Knowledge-Based Techniques for Scholarly Data Access: Towards Automatic Curation

Accessing up-to-date and quality scientific literature is a critical preliminary step in any research activity. Identifying relevant scholarly literature for the extents of a given task or application is, however a complex and time consuming activity. Despite the large number of tools developed over the years to support scholars in their literature surveying activity, such as Google Scholar, Microsoft Academic search, and others, the best way to access quality papers remains asking a domain expert who is actively involved in the field and knows research trends and directions. State of the art systems, in fact, either do not allow exploratory search activity, such as identifying the active research directions within a given topic, or do not offer proactive features, such as content recommendation, which are both critical to researchers. To overcome these limitations, we strongly advocate a paradigm shift in the development of scholarly data access tools: moving from traditional information retrieval and filtering tools towards automated agents able to make sense of the textual content of published papers and therefore monitor the state of the art. Building such a system is however a complex task that implies tackling non trivial problems in the fields of Natural Language Processing, Big Data Analysis, User Modelling, and Information Filtering. In this work, we introduce the concept of Automatic Curator System and present its fundamental components.openDottorato di ricerca in InformaticaopenDe Nart, Dari

User-Friendly Ontology Creation Methodologies - A Survey

The convergence of the semantic web and the social web to the social semantic web leads to new challenges in ontology engineering. As of today ontologies are created by highly specialized ontology engineers. In order to unite the wisdom of crowds and ontologies new approaches to ontology creation are necessary to bridge the ontology gap and enable novice users to create formalized knowledge. Numerous ontology development methodologies are available; in this paper we will briefly present 16 ontology development methodologies and evaluate them against criteria for their user-friendliness and their suitability for usage by novice users and domain experts. Our eventual goal is the identification of best practices and required research for user-friendly ontology design

Creating a Concurrent In-Memory B-Tree Optimized for NUMA Systems

The size of main memory is becoming larger. With the number of Central Processing Unit (CPU) cores ever increasing in modern systems, with each of them being able to access memory, the organization of memory becomes more important. In multicore systems, there are two main architectures for memory organization with respect to the cores - Symmetric Multi-Processor (SMP) and Non-Uniform Memory Architecture (NUMA). Prior work has focused on the improvement of the performance of B-Trees in highly concurrent and distributed environments, as well as in memory, for shared-memory mul- tiprocessors. However, little focus has been given to the performance of main memory B-Trees for NUMA systems. This work focuses on improving the performance of B-Trees contained in main memory of NUMA systems by introducing modifications that consider its storage in the physically distributed main memory of the NUMA system. The work in this thesis makes the following contributions to the development of a distributed B-Tree, specifically in a NUMA environment, modified from a B-Tree originally designed for high concurrency: • It introduces replication of internal nodes of the tree and shows how this can improve its overall performance in a NUMA environment. • It introduces NUMA-aware locking procedures with the aim of managing contention and exploiting locality of lock requests with reference to previous client operation request locations. • It introduces changes in the granularity of locking, starting from the original locking of every node to the locking of certain levels of nodes, showing the tradeoff between the granularity of locking and the performance of the tree based on the workload. • It considers the combination of the different techniques, with the aim of finding the combination which performs well overall for varying read-heavy workloads and number of client threads

Atti del IX Convegno Annuale dell'Associazione per l'Informatica Umanistica e la Cultura Digitale (AIUCD). La svolta inevitabile: sfide e prospettive per l'Informatica Umanistica

Proceedings of the IX edition of the annual AIUCD conferenc

Atti del IX Convegno Annuale AIUCD. La svolta inevitabile: sfide e prospettive per l'Informatica Umanistica.

La nona edizione del convegno annuale dell'Associazione per l'Informatica Umanistica e la Cultura Digitale (AIUCD 2020; Milano, 15-17 gennaio 2020) ha come tema “La svolta inevitabile: sfide e prospettive per l'Informatica Umanistica”, con lo specifico obiettivo di fornire un'occasione per riflettere sulle conseguenze della crescente diffusione dell’approccio computazionale al trattamento dei dati connessi all’ambito umanistico. Questo volume raccoglie gli articoli i cui contenuti sono stati presentati al convegno. A diversa stregua, essi affrontano il tema proposto da un punto di vista ora più teorico-metodologico, ora più empirico-pratico, presentando i risultati di lavori e progetti (conclusi o in corso) che considerino centrale il trattamento computazionale dei dati

Scalable and Declarative Information Extraction in a Parallel Data Analytics System

Informationsextraktions (IE) auf sehr großen Datenmengen erfordert hochkomplexe, skalierbare und anpassungsfähige Systeme. Obwohl zahlreiche IE-Algorithmen existieren, ist die nahtlose und erweiterbare Kombination dieser Werkzeuge in einem skalierbaren System immer noch eine große Herausforderung. In dieser Arbeit wird ein anfragebasiertes IE-System für eine parallelen Datenanalyseplattform vorgestellt, das für konkrete Anwendungsdomänen konfigurierbar ist und für Textsammlungen im Terabyte-Bereich skaliert. Zunächst werden konfigurierbare Operatoren für grundlegende IE- und Web-Analytics-Aufgaben definiert, mit denen komplexe IE-Aufgaben in Form von deklarativen Anfragen ausgedrückt werden können. Alle Operatoren werden hinsichtlich ihrer Eigenschaften charakterisiert um das Potenzial und die Bedeutung der Optimierung nicht-relationaler, benutzerdefinierter Operatoren (UDFs) für Data Flows hervorzuheben. Anschließend wird der Stand der Technik in der Optimierung nicht-relationaler Data Flows untersucht und herausgearbeitet, dass eine umfassende Optimierung von UDFs immer noch eine Herausforderung ist. Darauf aufbauend wird ein erweiterbarer, logischer Optimierer (SOFA) vorgestellt, der die Semantik von UDFs mit in die Optimierung mit einbezieht. SOFA analysiert eine kompakte Menge von Operator-Eigenschaften und kombiniert eine automatisierte Analyse mit manuellen UDF-Annotationen, um die umfassende Optimierung von Data Flows zu ermöglichen. SOFA ist in der Lage, beliebige Data Flows aus unterschiedlichen Anwendungsbereichen logisch zu optimieren, was zu erheblichen Laufzeitverbesserungen im Vergleich mit anderen Techniken führt. Als Viertes wird die Anwendbarkeit des vorgestellten Systems auf Korpora im Terabyte-Bereich untersucht und systematisch die Skalierbarkeit und Robustheit der eingesetzten Methoden und Werkzeuge beurteilt um schließlich die kritischsten Herausforderungen beim Aufbau eines IE-Systems für sehr große Datenmenge zu charakterisieren.Information extraction (IE) on very large data sets requires highly complex, scalable, and adaptive systems. Although numerous IE algorithms exist, their seamless and extensible combination in a scalable system still is a major challenge. This work presents a query-based IE system for a parallel data analysis platform, which is configurable for specific application domains and scales for terabyte-sized text collections. First, configurable operators are defined for basic IE and Web Analytics tasks, which can be used to express complex IE tasks in the form of declarative queries. All operators are characterized in terms of their properties to highlight the potential and importance of optimizing non-relational, user-defined operators (UDFs) for dataflows. Subsequently, we survey the state of the art in optimizing non-relational dataflows and highlight that a comprehensive optimization of UDFs is still a challenge. Based on this observation, an extensible, logical optimizer (SOFA) is introduced, which incorporates the semantics of UDFs into the optimization process. SOFA analyzes a compact set of operator properties and combines automated analysis with manual UDF annotations to enable a comprehensive optimization of data flows. SOFA is able to logically optimize arbitrary data flows from different application areas, resulting in significant runtime improvements compared to other techniques. Finally, the applicability of the presented system to terabyte-sized corpora is investigated. Hereby, we systematically evaluate scalability and robustness of the employed methods and tools in order to pinpoint the most critical challenges in building an IE system for very large data sets

A framework for analyzing changes in health care lexicons and nomenclatures

Ontologies play a crucial role in current web-based biomedical applications for capturing contextual knowledge in the domain of life sciences. Many of the so-called bio-ontologies and controlled vocabularies are known to be seriously defective from both terminological and ontological perspectives, and do not sufficiently comply with the standards to be considered formai ontologies. Therefore, they are continuously evolving in order to fix the problems and provide valid knowledge. Moreover, many problems in ontology evolution often originate from incomplete knowledge about the given domain. As our knowledge improves, the related definitions in the ontologies will be altered. This problem is inadequately addressed by available tools and algorithms, mostly due to the lack of suitable knowledge representation formalisms to deal with temporal abstract notations, and the overreliance on human factors. Also most of the current approaches have been focused on changes within the internal structure of ontologies, and interactions with other existing ontologies have been widely neglected. In this research, alter revealing and classifying some of the common alterations in a number of popular biomedical ontologies, we present a novel agent-based framework, RLR (Represent, Legitimate, and Reproduce), to semi-automatically manage the evolution of bio-ontologies, with emphasis on the FungalWeb Ontology, with minimal human intervention. RLR assists and guides ontology engineers through the change management process in general, and aids in tracking and representing the changes, particularly through the use of category theory. Category theory has been used as a mathematical vehicle for modeling changes in ontologies and representing agents' interactions, independent of any specific choice of ontology language or particular implementation. We have also employed rule-based hierarchical graph transformation techniques to propose a more specific semantics for analyzing ontological changes and transformations between different versions of an ontology, as well as tracking the effects of a change in different levels of abstractions. Thus, the RLR framework enables one to manage changes in ontologies, not as standalone artifacts in isolation, but in contact with other ontologies in an openly distributed semantic web environment. The emphasis upon the generality and abstractness makes RLR more feasible in the multi-disciplinary domain of biomedical Ontology change management

Predictive maintenance of electrical grid assets: internship at EDP Distribuição - Energia S.A

Internship Report presented as the partial requirement for obtaining a Master's degree in Information Management, specialization in Knowledge Management and Business IntelligenceThis report will describe the activities developed during an internship at EDP Distribuição, focusing on a Predictive Maintenance analytics project directed at high voltage electrical grid assets including Overhead Lines, Power Transformers and Circuit Breakers. The project’s main goal is to support EDP’s asset management processes by improving maintenance and investing planning. The project’s main deliverables are the Probability of Failure metric that forecast asset failures 15 days ahead of time, estimated through supervised machine learning models; the Health Index metric that indicates asset’s current state and condition, implemented though the Ofgem methodology; and two asset management dashboards. The project was implemented by an external service provider, a consultant company, and during the internship it was possible to integrate the team, and participate in the development activities