Periodic subgraph mining in dynamic networks

La tesi si prefigge di scoprire interazioni periodiche frequenti tra i membri di una popolazione il cui comportamento viene studiato in un certo arco di tempo. Le interazioni tra i membri della popolazione sono rappresentate da archi E tra vertici V di un grafo. Una rete dinamica consiste in una serie di T timestep per ciascuno dei quali esiste un grafo che rappresenta le interazioni attive in quel dato istante. Questa tesi presenta ListMiner, un algoritmo per il problema dell’estrazione di sottografi periodici. La complessità computazionale di tale algoritmo è O((V+E) T2 ln (T /σ)), dove σ è il minimo numero di ripetizioni periodiche necessarie per riportare il sottografo estratto in output. Questa complessità propone un miglioramento di un fattore T rispetto l’unico algoritmo noto in letteratura, PSEMiner. Nella tesi sono inoltre presenti un’analisi dei risultati ottenuti e una presentazione di una variante del problem

Scalable Systems for Large Scale Dynamic Connected Data Processing

As the proliferation of sensors rapidly make the Internet-of-Things (IoT) a reality, the devices and sensors in this ecosystem—such as smartphones, video cameras, home automation systems, and autonomous vehicles—constantly map out the real-world producing unprecedented amounts of dynamic, connected data that captures complex and diverse relations. Unfortunately, existing big data processing and machine learning frameworks are ill-suited for analyzing such dynamic connected data and face several challenges when employed for this purpose.This dissertation focuses on the design and implementation of scalable systems for dynamic connected data processing. We discuss simple abstractions that make it easy to operate on such data, efficient data structures for state management, and computation models that reduce redundant work. We also describe how bridging theory and practice with algorithms and techniques that leverage approximation and streaming theory can significantly speed up connected data computations. The systems described in this dissertation achieve more than an order of magnitude improvement over the state-of-the-art

Phase-based tuning for better utilized performance-asymmetric multicores

The latest trend towards performance asymmetry among cores on a single chip of a multicore processor is posing new software engineering challenges for developers. A key challenge is that for effective utilization of these performance-asymmetric multicore processors, application threads must be assigned to cores such that the resource needs of a thread closely matches resource availability at the assigned core. Determining this assignment manually is tedious, error prone, and it significantly complicates software development. We contribute a transparent and fully-automatic program analysis, which we call phase-guided tuning, to solve this problem. Phase-guided tuning adapts an application to effectively utilize performance-asymmetric cores of a processor. Our technique does not require any changes in the compiler or operating system, thus it is easy to deploy in existing tool chains. It does not require any input from the programmer except the application. Furthermore, it is independent of the characteristics (performance-asymmetry) of the target multicore processor, which has two benefits. First, it avoids the need to create multiple customizations of the binary for each target architecture, and second it relieves the programmer of the burden of anticipating the target architecture. Last but not least, our technique significantly improves performance. Compared to the stock Linux scheduler, our best technique shows 215% improvement in throughput and 36% average process speedup, while maintaining fairness and with negligible overheads

Sketching as a Tool for Efficient Networked Systems

Today, computer systems need to cope with the explosive growth of data in the world. For instance, in data-center networks, monitoring systems are used to measure traffic statistics at high speed; and in financial technology companies, distributed processing systems are deployed to support graph analytics. To fulfill the requirements of handling such large datasets, we build efficient networked systems in a distributed manner most of the time. Ideally, we expect the systems to meet service-level objectives (SLOs) using the least amount of resource. However, existing systems constructed with conventional in-memory algorithms face the following challenges: (1) excessive resource requirements (e.g., CPU, ASIC, and memory) with high cost; (2) infeasibility in a larger scale; (3) processing the data too slowly to meet the objectives. To address these challenges, we propose sketching techniques as a tool to build more efficient networked systems. Sketching algorithms aim to process the data with one or several passes in an online, streaming fashion (e.g., a stream of network packets), and compute highly accurate results. With sketching, we only maintain a compact summary of the entire data and provide theoretical guarantees on error bounds. This dissertation argues for a sketching based design for large-scale networked systems, and demonstrates the benefits in three application contexts: (i) Network monitoring: we build generic monitoring frameworks that support a range of applications on both software and hardware with universal sketches. (ii) Graph pattern mining: we develop a swift, approximate graph pattern miner that scales to very large graphs by leveraging graph sketching techniques. (iii) Halo finding in N-body simulations: we design scalable halo finders on CPU and GPU by leveraging sketch-based heavy hitter algorithms

LIPIcs, Volume 251, ITCS 2023, Complete Volume

LIPIcs, Volume 251, ITCS 2023, Complete Volum

Periodic pattern mining from spatio-temporal trajectory data

Rapid development in GPS tracking techniques produces a large number of spatio-temporal trajectory data. The analysis of these data provides us with a new opportunity to discover useful behavioural patterns. Spatio-temporal periodic pattern mining is employed to find temporal regularities for interesting places. Mining periodic patterns from spatio-temporal trajectories can reveal useful, important and valuable information about people's regular and recurrent movements and behaviours. Previous studies have been proposed to extract people's regular and repeating movement behavior from spatio-temporal trajectories. These previous approaches can target three following issues, (1) long individual trajectory; (2) spatial fuzziness; and (3) temporal fuzziness. First, periodic pattern mining is different to other pattern mining, such as association rule ming and sequential pattern mining, periodic pattern mining requires a very long trajectory from an individual so that the regular period can be extracted from this long single trajectory, for example, one month or one year period. Second, spatial fuzziness shows although a moving object can regularly move along the similar route, it is impossible for it to appear at the exactly same location. For instance, Bob goes to work everyday, and although he can follow a similar path from home to his workplace, the same location cannot be repeated across different days. Third, temporal fuzziness shows that periodicity is complicated including partial time span and multiple interleaving periods. In reality, the period is partial, it is highly impossible to occur through the whole movement of the object. Alternatively, the moving object has only a few periods, such as a daily period for work, or yearly period for holidays. However, it is insufficient to find effective periodic patterns considering these three issues only. This thesis aims to develop a new framework to extract more effective, understandable and meaningful periodic patterns by taking more features of spatio-temporal trajectories into account. The first feature is trajectory sequence, GPS trajectory data is temporally ordered sequences of geolocation which can be represented as consecutive trajectory segments, where each entry in each trajectory segment is closely related to the previous sampled point (trajectory node) and the latter one, rather than being isolated. Existing approaches disregard the important sequential nature of trajectory. Furthermore, they introduce both unwanted false positive reference spots and false negative reference spots. The second feature is spatial and temporal aspects. GPS trajectory data can be presented as triple data (x; y; t), x and y represent longitude and latitude respectively whilst t shows corresponding time in this location. Obviously, spatial and temporal aspects are two key factors. Existing methods do not consider these two aspects together in periodic pattern mining. Irregular time interval is the third feature of spatio-temporal trajectory. In reality, due to weather conditions, device malfunctions, or battery issues, the trajectory data are not always regularly sampled. Existing algorithms cannot deal with this issue but instead require a computationally expensive trajectory interpolation process, or it is assumed that trajectory is with regular time interval. The fourth feature is hierarchy of space. Hierarchy is an inherent property of spatial data that can be expressed in different levels, such as a country includes many states, a shopping mall is comprised of many shops. Hierarchy of space can find more hidden and valuable periodic patterns. Existing studies do not consider this inherent property of trajectory. Hidden background semantic information is the final feature. Aspatial semantic information is one of important features in spatio-temporal data, and it is embedded into the trajectory data. If the background semantic information is considered, more meaningful, understandable and useful periodic patterns can be extracted. However, existing methods do not consider the geographical information underlying trajectories. In addition, at times we are interested in finding periodic patterns among trajectory paths rather than trajectory nodes for different applications. This means periodic patterns should be identified and detected against trajectory paths rather than trajectory nodes for some applications. Existing approaches for periodic pattern mining focus on trajectories nodes rather than paths. To sum up, the aim of this thesis is to investigate solutions to these problems in periodic pattern mining in order to extract more meaningful, understandable periodic patterns. Each of three chapters addresses a different problem and then proposes adequate solutions to problems currently not addressed in existing studies. Finally, this thesis proposes a new framework to address all problems. First, we investigated a path-based solution which can target trajectory sequence and spatio-temporal aspects. We proposed an algorithm called Traclus (spatio-temporal) which can take spatial and temporal aspects into account at the same time instead of only considering spatial aspect. The result indicated our method produced more effective periodic patterns based on trajectory paths than existing node-based methods using two real-world trajectories. In order to consider hierarchy of space, we investigated existing hierarchical clustering approaches to obtain hierarchical reference spots (trajectory paths) for periodic pattern mining. HDBSCAN is an incremental version of DBSCAN which is able to handle clusters with different densities to generate a hierarchical clustering result using the single-linkage method, and then it automatically extracts clusters from a hierarchical tree. Thus, we modified traditional clustering method DBSCAN in Traclus (spatio-temporal) to HDBSCAN for extraction of hierarchical reference spots. The result is convincing, and reveals more periodic patterns than those of existing methods. Second, we introduced a stop/move method to annotate each spatio-temporal entry with a semantic label, such as restaurant, university and hospital. This method can enrich a trajectory with background semantic information so that we can easily infer people's repeating behaviors. In addition, existing methods use interpolation to make trajectory regular and then apply Fourier transform and autocorrelation to automatically detect period for each reference spot. An increasing number of trajectory nodes leads to an exponential increase of running time. Thus, we employed Lomb-Scargle periodogram to detect period for each reference spot based on raw trajectory without requiring any interpolation method. The results showed our method outperformed existing approaches on effectiveness and efficiency based on two real datasets. For hierarchical aspect, we extended previous work to find hierarchical semantic periodic patterns by applying HDBSCAN. The results were promising. Third, we apply our methodology to a case study, which reveals many interesting medical periodic patterns. These patterns can effectively explore human movement behaviors for positive medical outcomes. To sum up, this research proposed a new framework to gradually target the problems that existing methods cannot handle. These include: how to consider trajectory sequence, how to consider spatial temporal aspects together, how to deal with trajectory with irregular time interval, how to consider hierarchy of space and how to extract semantic information behind trajectory. After addressing all these problems, the experimental results demonstrate that our method can find more understandable, meaningful and effective periodic patterns than existing approaches

Characterization and Avoidance of Critical Pipeline Structures in Aggressive Superscalar Processors

In recent years, with only small fractions of modern processors now accessible in a single cycle, computer architects constantly fight against propagation issues across the die. Unfortunately this trend continues to shift inward, and now the even most internal features of the pipeline are designed around communication, not computation. To address the inward creep of this constraint, this work focuses on the characterization of communication within the pipeline itself, architectural techniques to avoid it when possible, and layout co-design for early detection of problems. I present work in creating a novel detection tool for common case operand movement which can rapidly characterize an applications dataflow patterns. The results produced are suitable for exploitation as a small number of patterns can describe a significant portion of modern applications. Work on dynamic dependence collapsing takes the observations from the pattern results and shows how certain groups of operations can be dynamically grouped, avoiding unnecessary communication between individual instructions. This technique also amplifies the efficiency of pipeline data structures such as the reorder buffer, increasing both IPC and frequency. I also identify the same sets of collapsible instructions at compile time, producing the same benefits with minimal hardware complexity. This technique is also done in a backward compatible manner as the groups are exposed by simple reordering of the binarys instructions. I present aggressive pipelining approaches for these resources which avoids the critical timing often presumed necessary in aggressive superscalar processors. As these structures are designed for the worst case, pipelining them can produce greater frequency benefit than IPC loss. I also use the observation that the dynamic issue order for instructions in aggressive superscalar processors is predictable. Thus, a hardware mechanism is introduced for caching the wakeup order for groups of instructions efficiently. These wakeup vectors are then used to speculatively schedule instructions, avoiding the dynamic scheduling when it is not necessary. Finally, I present a novel approach to fast and high-quality chip layout. By allowing architects to quickly evaluate what if scenarios during early high-level design, chip designs are less likely to encounter implementation problems later in the process.Ph.D.Committee Chair: Scott Wills; Committee Member: David Schimmel; Committee Member: Gabriel Loh; Committee Member: Hsien-Hsin Lee; Committee Member: Yorai Ward