Wireless Broadcast with Network Coding in Mobile Ad-Hoc Networks: DRAGONCAST

Network coding is a recently proposed method for transmitting data, which has been shown to have potential to improve wireless network performance. We study network coding for one specific case of multicast, broadcasting, from one source to all nodes of the network. We use network coding as a loss tolerant, energy-efficient, method for broadcast. Our emphasis is on mobile networks. Our contribution is the proposal of DRAGONCAST, a protocol to perform network coding in such a dynamically evolving environment. It is based on three building blocks: a method to permit real-time decoding of network coding, a method to adjust the network coding transmission rates, and a method for ensuring the termination of the broadcast. The performance and behavior of the method are explored experimentally by simulations; they illustrate the excellent performance of the protocol

Solution of partial differential equations on vector and parallel computers

The present status of numerical methods for partial differential equations on vector and parallel computers was reviewed. The relevant aspects of these computers are discussed and a brief review of their development is included, with particular attention paid to those characteristics that influence algorithm selection. Both direct and iterative methods are given for elliptic equations as well as explicit and implicit methods for initial boundary value problems. The intent is to point out attractive methods as well as areas where this class of computer architecture cannot be fully utilized because of either hardware restrictions or the lack of adequate algorithms. Application areas utilizing these computers are briefly discussed

Integrated Development and Parallelization of Automated Dicentric Chromosome Identification Software to Expedite Biodosimetry Analysis

Manual cytogenetic biodosimetry lacks the ability to handle mass casualty events. We present an automated dicentric chromosome identification (ADCI) software utilizing parallel computing technology. A parallelization strategy combining data and task parallelism, as well as optimization of I/O operations, has been designed, implemented, and incorporated in ADCI. Experiments on an eight-core desktop show that our algorithm can expedite the process of ADCI by at least four folds. Experiments on Symmetric Computing, SHARCNET, Blue Gene/Q multi-processor computers demonstrate the capability of parallelized ADCI to process thousands of samples for cytogenetic biodosimetry in a few hours. This increase in speed underscores the effectiveness of parallelization in accelerating ADCI. Our software will be an important tool to handle the magnitude of mass casualty ionizing radiation events by expediting accurate detection of dicentric chromosomes

Architecture independent environment for developing engineering software on MIMD computers

Engineers are constantly faced with solving problems of increasing complexity and detail. Multiple Instruction stream Multiple Data stream (MIMD) computers have been developed to overcome the performance limitations of serial computers. The hardware architectures of MIMD computers vary considerably and are much more sophisticated than serial computers. Developing large scale software for a variety of MIMD computers is difficult and expensive. There is a need to provide tools that facilitate programming these machines. First, the issues that must be considered to develop those tools are examined. The two main areas of concern were architecture independence and data management. Architecture independent software facilitates software portability and improves the longevity and utility of the software product. It provides some form of insurance for the investment of time and effort that goes into developing the software. The management of data is a crucial aspect of solving large engineering problems. It must be considered in light of the new hardware organizations that are available. Second, the functional design and implementation of a software environment that facilitates developing architecture independent software for large engineering applications are described. The topics of discussion include: a description of the model that supports the development of architecture independent software; identifying and exploiting concurrency within the application program; data coherence; engineering data base and memory management

Parallel implementation of the finite element method on shared memory multiprocessors

PhD ThesisThe work presented in this thesis concerns parallel methods for finite element analysis. The research has been funded by British Gas and some of the presented material involves work on their software. Practical problems involving the finite element method can use a large amount of processing power and the execution times can be very large. It is consequently important to investigate the possibilities for the parallel implementation of the method. The research has been carried out on an Encore Multimax, a shared memory multiprocessor with 14 identical CPU's. We firstly experimented on autoparallelising a large British Gas finite element program (GASP4) using Encore's parallelising Fortran compiler (epf). The par- allel program generated by epj proved not to be efficient. The main reasons are the complexity of the code and small grain parallelism. Since the program is hard to analyse for the compiler at high levels, only small grain parallelism has been inserted automatically into the code. This involves a great deal of low level syn- chronisations which produce large overheads and cause inefficiency. A detailed analysis of the autoparallelised code has been made with a view to determining the reasons for the inefficiency. Suggestions have also been made about writing programs such that they are suitable for efficient autoparallelisation. The finite element method consists of the assembly of a stiffness matrix and the solution of a set of simultaneous linear equations. A sparse representation of the stiffness matrix has been used to allow experimentation on large problems. Parallel assembly techniques for the sparse representation have been developed. Some of these methods have proved to be very efficient giving speed ups that are near ideal. For the solution phase, we have used the preconditioned conjugate gradient method (PCG). An incomplete LU factorization ofthe stiffness matrix with no fill- in (ILU(O)) has been found to be an effective preconditioner. The factors can be obtained at a low cost. We have parallelised all the steps of the PCG method. The main bottleneck is the triangular solves (preconditioning operations) at each step. Two parallel methods of triangular solution have been implemented. One is based on level scheduling (row-oriented parallelism) and the other is a new approach called independent columns (column-oriented parallelism). The algorithms have been tested for row and red-black orderings of the nodal unknowns in the finite element meshes considered. The best speed ups obtained are 7.29 (on 12 processors) for level scheduling and 7.11 (on 12 processors) for independent columns. Red-black ordering gives rise to better parallel performance than row ordering in general. An analysis of methods for the improvement of the parallel efficiency has been made.British Ga

Implementing multifrontal sparse solvers for multicore architectures with Sequential Task Flow runtime systems

International audienceTo face the advent of multicore processors and the ever increasing complexity of hardware architectures, programming models based on DAG parallelism regained popularity in the high performance, scientific computing community. Modern runtime systems offer a programming interface that complies with this paradigm and powerful engines for scheduling the tasks into which the application is decomposed. These tools have already proved their effectiveness on a number of dense linear algebra applications. This paper evaluates the usability and effectiveness of runtime systems based on the Sequential Task Flow model for complex applications , namely, sparse matrix multifrontal factorizations which feature extremely irregular workloads, with tasks of different granularities and characteristics and with a variable memory consumption. Most importantly, it shows how this parallel programming model eases the development of complex features that benefit the performance of sparse, direct solvers as well as their memory consumption. We illustrate our discussion with the multifrontal QR factorization running on top of the StarPU runtime system. ACM Reference Format: Emmanuel Agullo, Alfredo Buttari, Abdou Guermouche and Florent Lopez, 2014. Implementing multifrontal sparse solvers for multicore architectures with Sequential Task Flow runtime system

Parallel solution of power system linear equations

At the heart of many power system computations lies the solution of a large sparse set of linear equations. These equations arise from the modelling of the network and are the cause of a computational bottleneck in power system analysis applications. Efficient sequential techniques have been developed to solve these equations but the solution is still too slow for applications such as real-time dynamic simulation and on-line security analysis. Parallel computing techniques have been explored in the attempt to find faster solutions but the methods developed to date have not efficiently exploited the full power of parallel processing. This thesis considers the solution of the linear network equations encountered in power system computations. Based on the insight provided by the elimination tree, it is proposed that a novel matrix structure is adopted to allow the exploitation of parallelism which exists within the cutset of a typical parallel solution. Using this matrix structure it is possible to reduce the size of the sequential part of the problem and to increase the speed and efficiency of typical LU-based parallel solution. A method for transforming the admittance matrix into the required form is presented along with network partitioning and load balancing techniques. Sequential solution techniques are considered and existing parallel methods are surveyed to determine their strengths and weaknesses. Combining the benefits of existing solutions with the new matrix structure allows an improved LU-based parallel solution to be derived. A simulation of the improved LU solution is used to show the improvements in performance over a standard LU-based solution that result from the adoption of the new techniques. The results of a multiprocessor implementation of the method are presented and the new method is shown to have a better performance than existing methods for distributed memory multiprocessors