A volume overlap ratio between each segmented nodule and the ground truth annotation is calculated. Using the proposed method, the mean overlap ratio over all the nodules is 0.80. On visual inspection and using a quantitative evaluation, the experimental results demonstrate the potential of the proposed method. It can properly segment a variety of nodules including juxta-vascular and juxta-pleural nodules, which are challenging for conventional methods due to the high similarity of intensities between the nodules and their adjacent tissues. This approach could also be applied to lesion segmentation in other anatomies, such as polyps in the colon

Context-specific method for detection of soft-tissue lesions in non-cathartic low-dose dual-energy CT colonography

In computed tomographic colonography (CTC), orally administered fecal-tagging agents can be used to indicate residual feces and fluid that could otherwise hide or imitate lesions on CTC images of the colon. Although the use of fecal tagging improves the detection accuracy of CTC, it can introduce image artifacts that may cause lesions that are covered by fecal tagging to have a different visual appearance than those not covered by fecal tagging. This can distort the values of image-based computational features, thereby reducing the accuracy of computer-aided detection (CADe). We developed a context-specific method that performs the detection of lesions separately on lumen regions covered by air and on those covered by fecal tagging, thereby facilitating the optimization of detection parameters separately for these regions and their detected lesion candidates to improve the detection accuracy of CADe. For pilot evaluation, the method was integrated into a dual-energy CADe (DE-CADe) scheme and evaluated by use of leave-one-patient-out evaluation on 66 clinical non-cathartic low-dose dual-energy CTC (DE-CTC) cases that were acquired at a low effective radiation dose and reconstructed by use of iterative image reconstruction. There were 22 colonoscopy-confirmed lesions ≥6 mm in size in 21 patients. The DE-CADe scheme detected 96% of the lesions at a median of 6 FP detections per patient. These preliminary results indicate that the use of context-specific detection can yield high detection accuracy of CADe in non-cathartic low-dose DE-CTC examinations

Development of a synthetic phantom for the selection of optimal scanning parameters in CAD-CT colonography

The aim of this paper is to present the development of a synthetic phantom that can be used for the selection of optimal scanning parameters in computed tomography (CT) colonography. In this paper we attempt to evaluate the influence of the main scanning parameters including slice thickness, reconstruction interval, field of view, table speed and radiation dose on the overall performance of a computer aided detection (CAD)–CTC system. From these parameters the radiation dose received a special attention, as the major problem associated with CTC is the patient exposure to significant levels of ionising radiation. To examine the influence of the scanning parameters we performed 51 CT scans where the spread of scanning parameters was divided into seven different protocols. A large number of experimental tests were performed and the results analysed. The results show that automatic polyp detection is feasible even in cases when the CAD–CTC system was applied to low dose CT data acquired with the following protocol: 13 mAs/rotation with collimation of 1.5 mm × 16 mm, slice thickness of 3.0 mm, reconstruction interval of 1.5 mm, table speed of 30 mm per rotation. The CT phantom data acquired using this protocol was analysed by an automated CAD–CTC system and the experimental results indicate that our system identified all clinically significant polyps (i.e. larger than 5 mm)

The use of 3D surface fitting for robust polyp detection and classification in CT colonography

In this paper we describe the development of a computationally efficient computer-aided detection (CAD) algorithm based on the evaluation of the surface morphology that is employed for the detection of colonic polyps in computed tomography (CT) colonography. Initial polyp candidate voxels were detected using the surface normal intersection values. These candidate voxels were clustered using the normal direction, convexity test, region growing and Gaussian distribution. The local colonic surface was classified as polyp or fold using a feature normalized nearest neighbor-hood classifier. The main merit of this paper is the methodology applied to select the robust features derived from the colon surface that have a high discriminative power for polyp/fold classification. The devised polyp detection scheme entails a low computational overhead (typically takes 2.20 minute per dataset) and shows 100% sensitivity for phantom polyps greater than 5mm. It also shows 100% sensitivity for real polyps larger than 10mm and 91.67% sensitivity for polyps between 5 to 10mm with an average of 4.5 false positives per dataset. The experimental data indicates that the proposed CAD polyp detection scheme outperforms other techniques that identify the polyps using features that sample the colon surface curvature especially when applied to low-dose datasets

External Clinical Validation of Prone and Supine CT Colonography Registration

This paper provides an external validation of a prone-supine registration algorithm for CT colonography (CTC). A validation sample of 49 patient cases with 66 polyps (6 to 30 mm) was selected from a publicly available, anonymized CTC archive. To enhance generalizability, no case was excluded due to poor preparation or inadequate distension. Corresponding prone and supine polyp coordinates were recorded and the endoluminal surfaces registered: a Markov Random Field technique was used to find feature matches between prone/supine acquisitions and following mapping of the endoluminal surface to a cylinder, dense surface correspondence was achieved via cylindrical non-rigid registration. The polyp registration error was determined and a subjective assessment of registration made for 2D slice-based and 3D endoluminal data display using a pre-specified scoring system. Results were compared to using “normalized distance along the colon centerline” (NDACC) which approximates to the method currently employed to match colonic positions using proprietary CT colonography interpretation software. Registration was possible in all 49 cases. Overall mean 3D polyp registration error was significantly smaller with 19.9 mm in comparison to 27.7 mm using NDACC (p=0.001). 82.7% of polyp matches were defined as “successful” in comparison to 37.1% using NDACC according to the pre-specified criteria. Similarly, using 2D visualization, 62.1% registrations were “successful” and only 22.7% using NDACC. Full surface-based prone-to-supine registration can successfully map the location of a polyp identified on one acquisition to the corresponding endoluminal surface in the opposing acquisition, greatly facilitating polyp matching and aiding interpretation. Our method compares favorably to using NDACC