Segmentation of images having unimodal distributions

Journal ArticleA gradient relaxation method based on maximizing a criterion function is studied and compared to the nonlinear probabilistic relaxation method for the purpose of segmentation of images having unimodal distributions. Although both methods provide comparable segmentation results, the gradient method has the additional advantage of providing control over the relaxation process by choosing three parameters which can be tuned to obtain the desired segmentation results at a faster rate. Examples are given on two different types of scenes

A single-chip FPGA implementation of real-time adaptive background model

This paper demonstrates the use of a single-chip FPGA for the extraction of highly accurate background models in real-time. The models are based on 24-bit RGB values and 8-bit grayscale intensity values. Three background models are presented, all using a camcorder, single FPGA chip, four blocks of RAM and a display unit. The architectures have been implemented and tested using a Panasonic NVDS60B digital video camera connected to a Celoxica RC300 Prototyping Platform with a Xilinx Virtex II XC2v6000 FPGA and 4 banks of onboard RAM. The novel FPGA architecture presented has the advantages of minimizing latency and the movement of large datasets, by conducting time critical processes on BlockRAM. The systems operate at clock rates ranging from 57MHz to 65MHz and are capable of performing pre-processing functions like temporal low-pass filtering on standard frame size of 640X480 pixels at up to 210 frames per second

Visual and Contextual Modeling for the Detection of Repeated Mild Traumatic Brain Injury.

Currently, there is a lack of computational methods for the evaluation of mild traumatic brain injury (mTBI) from magnetic resonance imaging (MRI). Further, the development of automated analyses has been hindered by the subtle nature of mTBI abnormalities, which appear as low contrast MR regions. This paper proposes an approach that is able to detect mTBI lesions by combining both the high-level context and low-level visual information. The contextual model estimates the progression of the disease using subject information, such as the time since injury and the knowledge about the location of mTBI. The visual model utilizes texture features in MRI along with a probabilistic support vector machine to maximize the discrimination in unimodal MR images. These two models are fused to obtain a final estimate of the locations of the mTBI lesion. The models are tested using a novel rodent model of repeated mTBI dataset. The experimental results demonstrate that the fusion of both contextual and visual textural features outperforms other state-of-the-art approaches. Clinically, our approach has the potential to benefit both clinicians by speeding diagnosis and patients by improving clinical care

Accuracy of MAP segmentation with hidden Potts and Markov mesh prior models via Path Constrained Viterbi Training, Iterated Conditional Modes and Graph Cut based algorithms

In this paper, we study statistical classification accuracy of two different Markov field environments for pixelwise image segmentation, considering the labels of the image as hidden states and solving the estimation of such labels as a solution of the MAP equation. The emission distribution is assumed the same in all models, and the difference lays in the Markovian prior hypothesis made over the labeling random field. The a priori labeling knowledge will be modeled with a) a second order anisotropic Markov Mesh and b) a classical isotropic Potts model. Under such models, we will consider three different segmentation procedures, 2D Path Constrained Viterbi training for the Hidden Markov Mesh, a Graph Cut based segmentation for the first order isotropic Potts model, and ICM (Iterated Conditional Modes) for the second order isotropic Potts model. We provide a unified view of all three methods, and investigate goodness of fit for classification, studying the influence of parameter estimation, computational gain, and extent of automation in the statistical measures Overall Accuracy, Relative Improvement and Kappa coefficient, allowing robust and accurate statistical analysis on synthetic and real-life experimental data coming from the field of Dental Diagnostic Radiography. All algorithms, using the learned parameters, generate good segmentations with little interaction when the images have a clear multimodal histogram. Suboptimal learning proves to be frail in the case of non-distinctive modes, which limits the complexity of usable models, and hence the achievable error rate as well. All Matlab code written is provided in a toolbox available for download from our website, following the Reproducible Research Paradigm

Investigating microstructural variation in the human hippocampus using non-negative matrix factorization

In this work we use non-negative matrix factorization to identify patterns of microstructural variance in the human hippocampus. We utilize high-resolution structural and diffusion magnetic resonance imaging data from the Human Connectome Project to query hippocampus microstructure on a multivariate, voxelwise basis. Application of non-negative matrix factorization identifies spatial components (clusters of voxels sharing similar covariance patterns), as well as subject weightings (individual variance across hippocampus microstructure). By assessing the stability of spatial components as well as the accuracy of factorization, we identified 4 distinct microstructural components. Furthermore, we quantified the benefit of using multiple microstructural metrics by demonstrating that using three microstructural metrics (T1-weighted/T2-weighted signal, mean diffusivity and fractional anisotropy) produced more stable spatial components than when assessing metrics individually. Finally, we related individual subject weightings to demographic and behavioural measures using a partial least squares analysis. Through this approach we identified interpretable relationships between hippocampus microstructure and demographic and behavioural measures. Taken together, our work suggests non-negative matrix factorization as a spatially specific analytical approach for neuroimaging studies and advocates for the use of multiple metrics for data-driven component analyses

Automated Coronal Hole Detection using Local Intensity Thresholding Techniques

We identify coronal holes using a histogram-based intensity thresholding technique and compare their properties to fast solar wind streams at three different points in the heliosphere. The thresholding technique was tested on EUV and X-ray images obtained using instruments onboard STEREO, SOHO and Hinode. The full-disk images were transformed into Lambert equal-area projection maps and partitioned into a series of overlapping sub-images from which local histograms were extracted. The histograms were used to determine the threshold for the low intensity regions, which were then classified as coronal holes or filaments using magnetograms from the SOHO/MDI. For all three instruments, the local thresholding algorithm was found to successfully determine coronal hole boundaries in a consistent manner. Coronal hole properties extracted using the segmentation algorithm were then compared with in situ measurements of the solar wind at 1 AU from ACE and STEREO. Our results indicate that flux tubes rooted in coronal holes expand super-radially within 1 AU and that larger (smaller) coronal holes result in longer (shorter) duration high-speed solar wind streams

Segmentation of complex outdoor scenes

Journal ArticleA new simpler approach to image segmentation via recursive region splitting and merging is presented. Unlike other techniques the kernel of splitting is based on a generalization of a two class gradient relaxation method and merging uses a statistical analysis of variance

A robust nonlinear scale space change detection approach for SAR images

In this paper, we propose a change detection approach based on nonlinear scale space analysis of change images for robust detection of various changes incurred by natural phenomena and/or human activities in Synthetic Aperture Radar (SAR) images using Maximally Stable Extremal Regions (MSERs). To achieve this, a variant of the log-ratio image of multitemporal images is calculated which is followed by Feature Preserving Despeckling (FPD) to generate nonlinear scale space images exhibiting different trade-offs in terms of speckle reduction and shape detail preservation. MSERs of each scale space image are found and then combined through a decision level fusion strategy, namely "selective scale fusion" (SSF), where contrast and boundary curvature of each MSER are considered. The performance of the proposed method is evaluated using real multitemporal high resolution TerraSAR-X images and synthetically generated multitemporal images composed of shapes with several orientations, sizes, and backscatter amplitude levels representing a variety of possible signatures of change. One of the main outcomes of this approach is that different objects having different sizes and levels of contrast with their surroundings appear as stable regions at different scale space images thus the fusion of results from scale space images yields a good overall performance