Pulse Coupled Neural Networks for the Segmentation of Magnetic Resonance Brain Images

This research develops an automated method for segmenting Magnetic Resonance (MR) brain images based on Pulse Coupled Neural Networks (PCNN). MR brain image segmentation has proven difficult, primarily due to scanning artifacts such as interscan and intrascan intensity inhomogeneities. The method developed and presented here uses a PCNN to both filter and segment MR brain images. The technique begins by preprocessing images with a PCNN filter to reduce scanning artifacts. Images are then contrast enhanced via histogram equalization. Finally, a PCNN is used to segment the images to arrive at the final result. Modifications to the original PCNN model are made that drastically improve performance while greatly reducing memory requirements. These modifications make it possible to extend the method to filter and segment three dimensionally. Volumes represented as series of images are segmented using this new method. This new three dimensional segmentation technique can be used to obtain a better segmentation of a single image or of an entire volume. Results indicate that the PCNN shows promise as an image analysis tool

Contributions of Continuous Max-Flow Theory to Medical Image Processing

Discrete graph cuts and continuous max-flow theory have created a paradigm shift in many areas of medical image processing. As previous methods limited themselves to analytically solvable optimization problems or guaranteed only local optimizability to increasingly complex and non-convex functionals, current methods based now rely on describing an optimization problem in a series of general yet simple functionals with a global, but non-analytic, solution algorithms. This has been increasingly spurred on by the availability of these general-purpose algorithms in an open-source context. Thus, graph-cuts and max-flow have changed every aspect of medical image processing from reconstruction to enhancement to segmentation and registration. To wax philosophical, continuous max-flow theory in particular has the potential to bring a high degree of mathematical elegance to the field, bridging the conceptual gap between the discrete and continuous domains in which we describe different imaging problems, properties and processes. In Chapter 1, we use the notion of infinitely dense and infinitely densely connected graphs to transfer between the discrete and continuous domains, which has a certain sense of mathematical pedantry to it, but the resulting variational energy equations have a sense of elegance and charm. As any application of the principle of duality, the variational equations have an enigmatic side that can only be decoded with time and patience. The goal of this thesis is to show the contributions of max-flow theory through image enhancement and segmentation, increasing incorporation of topological considerations and increasing the role played by user knowledge and interactivity. These methods will be rigorously grounded in calculus of variations, guaranteeing fuzzy optimality and providing multiple solution approaches to addressing each individual problem

Advanced Sensing and Image Processing Techniques for Healthcare Applications

This Special Issue aims to attract the latest research and findings in the design, development and experimentation of healthcare-related technologies. This includes, but is not limited to, using novel sensing, imaging, data processing, machine learning, and artificially intelligent devices and algorithms to assist/monitor the elderly, patients, and the disabled population

A robust framework for medical image segmentation through adaptable class-specific representation

Medical image segmentation is an increasingly important component in virtual pathology, diagnostic imaging and computer-assisted surgery. Better hardware for image acquisition and a variety of advanced visualisation methods have paved the way for the development of computer based tools for medical image analysis and interpretation. The routine use of medical imaging scans of multiple modalities has been growing over the last decades and data sets such as the Visible Human Project have introduced a new modality in the form of colour cryo section data. These developments have given rise to an increasing need for better automatic and semiautomatic segmentation methods. The work presented in this thesis concerns the development of a new framework for robust semi-automatic segmentation of medical imaging data of multiple modalities. Following the specification of a set of conceptual and technical requirements, the framework known as ACSR (Adaptable Class-Specific Representation) is developed in the first case for 2D colour cryo section segmentation. This is achieved through the development of a novel algorithm for adaptable class-specific sampling of point neighbourhoods, known as the PGA (Path Growing Algorithm), combined with Learning Vector Quantization. The framework is extended to accommodate 3D volume segmentation of cryo section data and subsequently segmentation of single and multi-channel greyscale MRl data. For the latter the issues of inhomogeneity and noise are specifically addressed. Evaluation is based on comparison with previously published results on standard simulated and real data sets, using visual presentation, ground truth comparison and human observer experiments. ACSR provides the user with a simple and intuitive visual initialisation process followed by a fully automatic segmentation. Results on both cryo section and MRI data compare favourably to existing methods, demonstrating robustness both to common artefacts and multiple user initialisations. Further developments into specific clinical applications are discussed in the future work section

Intelligent X-ray imaging inspection system for the food industry.

The inspection process of a product is an important stage of a modern production factory. This research presents a generic X-ray imaging inspection system with application for the detection of foreign bodies in a meat product for the food industry. The most important modules in the system are the image processing module and the high-level detection system. This research discusses the use of neural networks for image processing and fuzzy-logic for the detection of potential foreign bodies found in x-ray images of chicken breast meat after the de-boning process. The meat product is passed under a solid-state x-ray sensor that acquires a dual-band two-dimensional image of the meat (a low- and a high energy image). A series of image processing operations are applied to the acquired image (pre-processing, noise removal, contrast enhancement). The most important step of the image processing is the segmentation of the image into meaningful objects. The segmentation task is a difficult one due to the lack of clarity of the acquired X-ray images and the resulting segmented image represents not only correctly identified foreign bodies but also areas caused by overlapping muscle regions in the meat which appear very similar to foreign bodies in the resulting x-ray image. A Hopfield neural network architecture was proposed for the segmentation of a X-ray dual-band image. A number of image processing measurements were made on each object (geometrical and grey-level based statistical features) and these features were used as the input into a fuzzy logic based high-level detection system whose function was to differentiate between bones and non-bone segmented regions. The results show that system's performance is considerably improved over non-fuzzy or crisp methods. Possible noise affecting the system is also investigated. The proposed system proved to be robust and flexible while achieving a high level of performance. Furthermore, it is possible to use the same approach when analysing images from other applications areas from the automotive industry to medicine

Intelligent X-ray imaging inspection system for the food industry.

The inspection process of a product is an important stage of a modern production factory. This research presents a generic X-ray imaging inspection system with application for the detection of foreign bodies in a meat product for the food industry. The most important modules in the system are the image processing module and the high-level detection system. This research discusses the use of neural networks for image processing and fuzzy-logic for the detection of potential foreign bodies found in x-ray images of chicken breast meat after the de-boning process. The meat product is passed under a solid-state x-ray sensor that acquires a dual-band two-dimensional image of the meat (a low- and a high energy image). A series of image processing operations are applied to the acquired image (pre-processing, noise removal, contrast enhancement). The most important step of the image processing is the segmentation of the image into meaningful objects. The segmentation task is a difficult one due to the lack of clarity of the acquired X-ray images and the resulting segmented image represents not only correctly identified foreign bodies but also areas caused by overlapping muscle regions in the meat which appear very similar to foreign bodies in the resulting x-ray image. A Hopfield neural network architecture was proposed for the segmentation of a X-ray dual-band image. A number of image processing measurements were made on each object (geometrical and grey-level based statistical features) and these features were used as the input into a fuzzy logic based high-level detection system whose function was to differentiate between bones and non-bone segmented regions. The results show that system's performance is considerably improved over non-fuzzy or crisp methods. Possible noise affecting the system is also investigated. The proposed system proved to be robust and flexible while achieving a high level of performance. Furthermore, it is possible to use the same approach when analysing images from other applications areas from the automotive industry to medicine

Participative Urban Health and Healthy Aging in the Age of AI

This open access book constitutes the refereed proceedings of the 18th International Conference on String Processing and Information Retrieval, ICOST 2022, held in Paris, France, in June 2022. The 15 full papers and 10 short papers presented in this volume were carefully reviewed and selected from 33 submissions. They cover topics such as design, development, deployment, and evaluation of AI for health, smart urban environments, assistive technologies, chronic disease management, and coaching and health telematics systems