Type-driven automated program transformations and cost modelling for optimising streaming programs on FPGAs

In this paper we present a novel approach to program optimisation based on compiler-based type-driven program transformations and a fast and accurate cost/performance model for the target architecture. We target streaming programs for the problem domain of scientific computing, such as numerical weather prediction. We present our theoretical framework for type-driven program transformation, our target high-level language and intermediate representation languages and the cost model and demonstrate the effectiveness of our approach by comparison with a commercial toolchain

The hArtes Tool Chain

This chapter describes the different design steps needed to go from legacy code to a transformed application that can be efficiently mapped on the hArtes platform

OPTIMIZATION OF FPGA-BASED PROCESSOR ARCHITECTURE FOR SOBEL EDGE DETECTION OPERATOR

This dissertation introduces an optimized processor architecture for Sobel edge detection operator on field programmable gate arrays (FPGAs). The processor is optimized by the use of several optimization techniques that aim to increase the processor throughput and reduce the processor logic utilization and memory usage. FPGAs offer high levels of parallelism which is exploited by the processor to implement the parallel process of edge detection in order to increase the processor throughput and reduce the logic utilization. To achieve this, the proposed processor consists of several Sobel instances that are able to produce multiple output pixels in parallel. This parallelism enables data reuse within the processor block. Moreover, the processor gains performance with a factor equal to the number of instances contained in the processor block. The processor that consists of one row of Sobel instances exploits data reuse within one image line in the calculations of the horizontal gradient. Data reuse within one and multiple image lines is enabled by using a processor with multiple rows of Sobel instances which allow the reuse of both the horizontal and vertical gradients. By the application of the optimization techniques, the proposed Sobel processor is able to meet real-time performance constraints due to its high throughput even with a considerably low clock frequency. In addition, logic utilization of the processor is low compared to other Sobel processors when implemented on ALTERA Cyclone II DE2-70

High-Level Synthesis Hardware Design for FPGA-Based Accelerators: Models, Methodologies, and Frameworks

Hardware accelerators based on field programmable gate array (FPGA) and system on chip (SoC) devices have gained attention in recent years. One of the main reasons is that these devices contain reconfigurable logic, which makes them feasible for boosting the performance of applications. High-level synthesis (HLS) tools facilitate the creation of FPGA code from a high level of abstraction using different directives to obtain an optimized hardware design based on performance metrics. However, the complexity of the design space depends on different factors such as the number of directives used in the source code, the available resources in the device, and the clock frequency. Design space exploration (DSE) techniques comprise the evaluation of multiple implementations with different combinations of directives to obtain a design with a good compromise between different metrics. This paper presents a survey of models, methodologies, and frameworks proposed for metric estimation, FPGA-based DSE, and power consumption estimation on FPGA/SoC. The main features, limitations, and trade-offs of these approaches are described. We also present the integration of existing models and frameworks in diverse research areas and identify the different challenges to be addressed

Combining dynamic and static scheduling in high-level synthesis

Field Programmable Gate Arrays (FPGAs) are starting to become mainstream devices for custom computing, particularly deployed in data centres. However, using these FPGA devices requires familiarity with digital design at a low abstraction level. In order to enable software engineers without a hardware background to design custom hardware, high-level synthesis (HLS) tools automatically transform a high-level program, for example in C/C++, into a low-level hardware description. A central task in HLS is scheduling: the allocation of operations to clock cycles. The classic approach to scheduling is static, in which each operation is mapped to a clock cycle at compile time, but recent years have seen the emergence of dynamic scheduling, in which an operation’s clock cycle is only determined at run-time. Both approaches have their merits: static scheduling can lead to simpler circuitry and more resource sharing, while dynamic scheduling can lead to faster hardware when the computation has a non-trivial control flow. This thesis proposes a scheduling approach that combines the best of both worlds. My idea is to use existing program analysis techniques in software designs, such as probabilistic analysis and formal verification, to optimize the HLS hardware. First, this thesis proposes a tool named DASS that uses a heuristic-based approach to identify the code regions in the input program that are amenable to static scheduling and synthesises them into statically scheduled components, also known as static islands, leaving the top-level hardware dynamically scheduled. Second, this thesis addresses a problem of this approach: that the analysis of static islands and their dynamically scheduled surroundings are separate, where one treats the other as black boxes. We apply static analysis including dependence analysis between static islands and their dynamically scheduled surroundings to optimize the offsets of static islands for high performance. We also apply probabilistic analysis to estimate the performance of the dynamically scheduled part and use this information to optimize the static islands for high area efficiency. Finally, this thesis addresses the problem of conservatism in using sequential control flow designs which can limit the throughput of the hardware. We show this challenge can be solved by formally proving that certain control flows can be safely parallelised for high performance. This thesis demonstrates how to use automated formal verification to find out-of-order loop pipelining solutions and multi-threading solutions from a sequential program.Open Acces

Automatic Creation of High-Bandwidth Memory Architectures from Domain-Specific Languages: The Case of Computational Fluid Dynamics

Numerical simulations can help solve complex problems. Most of these algorithms are massively parallel and thus good candidates for FPGA acceleration thanks to spatial parallelism. Modern FPGA devices can leverage high-bandwidth memory technologies, but when applications are memory-bound designers must craft advanced communication and memory architectures for efficient data movement and on-chip storage. This development process requires hardware design skills that are uncommon in domain-specific experts. In this paper, we propose an automated tool flow from a domain-specific language (DSL) for tensor expressions to generate massively-parallel accelerators on HBM-equipped FPGAs. Designers can use this flow to integrate and evaluate various compiler or hardware optimizations. We use computational fluid dynamics (CFD) as a paradigmatic example. Our flow starts from the high-level specification of tensor operations and combines an MLIR-based compiler with an in-house hardware generation flow to generate systems with parallel accelerators and a specialized memory architecture that moves data efficiently, aiming at fully exploiting the available CPU-FPGA bandwidth. We simulated applications with millions of elements, achieving up to 103 GFLOPS with one compute unit and custom precision when targeting a Xilinx Alveo U280. Our FPGA implementation is up to 25x more energy efficient than expert-crafted Intel CPU implementations

Parallelization of dynamic programming recurrences in computational biology

The rapid growth of biosequence databases over the last decade has led to a performance bottleneck in the applications analyzing them. In particular, over the last five years DNA sequencing capacity of next-generation sequencers has been doubling every six months as costs have plummeted. The data produced by these sequencers is overwhelming traditional compute systems. We believe that in the future compute performance, not sequencing, will become the bottleneck in advancing genome science. In this work, we investigate novel computing platforms to accelerate dynamic programming algorithms, which are popular in bioinformatics workloads. We study algorithm-specific hardware architectures that exploit fine-grained parallelism in dynamic programming kernels using field-programmable gate arrays: FPGAs). We advocate a high-level synthesis approach, using the recurrence equation abstraction to represent dynamic programming and polyhedral analysis to exploit parallelism. We suggest a novel technique within the polyhedral model to optimize for throughput by pipelining independent computations on an array. This design technique improves on the state of the art, which builds latency-optimal arrays. We also suggest a method to dynamically switch between a family of designs using FPGA reconfiguration to achieve a significant performance boost. We have used polyhedral methods to parallelize the Nussinov RNA folding algorithm to build a family of accelerators that can trade resources for parallelism and are between 15-130x faster than a modern dual core CPU implementation. A Zuker RNA folding accelerator we built on a single workstation with four Xilinx Virtex 4 FPGAs outperforms 198 3 GHz Intel Core 2 Duo processors. Furthermore, our design running on a single FPGA is an order of magnitude faster than competing implementations on similar-generation FPGAs and graphics processors. Our work is a step toward the goal of automated synthesis of hardware accelerators for dynamic programming algorithms